Contig 003290:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C03Sequence466003290 (2)ref|XP_011092390.1|1e-09PREDICTED: G-box-binding factor 4-like [Sesamum indicum]749002720 (4)ref|XP_009615514.1|1e-60PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana tomentosiformi
JMFF049A09Sequence441003290 (2)gb|EYU18526.1|2e-07hypothetical protein MIMGU_mgv1a013542mg [Erythranthe guttata]425002720 (4)ref|XP_011087814.1|5e-10PREDICTED: G-box-binding factor 4-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF012C03+                                                                 ACCGCC
                      ____________________________________________________________
consensus                                                                   ACCGCC
 
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JMFF012C03+           CCAGCCTTCGTCAAAAAATCCTCCAACGTCATTTCCGGGTCCNTACTCCCCCCCTCCTGC
                      ____________________________________________________________
consensus             CCAGCCTTCGTCAAAAAATCCTCCAACGTCATTTCCGGGTCCNTACTCCCCCCCTCCTGC
 
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JMFF012C03+           CCCTCCTCCTCCTCCGCCTCCACTGACAATCTCCCTCCAGACCTCATCCACCGTCTTGTT
JMFF049A09+                                                 AGACCTCATCCACCGTCTTGTT
                      ____________________________________________________________
consensus             CCCTCCTCCTCCTCCGCCTCCACTGACAATCTCCCTCCAGACCTCATCCACCGTCTTGTT
 
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JMFF012C03+           CCCCCCTCCGCCGGCGCCGCCGGATGAGGAGCAGCTGTCGGCGGCGGCGGCCAGGGTAAT
JMFF049A09+           CCCCCCTCCGCCGGCGCCGCCGGATGAGGAGCAGCTGTCGGCGGCGGCGGCCAGGGT-AT
                      ____________________________________________________________
consensus             CCCCCCTCCGCCGGCGCCGCCGGATGAGGAGCAGCTGTCGGCGGCGGCGGCCAGGGTAAT
 
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JMFF012C03+           TGGTATCAGCATAAATACTCTTGATTATATCATCCATGTTCATCGACCCGTAGCCTCGAG
JMFF049A09+           TGGTATCAGCATAAATACTCTTGATTATATCATCCATGTTCATCGACCCGTAGCCTCGAG
                      ____________________________________________________________
consensus             TGGTATCAGCATAAATACTCTTGATTATATCATCCATGTTCATCGACCCGTAGCCTCGAG
 
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JMFF012C03+           TGTGATCGGAGTGAAGCTGATCAGCAAAGGCATGTATAGACGGAGAAGATGGCTGGTGCG
JMFF049A09+           TGTGATCGGAGTGAAGCTGATCAGCAAAGGCATGTATAGACGGAGAAGATGGCTGGTGCG
                      ____________________________________________________________
consensus             TGTGATCGGAGTGAAGCTGATCAGCAAAGGCATGTATAGACGGAGAAGATGGCTGGTGCG
 
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JMFF012C03+           GGCGATCCGGATTGGCCGGCGCAGCTGACGTGGACGCCATAACCGCCGGTTTTCTCGGGC
JMFF049A09+           GGCGATCCGGATTGGCCGGCGCAGCTGACGTGGACGCCATAACCGCCGGTTTTCTCGGGC
                      ____________________________________________________________
consensus             GGCGATCCGGATTGGCCGGCGCAGCTGACGTGGACGCCATAACCGCCGGTTTTCTCGGGC
 
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JMFF012C03+           GGATTTTCCCCTACAAAATTTCCTATCCGATTTCTCAGAGCTCTTCCGTTTGAAGCTTCT
JMFF049A09+           GGATTTTCCCCTACAAAATTTCCTATCCGATTTCTCAGAGCTCTTCCGTTTGAAGCTTCT
                      ____________________________________________________________
consensus             GGATTTTCCCCTACAAAATTTCCTATCCGATTTCTCAGAGCTCTTCCGTTTGAAGCTTCT
 
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JMFF012C03+           TCGCTCCTAGATAATTTTCTGTGACAGATATTTTTACA                      
JMFF049A09+           TCGCTCCTAGATAATTTTCTGTGACAGATATTTTTACACTGGTGAAGAACGGGATCGATA
                      ____________________________________________________________
consensus             TCGCTCCTAGATAATTTTCTGTGACAGATATTTTTACACTGGTGAAGAACGGGATCGATA
 
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JMFF049A09+           CATACACTATAAATACACAGTTAGAAAGAGAAAGAAAAGTAGAGAGAGAAAGAAAATGAT
                      ____________________________________________________________
consensus             CATACACTATAAATACACAGTTAGAAAGAGAAAGAAAAGTAGAGAGAGAAAGAAAATGAT