Contig 003302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051M23Sequence549003302 (3)ref|XP_009597336.1|3e-49PREDICTED: strictosidine synthase 1-like [Nicotiana tomentosiformis]422003302 (3)ref|XP_004252261.1|1e-07PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]
JMFN006C13Sequence627003302 (3)ref|XP_004236090.1|2e-38PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF051M23-                                                TTTATTATTACGACTCTGAAAA
                      ____________________________________________________________
consensus                                                   TTTATTATTACGACTCTGAAAA
 
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rJMFF051M23-          CACAAGTTGTAAAAAATATACCCTGATTTAGGACTCCATGCATGGAGGTTGACATTATAT
JMFN006C13+                                             TCCATGCATGTAGGTTGACATTATAT
                      ____________________________________________________________
consensus             CACAAGTTGTAAAAAATATACCCTGATTTAGGACTCCATGCATGTAGGTTGACATTATAT
 
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rJMFF051M23-          AATTAGGATTGGCGAAGCGTGAAAACAAACATCATTTGATAAACTTTATCGATCATGCCC
JMFN006C13+           AATTAGGATTGGCGAAGCGTGAAGACAAACATCATTTGATAGACTTTATCGATCATGCCC
                      ____________________________________________________________
consensus             AATTAGGATTGGCGAAGCGTGAAGACAAACATCATTTGATAGACTTTATCGATCATGCCC
 
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rJMFF051M23-          TATAAACACCAACAAAGTCCCCCTCCAATGACCCGGTATAAGCTTTACCGAAGTATTCAA
JMFN006C13+           TATAGACACCAACAAAGTCCGCCTCCAATGACCCGGTATAAGCTTTACCGAAGTATTCAA
                      ____________________________________________________________
consensus             TATAGACACCAACAAAGTCCGCCTCCAATGACCCGGTATAAGCTTTACCGAAGTATTCAA
 
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rJMFF051M23-          AATAGGAACCCAGCAACTTAGGATAATCTTTAGTTAAATTCCCCGTCCCCAAAATCTTGC
JMFN006C13+           AATAGGAACCAAGCAACTTAGGATAATCTTTAGTTAGATTCCTCGTCTCCAAAATCTTGC
                      ____________________________________________________________
consensus             AATAGGAACCCAGCAACTTAGGATAATCTTTAGTTAGATTCCTCGTCTCCAAAATCTTGC
 
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rJMFF051M23-          CGTTCCTGTCGAACTTCACTGCAATGGAGTCCGTCATAGGGGAAGGCTGCTGCTCCCTAG
JMFN006C13+           CGTTCCTGTCGAACTTCACTGCAATGGAGTCCGTCATAGGGGAAGGCTGCTGCTCCCTAG
                      ____________________________________________________________
consensus             CGTTCCTGTCGAACTTCACTGCAATGGAGTCCGTCATAGGGGAAGGCTGCTGCTCCCTAG
 
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rJMFF051M23-          GGGTGTTCACAGGCACCCAAAAACCACCCGACAACGACGTTGCCCTCTTCACAAATTCTG
JMFN006C13+           GGGTGTTCACAGGCACCCAAAAACCACCCGACAACGACGTTGCCCTCTTCACGAATTCTG
                      ____________________________________________________________
consensus             GGGTGTTCACAGGCACCCAAAAACCACCCGACAACGACGTTGCCCTCTTCACGAATTCTG
 
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rJMFF051M23-          GATTTCCTCCGAGGTTTTCCAGTACTGTCTCAGTTGTTTT                    
JMFN006C13+           GATTTCCTCCGAGGTTTTCGAGTACTGTCTCAGTTGTTTTAGCCTTTGGACCTCTGATGT
                      ____________________________________________________________
consensus             GATTTCCTCCGAGGTTTTCGAGTACTGTCTCAGTTGTTTTAGCCTTTGGACCTCTGATGT
 
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JMFN006C13+           AATGCTTGATAATCTTGCGTCCGATGAACAAAGTGATGAAGATGAAGGTATGATCTTCGC
                      ____________________________________________________________
consensus             AATGCTTGATAATCTTGCGTCCGATGAACAAAGTGATGAAGATGAAGGTATGATCTTCGC
 
