| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008P24 | Sequence | 605 | 003285 (5) | ref|XP_006365945.1| | 2e-16 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Solan | 773 | 001224 (6) | ref|XP_004251999.1| | 6e-68 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial [Solanum lycopersicum] |
| JMFF048A10 | Sequence | 463 | 003285 (5) | 406 | 001224 (6) | ||||||
| JMSF007B05 | Sequence | 282 | 003285 (5) | 826 | 001224 (6) | ref|XP_011085044.1| | 4e-93 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X1 [Sesam | |||
| JMSF037E19 | Sequence | 705 | 003285 (5) | ref|XP_004251999.1| | 2e-27 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial [Solanum lycopersicum] | 758 | 001224 (6) | ref|XP_011085044.1| | 1e-79 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X1 [Sesam |
| JMSF043M10 | Sequence | 750 | 003285 (5) | ref|XP_006365945.1| | 5e-38 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Solan | 751 | 001224 (6) | ref|XP_011085045.1| | 6e-80 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like isoform X2 [Sesam |
This contig is upended
. : . : . : . : . : . :
JMSF043M10+ ATCTTCCCATCCTCATCATATTCCAGGGGTTTCTATACTGTTCTC
____________________________________________________________
consensus ATCTTCCCATCCTCATCATATTCCAGGGGTTTCTATACTGTTCTC
. : . : . : . : . : . :
JMSF043M10+ TCAGAGCATAATCAGTGGAGAATTTGTAGAATACACTGCTCCTGCTCATTCCAGGAGTCT
JMSF037E19+ TCAGAGCATAATCAGTGGAGAATTTGTAGAATACACTGCTCCTGCTCATTCCAGGAGTCT
____________________________________________________________
consensus TCAGAGCATAATCAGTGGAGAATTTGTAGAATACACTGCTCCTGCTCATTCCAGGAGTCT
. : . : . : . : . : . :
JMSF043M10+ TTGTCATCAGTTCACTCTGGGGAGGGGCATCAATGGTGGTGGCATTAGAAAGCGTCTCAA
JMFF008P24+ GTGGCATTAGAAAGCGTCTCAA
JMSF037E19+ TTGTCATCAGTTCACTCTGGGGAGGGGCATCAATGGTGGTGGCATTAGAAAGCGTCTCAA
____________________________________________________________
consensus TTGTCATCAGTTCACTCTGGGGAGGGGCATCAATGGTGGTGGCATTAGAAAGCGTCTCAA
. : . : . : . : . : . :
JMSF043M10+ AAATGCTCGATCTTGCTTCCCACAAGGCATTTGTCACTGGGGAATAATACATTCCAGGCC
JMFF008P24+ AAATGCTCGATCTTGCTTCCCACAAGGCATTTGTCACTGGGGAATAATACATTCCAGGCC
JMSF037E19+ AAATGCTCGATCTTGCTTCCCACAAGGCATTTGTCACTGGGGAATAATACATTCCAGGCC
____________________________________________________________
consensus AAATGCTCGATCTTGCTTCCCACAAGGCATTTGTCACTGGGGAATAATACATTCCAGGCC
. : . : . : . : . : . :
JMSF043M10+ ACAAGTTGGTCGGCTTTCGAATTGAAGAACCTGCGTCAATGGGAGTGCTAGAGTTGTCTA
JMFF008P24+ ACAAGTTGGTCGGCTTTCGAATTGAAGAACCTGCGTCAATGGGAGTGCTAGAGTTGTCTA
JMSF037E19+ ACAAGTTGGTCGGCTTTCGAATTGAAGAACCTGCGTCAATGGGAGTGCTAGAGTTGTCTA
____________________________________________________________
consensus ACAAGTTGGTCGGCTTTCGAATTGAAGAACCTGCGTCAATGGGAGTGCTAGAGTTGTCTA
. : . : . : . : . : . :
JMSF043M10+ ATGGCACCGAATCGCCGGATGAAGAAGGTCCCTTCGGAGAGCTTGAAAATCGTCTTAATT
JMFF008P24+ ATGGCACCGAATCGCCGGATGAAGAAGGTCCCTTCGGAGAGCTTGAAAATCGTCTTAATT
JMSF037E19+ ATGGCACCGAATCGCCGGATGAAGAAGGTCCCTTCGGAGAGCTTGAAAATCGTCTTAATT
JMFF048A10+ GGATGAAGAAGGTCCCTTCGGAGAGCTTGAAAATCGTCTTAATT
____________________________________________________________
consensus ATGGCACCGAATCGCCGGATGAAGAAGGTCCCTTCGGAGAGCTTGAAAATCGTCTTAATT
. : . : . : . : . : . :
JMSF043M10+ GCGAAATATGGGAAACAATTTGGCCACAAATAAAAATGGATTCTGCTTTCTTGGACGAAC
JMFF008P24+ GCGAAATATGGGAAACAATTTGGCCACAAATAAAAATGGATTCTGCTTTCTTGGACGAAC
JMSF037E19+ GCGAAATATGGGAAACAATTTGGCCACAAATAAAAATGGATTCTGCTTTCTTGGACGAAC
