| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003D12 | Sequence | 505 | 003271 (18) | ref|XP_009602435.1| | 4e-33 | PREDICTED: protein vip1-like isoform X1 [Nicotiana tomentosiformis] ref|XP_00960 | 717 | 003271 (18) | ref|XP_009602438.1| | 1e-71 | PREDICTED: uncharacterized protein LOC104097559 isoform X3 [Nicotiana tomentosi |
| JMFF020M12 | Sequence | 605 | 003271 (18) | ref|XP_009602437.1| | 4e-66 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 688 | 003271 (18) | ref|XP_009602438.1| | 9e-72 | PREDICTED: uncharacterized protein LOC104097559 isoform X3 [Nicotiana tomentosi |
| JMFF044M07 | Sequence | 643 | 003271 (18) | ref|XP_009602437.1| | 9e-54 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 615 | 003271 (18) | ref|XP_011098604.1| | 181 | PREDICTED: uncharacterized protein LOC105177232 [Sesamum indicum] ref|XP_0110986 |
| JMFN029M21 | Sequence | 574 | 003271 (18) | ref|XP_009602437.1| | 1e-74 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | |||||
| JMSF013O10 | Sequence | 326 | 003271 (18) | ref|XP_009602435.1| | 2e-19 | PREDICTED: protein vip1-like isoform X1 [Nicotiana tomentosiformis] ref|XP_00960 | 782 | 003271 (18) | ref|XP_009602438.1| | 7e-72 | PREDICTED: uncharacterized protein LOC104097559 isoform X3 [Nicotiana tomentosi |
| JMSF016B22 | Sequence | 499 | 003271 (18) | ref|XP_009602435.1| | 8e-21 | PREDICTED: protein vip1-like isoform X1 [Nicotiana tomentosiformis] ref|XP_00960 | 702 | 018171 | |||
| JMSF025O07 | Sequence | 602 | 003271 (18) | ref|XP_009602437.1| | 3e-69 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 751 | 003271 (18) | ref|XP_009602437.1| | 3e-72 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] |
| JMSF038G06 | Sequence | 663 | 003271 (18) | ref|XP_009602437.1| | 5e-76 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 852 | 003271 (18) | ref|XP_009602437.1| | 2e-103 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] |
| JMSF042D20 | Sequence | 680 | 003271 (18) | ref|XP_009602437.1| | 5e-68 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 803 | 003271 (18) | ref|XP_009602437.1| | 1e-92 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] |
| JMSF047E15 | Sequence | 707 | 003271 (18) | ref|XP_009602437.1| | 2e-83 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] | 785 | 003271 (18) | ref|XP_009602437.1| | 4e-85 | PREDICTED: protein vip1-like isoform X2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF044M07- GATAATGACAGTTATACAAATATATTCTTGTTTTAAGGAAACAAAGA
rJMFF003D12- TTCTTGTTTTAAGGAAACAAAGA
rJMSF047E15- TTCTTGTTTTAAGGAAACAAAGA
rJMSF042D20- AAGA
rJMSF025O07- AAGA
rJMSF013O10- AGGAAACAAAGA
rJMSF038G06- TTCTTGTTTTAAGGAAACAAAGA
____________________________________________________________
consensus GATAATGACAGTTATACAAATATATTCTTGTTTTAAGGAAACAAAGA
. : . : . : . : . : . :
rJMFF044M07- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMFF003D12- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMSF047E15- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMSF042D20- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMFF020M12- TTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMSF025O07- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMSF013O10- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
rJMSF038G06- CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
____________________________________________________________
consensus CATTATGACCTAAAACAACCACCCTAAAGGCATTTACCTATGACAGAAATGTCATGTATG
. : . : . : . : . : . :
rJMFF044M07- AACCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMFF003D12- AACCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMSF047E15- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMSF042D20- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMFF020M12- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMSF025O07- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMSF013O10- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
rJMSF038G06- AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
____________________________________________________________
consensus AATCTGCTACAATAGACTTCAATGATACTACTACAATGATATGAAGTTACCATTCCTCAA
. : . : . : . : . : . :
rJMFF044M07- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMFF003D12- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMSF047E15- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMSF042D20- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMFF020M12- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMSF025O07- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMSF013O10- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
rJMSF038G06- GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
____________________________________________________________
consensus GGCATCGTATTACCTTTCTTACCCAAATCAGCAGTAGCCTTGGCAGCGCGATCTAAAACG
. : . : . : . : . : . :
rJMFF044M07- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMFF003D12- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMSF047E15- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMSF042D20- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMFF020M12- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMSF025O07- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMSF013O10- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
rJMSF038G06- CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGC---AGCAGCA
____________________________________________________________
consensus CCTGAAACCCAAAGGGCACCCTTTGCAAAGTAACTGCTGTTCACAACTGCAGCAGCAGCA
. : . : . : . : . : . :
rJMFF044M07- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMFF003D12- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMSF047E15- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMSF042D20- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMFF020M12- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMSF025O07- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMSF013O10- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
rJMSF038G06- GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
JMSF047E15+ GGACACGTGGTAC
____________________________________________________________
consensus GCTATAGCGGTTTTCCCTGTATAAGATGCAGCATTCTTGGTAATCTCGGACACGTGGTAC