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JMFN006C13+           TGATTGCATTGCCGACTGGCCCCGCCAGCCCGGTAAGCACCTCCGTCACCTGTCCCGTCG
                      ____________________________________________________________
consensus             TGATTGCATTGCCGACTGGCCCCGCCAGCCCGGTAAGCACCTCCGTCACCTGTCCCGTCG
 
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JMFN006C13+           CCGCCTCGTACTTTAGTAGTCTCCCTGACGTGTCTCCGCTCTGCGCAATTCGTGCAAAGT
                      ____________________________________________________________
consensus             CCGCCTCGTACTTTAGTAGTCTCCCTGACGTGTCTCCGCTCTGCGCAATTCGTGCAAAGT
 
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JMFN006C13+           CGTTTGTTAGGAATATCTCGCCGGATTCGACGAAATATGCGTCCCCAGTTAATTGATCCA
JMFF051M23+                  TAGGAATATCTCGCCGGATTCGACGAAATATGCGTCCCCAGTTAATTGATCCA
                      ____________________________________________________________
consensus             CGTTTGTTAGGAATATCTCGCCGGATTCGACGAAATATGCGTCCCCAGTTAATTGATCCA
 
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JMFN006C13+           A                                                           
JMFF051M23+           AGGATACAGAGTCTGCAAAGATGAAATTTTTGCCGTTTATGCCGGCGGCTAGCTGCTTTG
                      ____________________________________________________________
consensus             AGGATACAGAGTCTGCAAAGATGAAATTTTTGCCGTTTATGCCGGCGGCTAGCTGCTTTG
 
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JMFF051M23+           CAAGCCCACCATTTGATCCGACTCTTAAAAGCCCGAAATGAATGTCAGCAATATAGAGAT
                      ____________________________________________________________
consensus             CAAGCCCACCATTTGATCCGACTCTTAAAAGCCCGAAATGAATGTCAGCAATATAGAGAT
 
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JMFF051M23+           CACCAGTGCGACGATTAAAGTCAAGACCTAAGGGTCTTCCACATATGCTTAGTAAATTTG
                      ____________________________________________________________
consensus             CACCAGTGCGACGATTAAAGTCAAGACCTAAGGGTCTTCCACATATGCTTAGTAAATTTG
 
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JMFF051M23+           TGCCGTTGGTTCCATCACATTTTTCCTTGGTCCTAAAAGGTGACGTGATGGCGAAATCCA
                      ____________________________________________________________
consensus             TGCCGTTGGTTCCATCACATTTTTCCTTGGTCCTAAAAGGTGACGTGATGGCGAAATCCA
 
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JMFF051M23+           CAAAATTTCCATTGGAAAATTTGAGAATTCTGCCATCTCTAACCCCCGTATAAGGTCCTC
                      ____________________________________________________________
consensus             CAAAATTTCCATTGGAAAATTTGAGAATTCTGCCATCTCTAACCCCCGTATAAGGTCCTC
 
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JMFF051M23+           CGCCTCTTGGATCAAAAGCTGTGTCTTTCGGACCAAAAGCGTTTTGAAGTTTGAGCTTCG
                      ____________________________________________________________
consensus             CGCCTCTTGGATCAAAAGCTGTGTCTTTCGGACCAAAAGCGTTTTGAAGTTTGAGCTTCG
 
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JMFF051M23+           CTATTAAATCTCTTTCAGGATGAGAATGGATCATACAAAGAGAGGAAATGAACATTAGCA
                      ____________________________________________________________
consensus             CTATTAAATCTCTTTCAGGATGAGAATGGATCATACAAAGAGAGGAAATGAACATTAGCA
 
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JMFF051M23+           TGGAAACCCAGAACATGGTTAGTGATTTCATATTGGTAGTACTATACATGGGTTGAGAAT
                      ____________________________________________________________
consensus             TGGAAACCCAGAACATGGTTAGTGATTTCATATTGGTAGTACTATACATGGGTTGAGAAT