Contig 003268:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044D23Sequence632003268 (2)ref|XP_009613585.1|186PREDICTED: uncharacterized protein LOC104106690 [Nicotiana tomentosiformis] ref|603006946 (3)ref|XP_010109884.1|5e-12hypothetical protein L484_003815 [Morus notabilis] gb|EXC24837.1| hypothetical p
JMFF050L06Sequence608003268 (2)ref|XP_009613585.1|179PREDICTED: uncharacterized protein LOC104106690 [Nicotiana tomentosiformis] ref|548006946 (3)ref|XP_010109884.1|1e-13hypothetical protein L484_003815 [Morus notabilis] gb|EXC24837.1| hypothetical p

Alignment

This contig is upended


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JMFF050L06+ TTCCCCAT
JMFF044D23+ ATCAGAATACGCCTCGTCCCGGCTTTCCCCAT
                      ____________________________________________________________
consensus ATCAGAATACGCCTCGTCCCGGCTTTCCCCAT
 
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JMFF050L06+ CGGATTCNCCTTTCGTATACATGCTCTCAACCAAGCTATCCAACAAAGCAGCATGATCAT
JMFF044D23+ CGGATTCCCCTNTCGTATACATGCTCTCAACCAAGCTATCCAACAAAGCAGCATGATCAT
                      ____________________________________________________________
consensus CGGATTCCCCTTTCGTATACATGCTCTCAACCAAGCTATCCAACAAAGCAGCATGATCAT
 
. : . : . : . : . : . :
JMFF050L06+ TCCAAGGATGAGCGTTGTAAATATTCTGACTTCGAGGCCTTTCGCCCGAATAGAATCTTA
JMFF044D23+ TCCAAGGATGAGCGTTGTAAATATTCTGACTTCGAGGCCTTTCGCCCGAATAGAATCTTA
                      ____________________________________________________________
consensus TCCAAGGATGAGCGTTGTAAATATTCTGACTTCGAGGCCTTTCGCCCGAATAGAATCTTA
 
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JMFF050L06+ TACTATCCCGCATCCTTCCTGGAGGGAGCTTTGGGGTAGTACTCGAAGGCTCCTCATAGG
JMFF044D23+ TACTATCCCGCATCCTTCCTGGAGGGAGCTTTGGGGTAGTACTCGAAGGCTCCTCATAGG
                      ____________________________________________________________
consensus TACTATCCCGCATCCTTCCTGGAGGGAGCTTTGGGGTAGTACTCGAAGGCTCCTCATAGG
 
. : . : . : . : . : . :
JMFF050L06+ CATAGGCTTTCCTCTCGTTCTCGGGTTTTCGCCTCCCGGGAGTTTGCTCCCACACAAACG
JMFF044D23+ CATAGGCTTTCCTCTCGTTCTCGGGTTTTCGCCTCCCGGGAGTTTGCTCCCACACAAACG
                      ____________________________________________________________
consensus CATAGGCTTTCCTCTCGTTCTCGGGTTTTCGCCTCCCGGGAGTTTGCTCCCACACAAACG
 
. : . : . : . : . : . :
JMFF050L06+ GAACTGCAGCCGGTTTAGTCACCTCGCCCACATCCCGCTTACACTTTAGCACGGGCAGAG
JMFF044D23+ GAACTGCAGCCGGTTTAGTCACCTCGCCCACATCCCGCTTACACTTTAGCACGGGCAGAG
                      ____________________________________________________________
consensus GAACTGCAGCCGGTTTAGTCACCTCGCCCACATCCCGCTTACACTTTAGCACGGGCAGAG
 
. : . : . : . : . : . :
JMFF050L06+ ATTGCTGCCTGTTCGGGGGCGCCTTCCCAATCGTCTTCCTAATCACTTCCTCGGGTTGAG
JMFF044D23+ ATTGCTGCCTGTTCGGGGGCGCCTTCCCAATCGTCTTCCTAATCACTTCCTCGGGTTGAG
                      ____________________________________________________________
consensus ATTGCTGCCTGTTCGGGGGCGCCTTCCCAATCGTCTTCCTAATCACTTCCTCGGGTTGAG
 
. : . : . : . : . : . :
JMFF050L06+ ACACAATCGACGACATTCTCCTCACCGATATAAGCGGGGCATTGAAATTCAGCTGCTTCT
JMFF044D23+ ACACAATCGACGACATTCTCCTCACCGATATAAGCGGGGCATTGAAATTCAGCTGCTTCT
                      ____________________________________________________________
consensus ACACAATCGACGACATTCTCCTCACCGATATAAGCGGGGCATTGAAATTCAGCTGCTTCT
 
. : . : . : . : . : . :
JMFF050L06+ TCTCCATTATCCCTCAAAGATATCACTTTCTCCTACTCGTTTTGCCAATTCAAAATTACA
JMFF044D23+ TCTCCATTATCCCTCAAAGATATCACTTTCTCCTACTCGTTTTGCCAATTCAAAATTACA
                      ____________________________________________________________
consensus TCTCCATTATCCCTCAAAGATATCACTTTCTCCTACTCGTTTTGCCAATTCAAAATTACA
 
. : . : . : . : . : . :
JMFF050L06+ CACAATTTGCCCTATTACCAGTAACTGTGTGAAAGAGAACAGAGAAGGGGGGAGAGACAG
JMFF044D23+ CACAATTTGCCCTATTACCAGTAACTGTGTGAAAGAGAACAGAGAAGGGGGGAGAGACAG
                      ____________________________________________________________
consensus CACAATTTGCCCTATTACCAGTAACTGTGTGAAAGAGAACAGAGAAGGGGGGAGAGACAG
 
. : . : . : . : . : . :
JMFF050L06+ AGAGAGAAAGAGAGAGAGATTGCAGGCTCTTGGTGAATTCTTGCCTTGATCGACGGCACT
JMFF044D23+ AGAGAGAAAGAGAGAGAGATTGCAGGCTCTTGGTGAATTCTTGCCTTGATCGACGGCACT
                      ____________________________________________________________
consensus AGAGAGAAAGAGAGAGAGATTGCAGGCTCTTGGTGAATTCTTGCCTTGATCGACGGCACT