Contig 003293:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028L08Sequence590003293 (6)ref|XP_009796944.1|5e-65PREDICTED: protein-tyrosine-phosphatase PTP1-like [Nicotiana sylvestris]672003293 (6)emb|CDP18155.1|1e-62unnamed protein product [Coffea canephora]
JMFF050B17Sequence641003293 (6)ref|XP_009796944.1|9e-70PREDICTED: protein-tyrosine-phosphatase PTP1-like [Nicotiana sylvestris]565003293 (6)ref|XP_009796944.1|2e-30PREDICTED: protein-tyrosine-phosphatase PTP1-like [Nicotiana sylvestris]
JMSF046D04Sequence773003293 (6)ref|XP_009796944.1|6e-106PREDICTED: protein-tyrosine-phosphatase PTP1-like [Nicotiana sylvestris]784003293 (6)emb|CDP18155.1|5e-87unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF050B17- CTTTTTTTTTAAGTCATTTTAGATTTTTATTTCATGGAG
rJMFF028L08- TGGAG
                      ____________________________________________________________
consensus CTTTTTTTTTAAGTCATTTTAGATTTTTATTTCATGGAG
 
. : . : . : . : . : . :
rJMFF050B17- CATTTTGAAAAGTGTTTATAGGAGAGGTACAAATTACTGCCTTCTTTAAATATCAAAAAC
rJMFF028L08- CATTTTGAAAAGTGTTTATAGGAGAGGTACAAATTACTGCCTTCTTTAAATATCAAAAAC
rJMSF046D04- AAAGTGTTTATAGGAGAGGTACAAATTACTGCCTTCTTTAAATATCAAAAAC
                      ____________________________________________________________
consensus CATTTTGAAAAGTGTTTATAGGAGAGGTACAAATTACTGCCTTCTTTAAATATCAAAAAC
 
. : . : . : . : . : . :
rJMFF050B17- AATTTTATCCATGCCAGAGTAAAAATGCATGAGCATCTCAATAAGTTCCAGCTCTGGAAA
rJMFF028L08- AATTTTATCCATGCCAGAGTAAAAATGCATGAGCATCTCAATAAGTTCCAGCTCTGGAAA
rJMSF046D04- AATTTTATCCATGCCAGAGTAAAAATGCATGAGCATCTCAATAAGTTCCAGCTCTGGAAA
                      ____________________________________________________________
consensus AATTTTATCCATGCCAGAGTAAAAATGCATGAGCATCTCAATAAGTTCCAGCTCTGGAAA
 
. : . : . : . : . : . :
rJMFF050B17- TTTTATATTTAGAGAATAAAGGACTGTTTTGATCACAGTTTCATGTCTCTGGCCAAGCAG
rJMFF028L08- TTTTATATTTAGAGAATAAAGGACTGTTTTGATCACAGTTTCATGTCTCTGGCCAAGCAG
rJMSF046D04- TTTTATATTTAGAGAATAAAGGACTGTTTTGATCACAGTTTCATGTCTCTGGCCAAGCAG
                      ____________________________________________________________
consensus TTTTATATTTAGAGAATAAAGGACTGTTTTGATCACAGTTTCATGTCTCTGGCCAAGCAG
 
. : . : . : . : . : . :
rJMFF050B17- ACCCAGAACTGGACAAAACTCCGCGATAATGATACCACACATCTTCAGCTCAACTTGTTG
rJMFF028L08- ACCCAGAACTGGACAAAACTCCGCGATAATGATACCACACATCTTCAGCTCAACTTGTTG
rJMSF046D04- ACCCAGAACTGGACAAAACTCCGCGATAATGATACCACACATCTTCAGCTCAACTTGTTG
                      ____________________________________________________________
consensus ACCCAGAACTGGACAAAACTCCGCGATAATGATACCACACATCTTCAGCTCAACTTGTTG
 
. : . : . : . : . : . :
rJMFF050B17- CTTCATTCCCAGGGGAAGAAGGCACGATTGGGCTACGAAGAAGCTTCAACTTCTACTTGA
rJMFF028L08- CTTCATTCCCAGGGGAAGAAGGCACGATTGGGCTACGAAGAAGCTTCAACTTCTACTTGA
rJMSF046D04- CTTCATTCCCAGGGGAAGAAGGCACGATTGGGCTACGAAGAAGCTTCAACTTCTACTTGA
                      ____________________________________________________________
consensus CTTCATTCCCAGGGGAAGAAGGCACGATTGGGCTACGAAGAAGCTTCAACTTCTACTTGA
 