. : . : . : . : . : . :
rJMFF044M07- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMFF003D12- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMSF047E15- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMSF042D20- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMFF020M12- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMSF025O07- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMSF013O10- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
rJMSF038G06- TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
JMSF038G06+ CGGAATTGATTTTATCAGTGAGCCCGATT
JMFN029M21+ ATCAGTGAGCCCGATT
JMSF047E15+ TTCTCATCGACAGATTTAACAGCNTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
____________________________________________________________
consensus TTCTCATCGACAGATTTAACAGCCTCCACTCCGGAATTGATTTTATCAGTGAGCCCGATT
. : . : . : . : . : . :
rJMFF044M07- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMFF003D12- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMSF047E15- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMSF042D20- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMFF020M12- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMSF025O07- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMSF013O10- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
rJMSF038G06- TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMSF038G06+ TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMFF020M12+ CTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMFN029M21+ TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMSF025O07+ AGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMSF047E15+ TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
JMSF042D20+ TCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
____________________________________________________________
consensus TTCATGCTAAGCTCTGCCACCTTGGCTGCTGCAGTTGACGACACCTGATGCTCCTCGTCA
. : . : . : . : . : . :
rJMFF044M07- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMFF003D12- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMSF047E15- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMSF042D20- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMFF020M12- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMSF025O07- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMSF013O10- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
rJMSF038G06- AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMSF038G06+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMFF020M12+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMFN029M21+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMSF025O07+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMSF047E15+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMSF042D20+ AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
JMFF044M07+ CAACACGTATCCCTTAGCAATCATGGTT
____________________________________________________________
consensus AAGGCTTTGGCTTTCGCTAATGCATCTTTACTCAACACGTATCCCTTAGCAATCATGGTT
. : . : . : . : . : . :
rJMFF044M07- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGTGGGAAACAAATTCATTTGC
rJMFF003D12- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMSF047E15- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMSF042D20- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMFF020M12- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMSF025O07- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMSF013O10- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
rJMSF038G06- GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMSF038G06+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMFF020M12+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMFN029M21+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMSF025O07+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMSF047E15+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMSF042D20+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
JMFF044M07+ GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
____________________________________________________________
consensus GTGACTACTTGTTGAGCAATAGTCACAGCCTCTCCAGGGGT-GGAAACAAATTCATTTGC
. : . : . : . : . : . :
rJMFF044M07- ATGAGTTACCTGTGAACTACTTTGATTG
rJMFF003D12- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMSF047E15- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMSF042D20- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMFF020M12- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMSF025O07- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMSF013O10- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
rJMSF038G06- ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMSF038G06+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMFF020M12+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMFN029M21+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMSF025O07+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMSF047E15+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMSF042D20+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
JMFF003D12+ CTACTAAAGAAAAAAGGATCATGTGC
JMFF044M07+ ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
____________________________________________________________
consensus ATGAGTTACCTGTGAACTACTTTGATTGTCCATTCTACTAAAGAAAAAAGGATCATGTGC
. : . : . : . : . : . :
rJMFF003D12- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
rJMSF047E15- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
rJMSF042D20- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
rJMFF020M12- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
rJMSF025O07- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
rJMSF013O10- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCANCGATAGCAGATCCACT
rJMSF038G06- ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMSF038G06+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMFF020M12+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMFN029M21+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMSF025O07+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMSF047E15+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMSF042D20+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMFF003D12+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