JMFF048A10+ GCGAAATATGGGAAACAATTTGGCCACAAATAAAAATGGATTCTGCTTTCTTGGACGAAC
____________________________________________________________
consensus GCGAAATATGGGAAACAATTTGGCCACAAATAAAAATGGATTCTGCTTTCTTGGACGAAC
. : . : . : . : . : . :
JMSF043M10+ GGAGGGAGTGGGTTGGAGAAAGTTCATAGCTCTGGGGTTTTGAAGATGAAACAAACCAAT
JMFF008P24+ GGAGGGAGTGGGTTGGAGAAAGTTCATAGCTCTGGGGTTTTGAAGATGAAACAAACCAAT
JMSF037E19+ GGAGGGAGTGGGTTGGAGAAAGTTCATAGCTCTGGGGTTTTGAAGATGAAACAAACCAAT
JMFF048A10+ GGAGGGAGTGGGTTGGAGAAAGTTCATAGCTCTGGGGTTTTGAAGATGAAACAAACCAAT
____________________________________________________________
consensus GGAGGGAGTGGGTTGGAGAAAGTTCATAGCTCTGGGGTTTTGAAGATGAAACAAACCAAT
. : . : . : . : . : . :
JMSF043M10+ TGAAGTTTCTTGAAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAATATGGGCAT
JMFF008P24+ TGAAGTTTCTTGAAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAATATGGGCAT
JMSF037E19+ TGAAGTTTCTTGAAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAACATGGGCAT
JMSF007B05+ AAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAATATGGGCAT
JMFF048A10+ TGAAGTTTCTTGAAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAATATGGGCAT
____________________________________________________________
consensus TGAAGTTTCTTGAAACTTGATCGCAAGATGAGATTTTTGATGCATTGAAAATATGGGCAT
. : . : . : . : . : . :
JMSF043M10+ TGGTTAATTTGTTTGGGGAGGGAAGAGTTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
JMFF008P24+ TGGTTAATTTGTTTGGGGAGGGAAGAGCTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
JMSF037E19+ TGGTTAATTTGTTTGGGGAGGGAAGAGTTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
JMSF007B05+ TGGTTAATTTGTTTGGGGAGGGAAGAGTTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
JMFF048A10+ TGGTTAATTTGTTTGGGGAGGGAAGAGTTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
____________________________________________________________
consensus TGGTTAATTTGTTTGGGGAGGGAAGAGTTTGGGTTGATTCTCGAATGAGAAAGTGGGAAA
. : . : . : . : . : . :
JMSF043M10+ CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
JMFF008P24+ CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
JMSF037E19+ CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
JMSF007B05+ CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
JMFF048A10+ CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
____________________________________________________________
consensus CAAATGTGTGAAGAGAGGATACCGATTCATTTGTTCTCACCTTTAAATCAATGGAGGATG
. : . : . : . : . : . :
JMSF043M10+ TCGATAGATAATGAGAGANNCGGAGGTGCTCGTGGAGGTTTCATGGAGTCGGAAGGAAAA
JMFF008P24+ TCGATAGATAATGAGAGA-ACGGAGGTGCTCGTGGAGGTTTCATGGAGTCGGAAGGAAAA
JMSF037E19+ TCGATAGATAATGAGAGA-ACGGAGGTGCTCGTGGAGGTTTCATGGAGTCGGAAGGAAAA
JMSF007B05+ TCGATAGATAATGAGAGA-ACGGAGGTGCTCGTGGAGGTTTCATGGAGTCGGAAGGAAAA
JMFF048A10+ TCGATAGATAATGAGAGA-ACGGAGGTGCTCGTGGAGGTTTCGTGGAGTCGGAAGGAAAA
____________________________________________________________
consensus TCGATAGATAATGAGAGA-ACGGAGGTGCTCGTGGAGGTTTCATGGAGTCGGAAGGAAAA
. : . : . : . : . : . :
JMSF043M10+ TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCAC
JMFF008P24+ TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCAC
JMSF037E19+ TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCAC
JMSF007B05+ TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCACTCCCAATCAT
JMFF048A10+ TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCACTCCCAATCATAGTCCC
____________________________________________________________
consensus TGCACCTAATTGGCGACTAAGTGTTTTTCTGTGAAATATGCCACTCCCAATCATAGTCCC