Contig 003304:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051O13+                                                            AGATTATGCCA
                      ____________________________________________________________
consensus                                                              AGATTATGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF051O13+           ATTAGAAATTATCTAAAATTTCCTCATTCCTCACAGAATAATACAGACATACTGTTTACA
                      ____________________________________________________________
consensus             ATTAGAAATTATCTAAAATTTCCTCATTCCTCACAGAATAATACAGACATACTGTTTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+                     ATCATCATGTATAATCAACCATTATATTCCCCTTCTGAAAACCAGGGAAC
JMFF051O13+           TATGACAAGAATCATCATGTATAATCAACCATTATATTCCCCTTCTGAAAACCAGGGAAC
                      ____________________________________________________________
consensus             TATGACAAGAATCATCATGTATAATCAACCATTATATTCCCCTTCTGAAAACCAGGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           ATTTGTTGCTTCAGCAACTAAATGAATAACGAATCCTCCCTNTAATTCATCTTCCATTAT
JMFF051O13+           ATTTGTTGCTTCAGCAACTAAATGAATAACGAATCCTCCCTCTAATTCATCTTCCATTAT
                      ____________________________________________________________
consensus             ATTTGTTGCTTCAGCAACTAAATGAATAACGAATCCTCCCTCTAATTCATCTTCCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           CAAAAATTTCCTCATTCCTCATTCCTCATTTGAGAATAGCTAAATAAAAAATTATCAGAT
JMFF051O13+           CAAAAATTTCCTCATTCCTCATTCCTCATTTGAGAATAGCTAAATAAAAAATTATCAGAT
                      ____________________________________________________________
consensus             CAAAAATTTCCTCATTCCTCATTCCTCATTTGAGAATAGCTAAATAAAAAATTATCAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           TATGCCTAAATTCAATCAAATTAGGATTTAGGGCAAACATAAATCAAATTAGGATTTAGG
JMFF051O13+           TATGCCTAAATTCAATCAAATTAGGATTTAGGGCAAACATAAATCAAATTAGGATTTAGG
                      ____________________________________________________________
consensus             TATGCCTAAATTCAATCAAATTAGGATTTAGGGCAAACATAAATCAAATTAGGATTTAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           GCAAGAATTGAACATTTGAACATAAATTAAACCAGCAAATTAAAGCAAATTAAACAAACA
JMFF051O13+           GCAAGAATTGAACATTTGAACATAAATTAAACCAGCAAATTAAAGCAAATTAAACAAACA
                      ____________________________________________________________
consensus             GCAAGAATTGAACATTTGAACATAAATTAAACCAGCAAATTAAAGCAAATTAAACAAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           AAGGGTGAGAACTGAGAAGGACGGAGAACGGAGACACGGAGTTGAACCTTACCTGGCGGC
JMFF051O13+           AAGGGTGAGAACTGAGAAGGACGGAGAACGGAGACACGGAGTTGAACCTTACCTGGCGGC
                      ____________________________________________________________
consensus             AAGGGTGAGAACTGAGAAGGACGGAGAACGGAGACACGGAGTTGAACCTTACCTGGCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           TGGCAGTTGCGACTTTGCGAGGCAACGGAGTGGTGGGCGGTGGCGCTGAAGAGGCTGAGG
JMFF051O13+           TGGCAGTTGCGACTTTGCGAGGCAACGGAGTGGTGGGCGGTGGCGCTGAAGAGGCTGAGG
                      ____________________________________________________________
consensus             TGGCAGTTGCGACTTTGCGAGGCAACGGAGTGGTGGGCGGTGGCGCTGAAGAGGCTGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           GCAGACGGCGACGGGAGGCAGAGAGCGACGAGAAGTCCGGCAGAGACGAGAGGTGAGTGG
JMFF051O13+           GCAGACGGCGACGGGAGGCAGAGAGCGACGAGAAGTCCGGCAGAGACGAGAGGTGAGTGG
                      ____________________________________________________________
consensus             GCAGACGGCGACGGGAGGCAGAGAGCGACGAGAAGTCCGGCAGAGACGAGAGGTGAGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF029N04+           CTGAGAGAGACCGCAAACGGAAGAGAAGAGAAGAACGGTGGTGGACTGG           
JMFF051O13+           CTGAGAGAGACCGCAAACGGAAGAGAAGAGAAGAACGGTGGTGGACTGGGGCGTTTCACC
                      ____________________________________________________________
consensus             CTGAGAGAGACCGCAAACGGAAGAGAAGAGAAGAACGGTGGTGGACTGGGGCGTTTCACC