JMSF016B22+ CACT
JMFF044M07+ ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
____________________________________________________________
consensus ATCTAACTTATCTTCCAGGCGAGTGATACGGACACATTGATCAACGATAGCAGATCCACT
. : . : . : . : . : . :
rJMFF003D12- AAGCAAGAGAGCAGTTTCCACTCCGTAAG
rJMSF047E15- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAANC
rJMSF042D20- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
rJMFF020M12- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCC
rJMSF025O07- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTT-AATGTAACGTAGGCTAAAGAAAC
rJMSF013O10- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTT-AATGTANCGTAGGCT-AAGAAAC
rJMSF038G06- AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF038G06+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMFF020M12+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMFN029M21+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF025O07+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF013O10+ AAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF047E15+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF042D20+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMFF003D12+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMSF016B22+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
JMFF044M07+ AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
____________________________________________________________
consensus AAGCAAGAGAGCAGTTTCCACTCCGTAAGCCTCTTTAAATGTAACGTAGGCTAAAGAAAC
. : . : . : . : . : . :
rJMSF047E15- ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCC
rJMSF042D20- ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGACGCCGCAGTAAGAGAAAAACTC
rJMSF025O07- ATAATCGCTCAATCTGATGATCTCTAGGT
rJMSF013O10- ATAATCGCTCAATCTGATGATCTCTAGGTGTNCAATGTCGCC
rJMSF038G06- ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF038G06+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMFF020M12+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMFN029M21+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF025O07+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF013O10+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF047E15+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF042D20+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGACGCCGCAGTAAGAGAAAAACTC
JMFF003D12+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMSF016B22+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
JMFF044M07+ ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
____________________________________________________________
consensus ATAATCGCTCAATCTGATGATCTCTAGGTGTTCAATGTCGCCGCAGTAAGAGAAAAACTC
. : . : . : . : . : . :
rJMSF042D20- ATACACCTCTTTGTCACTGG
rJMSF038G06- ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACNGTAT
JMSF038G06+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMFF020M12+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMFN029M21+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMSF025O07+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMSF013O10+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMSF047E15+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMSF042D20+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMFF003D12+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMSF016B22+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
JMFF044M07+ ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
____________________________________________________________
consensus ATACACCTCTTTGTCACTGGCATTGGGAGAAAGCCCTGTGACTTCCACCGTATAATTTTC
. : . : . : . : . : . :
JMSF038G06+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMFF020M12+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMFN029M21+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTG
JMSF025O07+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTG
JMSF013O10+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMSF047E15+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMSF042D20+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMFF003D12+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMSF016B22+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
JMFF044M07+ CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
____________________________________________________________
consensus CACAATCATGGATTCAGAAATCCGAAAAGCCAATTTTACAGAGATCAAACCTGATCGAAT
. : . : . : . : . : . :
JMSF038G06+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMFF020M12+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMSF013O10+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMSF047E15+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMSF042D20+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMFF003D12+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMSF016B22+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
JMFF044M07+ CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
____________________________________________________________
consensus CAAAATCGAAAGCACAAAATTAATCGAATTAAGAAGCGAAGCGTTAGTAAATTGTAACCT
. : . : . : . : . : . :
JMSF038G06+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGG
JMFF020M12+ ACCTGTTCTGCCTCGTCTATGGCCAAGATC
JMSF013O10+ ACCTGTTCTGCCTCGTCTATGGCCAAGATC
JMSF047E15+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGG
JMSF042D20+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGGTAGATGTCAGTGGAAATTCGGAAGAAA
JMFF003D12+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGGTAGATGTCAGTGGAAATTCGGAAGAAA
JMSF016B22+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGGTAGATGTCAGTGGAAATTCGGAAGAAA
JMFF044M07+ ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGGTAGATGTCAGTGGAAATTCGGAAGAAA
____________________________________________________________
consensus ACCTGTTCTGCCTCGTCTATGGCCAAGATCGGGTAGATGTCAGTGGAAATTCGGAAGAAA
. : . : . : . : . : . :
JMSF042D20+ ATGAGAGAGAGAGAGAGAGCACCGGGTGGAA
JMFF003D12+ ATGAGAGAGAGAGAGAGAGCACCGGGTGGAACGTTAGCCAGCTCATCAAACGAAAGCCT
JMSF016B22+ ATGAGAGAGAGAGAGAGAGC
JMFF044M07+ ATGAGAGAGAGAGAGAGAGCACCGGGTGGAACG-TAGCCAGCTCATCAAACGAAAGCCTC
____________________________________________________________
consensus ATGAGAGAGAGAGAGAGAGCACCGGGTGGAACGTTAGCCAGCTCATCAAACGAAAGCCTC