. : . : . : . : . : . :
rJMFF050B17- ACGTCGTTTCAATCGATTAAGAGCTTGGTTGTCCAGTGCTTTCCTTGATGATGTCTTCCA
rJMFF028L08- ACGTCGTTTCAATCGATTAAGAGCTTGGTTGTCCAGTGCTTTCCTTGATGATGTCTTCCA
rJMSF046D04- ACGTCGTTTCAATCGATTAAGAGCTTGGTTGTCCAGTGCTTTCCTTGATGATGTCTTCCA
                      ____________________________________________________________
consensus ACGTCGTTTCAATCGATTAAGAGCTTGGTTGTCCAGTGCTTTCCTTGATGATGTCTTCCA
 
. : . : . : . : . : . :
rJMFF050B17- GTTCCTCAATAATTGCATCGTAGCAGAAAAGATATTGTTCCAATGTTTGAACCATCCCAA
rJMFF028L08- GTTCCTCAATAATTGCATCGTAGCAGAAAAGATATTGTTCCAATGTTTGAACCATCCCAA
rJMSF046D04- GTTCCTCAATAATTGCATCGTAGCAGAAAAGATATTGTTCCAATGTTTGAACCATCCCAA
                      ____________________________________________________________
consensus GTTCCTCAATAATTGCATCGTAGCAGAAAAGATATTGTTCCAATGTTTGAACCATCCCAA
 
. : . : . : . : . : . :
rJMFF050B17- TTCGCTGTGACCTAAATATGGTGATGGTGTTAACAAGATCTAAAGCGGACATATCTCCAA
rJMFF028L08- TTCGCTGTGACCTAAATATGGTGATGGTGTTAACAAGATCTAAAGCGGACATATCTCCAA
rJMSF046D04- TTCGCTGTGACCTAAATATGGTGATGGTGTTAACAAGATCTAAAGCGGACATATCTCCAA
                      ____________________________________________________________
consensus TTCGCTGTGACCTAAATATGGTGATGGTGTTAACAAGATCTAAAGCGGACATATCTCCAA
 
. : . : . : . : . : . :
rJMFF050B17- GTAGGATCCTTTGGATGGTGTTGTGAATTGCGCAATAGGTTCCAGT
rJMFF028L08- GTAGGATCCTTTGGATGGTGTTGTGAATTGCGCAATAGGTTCCAGTTCTACCAATACCCG
rJMSF046D04- GTAGGATCCTTTGGATGGTGTTGTGAATTGCGCAATAGGTTCCAGTTCTACCAATACCCG
                      ____________________________________________________________
consensus GTAGGATCCTTTGGATGGTGTTGTGAATTGCGCAATAGGTTCCAGTTCTACCAATACCCG
 
. : . : . : . : . : . :
rJMFF028L08- CACTGCAGTGCACCACAATTGGCCCAAGACTAGGTGGCAGGGTATGTAAGCGCTTCACAA
rJMSF046D04- CACTGCAGTGCACCACAATTGGCCCAAGACTAGGTGGCAGGGTATGTAAGCGCTTCACAA
                      ____________________________________________________________
consensus CACTGCAGTGCACCACAATTGGCCCAAGACTAGGTGGCAGGGTATGTAAGCGCTTCACAA
 
. : . : . : . : . : . :
rJMFF028L08- TTTCACGAGTAGCAAGAGTGTCCTTCGGAACTCCATGATCAGGCCATTCAGCATATTGAA
rJMSF046D04- TTTCACGAGTAGCAAGAGTGTCCTTCGGAACTCCATGATCAGGCCATTCAGCATATTGAA
                      ____________________________________________________________
consensus TTTCACGAGTAGCAAGAGTGTCCTTCGGAACTCCATGATCAGGCCATTCAGCATATTGAA
 
