Contig 003277:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046A01Sequence645003277 (2)dbj|BAE94400.1|5e-99Caffeic acid 3-O-methyltransferase [Ipomoea nil] dbj|BAE94406.1| Caffeic acid 3-526023400dbj|BAE94403.1|2e-115Caffeic acid 3-O-methyltransferase [Ipomoea nil]
JMFN014K18Sequence616003277 (2)dbj|BAE94400.1|1e-122Caffeic acid 3-O-methyltransferase [Ipomoea nil] dbj|BAE94406.1| Caffeic acid 3-

Alignment

This contig is upended


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JMFN014K18+                                            GGTTGAAAACCTTGTTGAATCTTGGAT
                      ____________________________________________________________
consensus                                              GGTTGAAAACCTTGTTGAATCTTGGAT
 
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JMFN014K18+           CTGTTCCGTGGTACTCAAATGCAGTCATTCCATATGCCTTGTTGAATGGAATTCCACCCT
JMFF046A01+                                                             ATTCCACCCT
                      ____________________________________________________________
consensus             CTGTTCCGTGGTACTCAAATGCAGTCATTCCATATGCCTTGTTGAATGGAATTCCACCCT
 
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JMFN014K18+           CAAGCACGGCATCTTTTAAGTGGTACCAGCTTTCCATGAGGACTTTATCTTGATTCATGA
JMFF046A01+           CAAGCACGGCATCTNTTAAGTGGTACCAGCTTTCCATGAGGACTTTATCTTGATTCATGA
                      ____________________________________________________________
consensus             CAAGCACGGCATCTTTTAAGTGGTACCAGCTTTCCATGAGGACTTTATCTTGATTCATGA
 
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JMFN014K18+           GGAGGAGGGGCGCCATGGAAACGCCGTCGCCGTTCTTTGTCAAATACTTACAAACCGGGG
JMFF046A01+           GGAGGAGGGGCGCCATGGAAACGCCGTCGCCGTTCTTTGTCAAATACTTACAAACCGGGG
                      ____________________________________________________________
consensus             GGAGGAGGGGCGCCATGGAAACGCCGTCGCCGTTCTTTGTCAAATACTTACAAACCGGGG
 
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JMFN014K18+           CCAAGCTGTAGAGCCGCTCGACCCGGCCGTCGGGGAGGGTCCGGAGAGAGCAGTTGAGGA
JMFF046A01+           CCAAGCTGTAGAGCCGCTCGACCCGGCCGTCGGGGAGGGTCCGGAGAGAGCAGTTGAGGA
                      ____________________________________________________________
consensus             CCAAGCTGTAGAGCCGCTCGACCCGGCCGTCGGGGAGGGTCCGGAGAGAGCAGTTGAGGA
 
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JMFN014K18+           CGGAGTAGGTGCAGAGGAGGCGGAGGATCCGGTCCAGCATGACGGCGGCGTCCGGGTTAG
JMFF046A01+           CGGAGTAGGTGCAGAGGAGGCGGAGGATCCGGTCCAGCATGACGGCGGCGTCCGGGTTAG
                      ____________________________________________________________
consensus             CGGAGTAGGTGCAGAGGAGGCGGAGGATCCGGTCCAGCATGACGGCGGCGTCCGGGTTAG
 
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JMFN014K18+           TGGTGGGGAGCTGCGCCGCGAGTTCCGATGGGGAGACGGCGGCTCCCGGCCCGGCTTTGG
JMFF046A01+           TGGTGGGGAGCTGCGCCGCGAGTTCCGATGGGGAGACGGCGGCTCCCGGCCCGGCTTTGG
                      ____________________________________________________________
consensus             TGGTGGGGAGCTGCGCCGCGAGTTCCGATGGGGAGACGGCGGCTCCCGGCCCGGCTTTGG
 
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JMFN014K18+           CTATGAGCTCCAGAAGGTCGAGTTCTATGGCGGATTTGAGGACCATGGGGAGAACGGAAG
JMFF046A01+           CTATGAGCTCCAGAAGGTCGAGTTCTATGGCGGATTTGAGGACCATGGGGAGAACGGAAG
                      ____________________________________________________________
consensus             CTATGAGCTCCAGAAGGTCGAGTTCTATGGCGGATTTGAGGACCATGGGGAGAACGGAAG
 
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JMFN014K18+           CGCTGGCGAGCTGCATAGCGAATAGGCTGGCTTCTTCGTCGGAGTCGACCCGGTTTGTCA
JMFF046A01+           CGATGGCGAGCTGCATAGCGAATAGGCTGGCTTCTTCGTCGGAGTCGACCCGGTTTGTCA
                      ____________________________________________________________
consensus             CGCTGGCGAGCTGCATAGCGAATAGGCTGGCTTCTTCGTCGGAGTCGACCCGGTTTGTCA
 
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JMFN014K18+           TCGGGCTGTCGTTTCCGGTCGACCCCATTTCAGCTTAATGCGATTGCAGAGTGTAGTGTG
JMFF046A01+           TCGGGCTGTCGTTTCCGGTCGACCCCATTTCAGCTTAATGCGATTGCAGAGTGTAGTGTG
                      ____________________________________________________________
consensus             TCGGGCTGTCGTTTCCGGTCGACCCCATTTCAGCTTAATGCGATTGCAGAGTGTAGTGTG
 
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JMFN014K18+           AAAGAAAGAAAGAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA           
JMFF046A01+           AAAGAAAGAAAGAATGGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAGAGAACG
                      ____________________________________________________________
consensus             AAAGAAAGAAAGAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAACG
 
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JMFF046A01+           GTTTGAGTATGAGAGCGATGAGCATCGCTGCTTATATGGTTGAACTTGGTTCACCAACCC
                      ____________________________________________________________
consensus             GTTTGAGTATGAGAGCGATGAGCATCGCTGCTTATATGGTTGAACTTGGTTCACCAACCC