Contig 003273:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042P17Sequence635003273 (4)ref|XP_009598672.1|6e-46PREDICTED: transcription factor GTE7-like [Nicotiana tomentosiformis]
JMFF045L14Sequence626003273 (4)ref|XP_009598672.1|2e-45PREDICTED: transcription factor GTE7-like [Nicotiana tomentosiformis]598005623 (2)
JMFS021G08Sequence608003273 (4)ref|XP_009598672.1|2e-48PREDICTED: transcription factor GTE7-like [Nicotiana tomentosiformis]
JMFS069F12Sequence618003273 (4)ref|XP_009598672.1|2e-46PREDICTED: transcription factor GTE7-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+             TAGACTTCCCGTAGGGTCTTGGATTAGTAGTGCTGGTGCTGAAATGACCCGACTCAAT
JMFS069F12+                                 GGATTAGTAGTGCTGGTGCTGAAATGACCCGACTCAAT
JMFF042P17+                                 GGATTAGTAGTGCTGGTGCTGAAATGACCCGACTCAAT
JMFF045L14+                                             CTGGTGCTGAAATGACCCGACTCAAT
                      ____________________________________________________________
consensus               TAGACTTCCCGTAGGGTCTTGGATTAGTAGTGCTGGTGCTGAAATGACCCGACTCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           TCGATCTCTGAGGTTCCGAATCTGTTCGAGCTCCGCGCCAAGCCGCTTCCGAAGCTCGCT
JMFS069F12+           TCGATCTCTGAGGTTCCGAATCTGTTCGAGCTCCGCGCCAAGCCGCTTCCGAAGCTCGCT
JMFF042P17+           TCGATCTCTGAGGTTCCGAATCTGTTCGAGCTCCGCGCCAAGCCGCTTCCGAAGCTCGCT
JMFF045L14+           TCGATCTCTGAGGTTCCGAATCTGTTCGAGCTCCGCGCCAAGCCGCTTCCGAAGCTCGCT
                      ____________________________________________________________
consensus             TCGATCTCTGAGGTTCCGAATCTGTTCGAGCTCCGCGCCAAGCCGCTTCCGAAGCTCGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           GAGCTCTGCTTTCGAGTACGACGTGACGTTGTAGGTTAAATAGCTCCCAAAATTGAGGCC
JMFS069F12+           GAGCTCTGCTTTCGAGTACGACGTGACGTTGTAGGTTAAATAGCTCCCAAAATTGAGGCC
JMFF042P17+           GAGCTCTGCTTTCGAGTACGACGTGACGTTGTAGGTTAAATAGCTCCCAAAATTGAGGCC
JMFF045L14+           GAGCTCTGCTTTCGAGTACGACGTGACGTTGTAGGTTAAATAGCTCCCAAAATTGAGGCC
                      ____________________________________________________________
consensus             GAGCTCTGCTTTCGAGTACGACGTGACGTTGTAGGTTAAATAGCTCCCAAAATTGAGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           ATTTGCTTCCTTAGGCGGCTGATTGAACGAATACGCATCGTCCGGAGCCGTTTGCTTAAC
JMFS069F12+           ATTTGCTTCCTTAGGCGGCTGATTGAACGAATACGCATCGTCCGGAGCCGTTTGCTTAAC
JMFF042P17+           ATTTGCTTCCTTAGGCGGCTGATTGAACGAATACGCATCGTCCGGAGCCGTTTGCTTAAC
JMFF045L14+           ATTTGCTTCCTTAGGCGGCTGATTGAACGAATACGCATCGTCCGGAGCCGTTTGCTTAAC
                      ____________________________________________________________
consensus             ATTTGCTTCCTTAGGCGGCTGATTGAACGAATACGCATCGTCCGGAGCCGTTTGCTTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           AGCAGGCAAATCATCGTTCTGACGGCCGTTAACTCCGTGATGCAAATATTTCTGTTTCTT
JMFS069F12+           AGCAGGCAAATCATCGTTCTGACGGCCGTTAACTCCGTGATGCAAATATTTCTGTTTCTT
JMFF042P17+           AGCAGGCAAATCATCGTTCTGACGGCCGTTAACTCCGTGATGCAAATATTTCTGTTTCTT
JMFF045L14+           AGCAGGCAAATCATCGTTCTGACGGCCGTTAACTCCGTGATGCAAATATTTCTGTTTCTT
                      ____________________________________________________________