. : . : . : . : . : . :
rJMFF028L08- AGTGTAA
rJMSF046D04- AGTGTAAGACAGACAAAGGTGGTTCTTCGGACTCTTTGTAGCTAACCTCCAAGCAACGCA
JMSF046D04+ CAAGCAACGCA
                      ____________________________________________________________
consensus AGTGTAAGACAGACAAAGGTGGTTCTTCGGACTCTTTGTAGCTAACCTCCAAGCAACGCA
 
. : . : . : . : . : . :
rJMSF046D04- ATATTAAGGAAGTATCTGTTGTTTTTATCCATTTGGTGGTGATGCATATATTCCC
JMSF046D04+ ATATTAAGGAAGTATCTGTTGTTTTTATCCATTTTGTGGTGATGCATATATTCCCAAATT
                      ____________________________________________________________
consensus ATATTAAGGAAGTATCTGTTGTTTTTATCCATTTTGTGGTGATGCATATATTCCCAAATT
 
. : . : . : . : . : . :
JMSF046D04+ CTCTAACGCCATCCTCCGCCTGAAAATAGTCTCCACACTTCACCGTCTTGTAATTGTCAA
                      ____________________________________________________________
consensus CTCTAACGCCATCCTCCGCCTGAAAATAGTCTCCACACTTCACCGTCTTGTAATTGTCAA
 
. : . : . : . : . : . :
JMFF028L08+ CCCAGAAGT
JMSF046D04+ CCAGTCGTGTAAGCATTACAATTGCAGGACAACGATTCTGGATTACCATTTCCCAGAAGT
JMFF050B17+ AATTGCAGGACAACGATTCTGGATTACCATTCCCCAGAAGT
                      ____________________________________________________________
consensus CCAGTCGTGTAAGCATTACAATTGCAGGACAACGATTCTGGATTACCATTTCCCAGAAGT
 
. : . : . : . : . : . :
JMFF028L08+ CCTCGAAGGTGTTTGGCAGCGGACCTTGTGTCGCAATAAAGCGAGATACATGTTCAGAAA
JMSF046D04+ CCTCGAAGGTGTTTGGCAGCGGACCTTGTGTCGCAATAAAGCGAGATACATGTTCAGAAA
JMFF050B17+ CCTCGAAGGTGTTGNGCAGCGGACCTTGTGTCGCAATAAAGCGAGATACATGTTCAGAAA
                      ____________________________________________________________
consensus CCTCGAAGGTGTTTGGCAGCGGACCTTGTGTCGCAATAAAGCGAGATACATGTTCAGAAA
 
. : . : . : . : . : . :
JMFF028L08+ CTGTGATCAAGCCTGCGTTGATATATCCCCTAGCTGATTGTCTGTAGTCTTTACATGGGT
JMSF046D04+ CTGTGATCAAGCTTGCGTTGATATATCCCCTAGCTGATTGTCTGTAGTCTTTACATGGGT
JMFF050B17+ CTGTGATCAAGCTTGCGTTGATATATCCCCTAGCTGATTGTCTGTAGTCTTTACATGGGT
                      ____________________________________________________________
consensus CTGTGATCAAGCTTGCGTTGATATATCCCCTAGCTGATTGTCTGTAGTCTTTACATGGGT
 
. : . : . : . : . : . :
JMFF028L08+ TCAAAACAACCCTGTTACTGTCAAATGGCAATACATCAGTATAACGGTTTTTGCTGATGT
JMSF046D04+ TCAAAACAACCCTGTTACTGTCAAATGGCAATACATCAGTATAACGGTTTTTGCTGATGT
JMFF050B17+ TCAAAACAACCCTGTTACTGTCAAATGGCAATACATCAGTATAACGGTTTTTGCTGATGT
                      ____________________________________________________________
consensus TCAAAACAACCCTGTTACTGTCAAATGGCAATACATCAGTATAACGGTTTTTGCTGATGT
 
. : . : . : . : . : . :
JMFF028L08+ TTATGCTATCCAGAGCTACTAAGCATCTACTCCTCATATCTGAAGCCCTCATCCTATTTG
JMSF046D04+ TTATGCTATCCAGAGCTACTAAGCATCTACTCCTCATATCTGAAGCCCTCATCCTATTTG
JMFF050B17+ TTATGCTATCCAGAGCTACTAAGCATCTACTCCTCATATCTGAAGCCCTCATCCTATTTG
                      ____________________________________________________________
consensus TTATGCTATCCAGAGCTACTAAGCATCTACTCCTCATATCTGAAGCCCTCATCCTATTTG
 
