| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J04 | Sequence | 563 | 003294 (7) | ref|XP_009764855.1| | 239 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | 672 | 001238 (3) | emb|CDO99929.1| | 2e-18 | unnamed protein product [Coffea canephora] |
| JMFF038P20 | Sequence | 563 | 003294 (7) | ref|XP_009764855.1| | 239 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | 657 | 001238 (3) | emb|CDO99929.1| | 8e-34 | unnamed protein product [Coffea canephora] |
| JMFF050C04 | Sequence | 607 | 003294 (7) | ref|XP_009764855.1| | 269 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | 593 | 001238 (3) | emb|CDO99929.1| | 6e-05 | unnamed protein product [Coffea canephora] |
| JMFS026B01 | Sequence | 642 | 003294 (7) | ref|XP_009764855.1| | 304 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | |||||
| JMFS142E05 | Sequence | 624 | 003294 (7) | ref|XP_009764855.1| | 293 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | |||||
| JMFS160F02 | Sequence | 529 | 003294 (7) | ref|XP_009764855.1| | 207 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | |||||
| JMFS166F02 | Sequence | 620 | 003294 (7) | ref|XP_009764855.1| | 290 | PREDICTED: uncharacterized protein LOC104216499 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS026B01+ CATTGGT
____________________________________________________________
consensus CATTGGT
. : . : . : . : . : . :
JMFS142E05+ AAAACCCGGCTTCCCTCATCACTCTACTCACACTGGGGTCATC
JMFS026B01+ TTTCACCTGGCTACTCGAAAACCCGGCTTCCCTCATCACTCTACTCACACTGGGGTCATC
JMFS166F02+ CCCGGCTTCCCTCATCACTCTACTCACACTGGGGTCATC
JMFF050C04+ GGGTCATC
____________________________________________________________
consensus TTTCACCTGGCTACTCGAAAACCCGGCTTCCCTCATCACTCTACTCACACTGGGGTCATC
. : . : . : . : . : . :
JMFS142E05+ AAGAATGGATATTACTAGCTGCTCAACCTCCACCTTCAAGGCTAGAATAGGCTGCTGCTG
JMFS026B01+ AAGAATGGATATTACTAGCTGCTCAACCTCCACCTTCAAGGCTAGAATAGGCTGCTGCTG
JMFS166F02+ AAGAATGGATATTACTAGCTGCTCAACCTCCACCTTCAAGGCTAGAATAGGCTGCTGCTG
JMFF038P20+ CAAGGCTAGAATAGGCTGCTGCTG
JMFF004J04+ CAAGGCTAGAATAGGCTGCTGCTG
JMFS160F02+ TAGGCTGCTGCTG
JMFF050C04+ AAGAATGGATATTACTAGCTGCTCAACCTCCACCTTCAAGGCTAGAATAGGCTGCTGCTG
____________________________________________________________
consensus AAGAATGGATATTACTAGCTGCTCAACCTCCACCTTCAAGGCTAGAATAGGCTGCTGCTG
. : . : . : . : . : . :
JMFS142E05+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFS026B01+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFS166F02+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFF038P20+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFF004J04+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFS160F02+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
JMFF050C04+ ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
____________________________________________________________
consensus ATTCTCTATTGACCCTCTTCTCTGATGAGCCTGAGCACGCTTAAAGGCGGCCACGAGGGC
. : . : . : . : . : . :
JMFS142E05+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFS026B01+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFS166F02+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFF038P20+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFF004J04+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFS160F02+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
JMFF050C04+ GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
____________________________________________________________
consensus GTTGGAGAGGGAAGGGAGGTGGGAATGGGGGCCTAGAATGGGGTTGGAAGAGGAAGTTGG
. : . : . : . : . : . :
JMFS142E05+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFS026B01+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFS166F02+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFF038P20+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFF004J04+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFS160F02+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
JMFF050C04+ GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
____________________________________________________________
consensus GAGGCGGTTGAGGGCGACATTAAAGCACAGCTCAAGAGCTTTGCACTGGAGAGGGTGAGA
. : . : . : . : . : . :
JMFS142E05+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFS026B01+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFS166F02+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFF038P20+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFF004J04+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFS160F02+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
JMFF050C04+ GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
____________________________________________________________
consensus GTGGGAATGGAGGCAAGCTCTTCTGAACAGCCCAGAAGAAGAAGCCAGCATTGCACTAGC
. : . : . : . : . : . :
JMFS142E05+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFS026B01+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFS166F02+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFF038P20+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFF004J04+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFS160F02+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
JMFF050C04+ TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
____________________________________________________________
consensus TACATGGAGAGGAGTGACATGGGAGTGGCCTCTCCTTCTAGCTAAGCTCATTGCCTGCCT
. : . : . : . : . : . :
JMFS142E05+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFS026B01+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFS166F02+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFF038P20+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFF004J04+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFS160F02+ CACAATGCCTGCAGATTCACGCTGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
JMFF050C04+ CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
____________________________________________________________
consensus CACAATGCCTGCAGATTCATG-TGTTAGTGACTGCTGGAAGGTATAGCCACCAGTCCTCA
. : . : . : . : . : . :
JMFS142E05+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFS026B01+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFS166F02+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFF038P20+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFF004J04+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFS160F02+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
JMFF050C04+ TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
____________________________________________________________
consensus TCTTATATATTAATTCTGAGTTTCAATTCTCTCTTTTGGTTTCAAGAATCAAGAACTGAT
. : . : . : . : . : . :
JMFS142E05+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
JMFS026B01+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
JMFS166F02+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
JMFF038P20+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
JMFF004J04+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
JMFS160F02+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGACGGGTTTAG
JMFF050C04+ CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
____________________________________________________________
consensus CTAGTGTGGTGTTTCAAGAAAGAGACCAGATGTTGATGATGATGAGAAGGAGGGGTTTAG
. : . : . : . : . : . :
JMFS142E05+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAA
JMFS026B01+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAG
JMFS166F02+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAGAGACTA
JMFF038P20+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAGAGACTAGTGATGAGTTCAGATTAT
JMFF004J04+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAGAGACTAGTGATGAGTTCAGATTAT
JMFS160F02+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAG
JMFF050C04+ GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAGAGACTAGTGATGAGTTCAGATTAT
____________________________________________________________
consensus GATGATTCTTGAATTTCATAGGGAATTTCAAGAAAGAGACTAGTGATGAGTTCAGATTAT