consensus             AGCAGGCAAATCATCGTTCTGACGGCCGTTAACTCCGTGATGCAAATATTTCTGTTTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           CTTCGGGTTAGAATTAGCGCTAGGTTTCAAATGAGGACGAGAGTTAGGGGTTTTCCCCAT
JMFS069F12+           CTTCGGGTTAGAATTAGCGCTAGGTTTCAAATGAGGACGAGAGTTAGGGGTTTTCCCCAT
JMFF042P17+           CTTCGGGTTAGAATTAGCGCTAGGTTTCAAATGAGGACGAGAGTTAGGGGTTTTCCCCAT
JMFF045L14+           CTTCGGGTTAGAATTAGCGCTAGGTTTCAAATGAGGACGAGAGTTAGGGGTTTTCCCCAT
                      ____________________________________________________________
consensus             CTTCGGGTTAGAATTAGCGCTAGGTTTCAAATGAGGACGAGAGTTAGGGGTTTTCCCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           GAATCCACCACCAGCAGCACAGGATTGAGCCCAACTTAGTTCATTACGACAAGCTAATGC
JMFS069F12+           GAATCCACCACCAGCAGCACAGGATTGAGCCCAACTTAGTTCATTACGACAAGCTAATGC
JMFF042P17+           GAATCCACCACCAGCAGCACAGGATTGAGCCCAACTTAGTTCATTACGACAAGCTAATGC
JMFF045L14+           GAATCCACCACCAGCAGCACAGGATTGAGCCCAACTTAGTTCATTACGACAAGCTAATGC
                      ____________________________________________________________
consensus             GAATCCACCACCAGCAGCACAGGATTGAGCCCAACTTAGTTCATTACGACAAGCTAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           TGCTGACGCCATGAATTGCAGCAGAAGCGCTGAATTCCGGCGAATTCGAGGCCGAGCCGA
JMFS069F12+           TGCTGACGCCATGAATTGCAGCAGAAGCGCTGAATTCCGGCGAATTCGAGGCCGAGCCGA
JMFF042P17+           TGCTGACGCCATGAATTGCAGCAGAAGCGCTGAATTCCGGCGAATTCGAGGCCGAGCCGA
JMFF045L14+           TGCTGACGCCATGAATTGCAGCAGAAGCGCTGAATTCCGGCGAATTCGAGGCCGAGCCGA
                      ____________________________________________________________
consensus             TGCTGACGCCATGAATTGCAGCAGAAGCGCTGAATTCCGGCGAATTCGAGGCCGAGCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           TAGGTTTCAGGTTGTGTAGAAAACATGAATTAAATATAACGGAAATGTCACGCGCTCGCC
JMFS069F12+           TAGGTTTCAGGTTGTGTAGAAAACATGAATTAAATATAACGGAAATGTCACGCGCTCGCC
JMFF042P17+           TAGGTTTCAGGTTGTGTAGAAAACATGAATTAAATATAACGGAAATGTCACGCGCTCGCC
JMFF045L14+           TAGGTTTCAGGTTGTGTAGAAAACATGAATTAAATATAACGGAAATGTCACGCGCTCGCC
                      ____________________________________________________________
consensus             TAGGTTTCAGGTTGTGTAGAAAACATGAATTAAATATAACGGAAATGTCACGCGCTCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           GGAATAAGACAAAACCTCCGTCCGCCAGCCGGCAATGGATATATATACGTATAAGTGAAA
JMFS069F12+           GGAATAAGACAAAACCTCCGTCCGCCAGCCGGCAATGGATATATATACGTATAAGTGAAA
JMFF042P17+           GGAATAAGACAAAACCTCCGTCCGCCAGCCGGCAATGGATATATATACGTATAAGTGAAA
JMFF045L14+           GGAATAAGACAAAACCTCCGTCCGCCAGCCGGCAATGGATATATATACGTATAAGTGAAA
                      ____________________________________________________________
consensus             GGAATAAGACAAAACCTCCGTCCGCCAGCCGGCAATGGATATATATACGTATAAGTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS021G08+           CAACGAAGGA                                                  
JMFS069F12+           CAACGAAGGAGGCTGTGGGGGCAGGAGGTTAGGGTT                        
JMFF042P17+           CAACGAAGGAGGCTGTGGGGGCAGGAGGTTAGGGTTTCAACTCTGAAGGGATTGAGC   
JMFF045L14+           CAACGAAGGAGGCTGTGGGGGCAGGAGGTTAGGGTTTCAACTCTGAAGGGATTGAGCCGG
                      ____________________________________________________________
consensus             CAACGAAGGAGGCTGTGGGGGCAGGAGGTTAGGGTTTCAACTCTGAAGGGATTGAGCCGG