. : . : . : . : . : . :
JMFF028L08+ CCTGTAAGGTACCGAACTCCTGGCGGATTTTTTCGGGAGCTTGAAACCTCTTCTCTTTGA
JMSF046D04+ CCTGTAAGGTACCGAACTCCTGGCGGATTTTTTCGGGAGCTTGAAACCTCTTCTCTTTGA
JMFF050B17+ CCTGTAAGGTACCGAACTCCTGGCGGATTTTTTCGGGAGCTTGAAACCTCTTCTCTTTGA
                      ____________________________________________________________
consensus CCTGTAAGGTACCGAACTCCTGGCGGATTTTTTCGGGAGCTTGAAACCTCTTCTCTTTGA
 
. : . : . : . : . : . :
JMFF028L08+ GTACCTTGAGTGCTTCGGAGCAGTACCGAAGCTGATCGGACGACAGAACGAGCCTCGGCG
JMSF046D04+ GTACCTTGAGTGCTTCGGAGCAGTACCGAAGCTGATCGGACGACAGAACGAGCCTCGGCG
JMFF050B17+ GTACCTTGAGTGCTTCGGAGCAGTACCGAAGCTGATCGGACGACAGAACGAGCCTCGGCG
                      ____________________________________________________________
consensus GTACCTTGAGTGCTTCGGAGCAGTACCGAAGCTGATCGGACGACAGAACGAGCCTCGGCG
 
. : . : . : . : . : . :
JMFF028L08+ GCTGCGAATCATAAGAGAAATCGAAAGGCTGGGCAGCCTCAGCGGACGACGCAGCGGTTC
JMSF046D04+ GCTGCGAATCATAAGAGAAATCGAAAGGCTGGGCAGCCTCAGCGGACGACGCAGCGGTTC
JMFF050B17+ GCTGCGAATCATAAGAGAAATCGAAAGGCTGGGCAGCCTCAGCGGACGACGCAGCGGTTC
                      ____________________________________________________________
consensus GCTGCGAATCATAAGAGAAATCGAAAGGCTGGGCAGCCTCAGCGGACGACGCAGCGGTTC
 
. : . : . : . : . : . :
JMFF028L08+ CGGTGACGGAGGAGGAAAGAGACTTTCCGGCCGCGGCCATCGCCGATCTCCGGCTGCGAG
JMSF046D04+ CGGTGACGGAGGAGGAAAGAGACTTTCCGGCCGCGGCCATCGCCGATCTCCGGCTGCGAG
JMFF050B17+ CGGTGACGGAGGAGGAAAGAGACTTTCCGGCCGCGGCCATCGCCGATCTCCGGCTGCGAG
                      ____________________________________________________________
consensus CGGTGACGGAGGAGGAAAGAGACTTTCCGGCCGCGGCCATCGCCGATCTCCGGCTGCGAG
 
. : . : . : . : . : . :
JMFF028L08+ TCCGAGTTGAAATGGCGCTACCCGTGTTGTTGGGTGTGGAAGTGGAAGAGTAGTTGGTGC
JMSF046D04+ TCCGAGTTGAAATGGCGCTACCCGTGTTGTTGGGTGTGGAAGTGGAAGAGTAGTTGGTGC
JMFF050B17+ TCCGAGTTGAAATGGCGCTACCCGTGTTGTTGGGTGTGGAAGTGGAAGAGTAGTTGGTGC
                      ____________________________________________________________
consensus TCCGAGTTGAAATGGCGCTACCCGTGTTGTTGGGTGTGGAAGTGGAAGAGTAGTTGGTGC
 
. : . : . : . : . : . :
JMFF028L08+ GCCGTTGAGTTTACGCTCAGTCCAAAAGTGAAGTCTCC
JMSF046D04+ GCCGTTGAGTTTACGCTCAGTCCAAAAGTGAAGTCTCC
JMFF050B17+ GCCGTTGAGTTTACGCTCAGTCCAAAAGTGAAGTCTCCAACCAAAATTATTAATTTCCGG
                      ____________________________________________________________
consensus GCCGTTGAGTTTACGCTCAGTCCAAAAGTGAAGTCTCCAACCAAAATTATTAATTTCCGG