Contig 003267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043O17Sequence642003267 (2)ref|XP_011085845.1|1e-50PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]657011166 (2)ref|XP_009592532.1|3e-69PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF047J15Sequence641003267 (2)ref|XP_011085845.1|1e-50PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]534011166 (2)ref|XP_009592532.1|6e-52PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF047J15+                             TGCAAGTAGAGAGTGGCCAAAC-GGTTAAGTGTTAATAGACG
JMFF043O17+                             TGCAAGTAGAGAGTGGCCAAACGGGTTAAGTGTTAATAGACG
                      ____________________________________________________________
consensus                               TGCAAGTAGAGAGTGGCCAAACGGGTTAAGTGTTAATAGACG
 
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JMFF047J15+           GCGGCAGAGGACCGGAGAAGTTATTGTGGGCGAGATTGAGGCGAATGAGGTTCGGTAAGG
JMFF043O17+           GCGGCAGAGGACCGGAGAAGTTATTGTGGGCGAGATTGAGGCGAATGAGGTTCGGTAAGG
                      ____________________________________________________________
consensus             GCGGCAGAGGACCGGAGAAGTTATTGTGGGCGAGATTGAGGCGAATGAGGTTCGGTAAGG
 
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JMFF047J15+           AGAAAACGGCGTCGGGGATTTGGCCGGAGAAGAAGTTGTGCTGAAGATAAACGTTTCTGA
JMFF043O17+           AGAAAACGGCGTCGGGGATTTGGCCGGAGAAGAAGTTGTGCTGAAGATAAACGTTTCTGA
                      ____________________________________________________________
consensus             AGAAAACGGCGTCGGGGATTTGGCCGGAGAAGAAGTTGTGCTGAAGATAAACGTTTCTGA
 
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JMFF047J15+           GGTCGCGTAGCGAGGAGAAAATGTCAGGCGGGAGCGGACCGGAGAGAGCATTGTACCGGA
JMFF043O17+           GGTCGCGTAGCGAGGAGAAAATGTCAGGCGGGAGCGGACCGGAGAGAGCATTGTACCGGA
                      ____________________________________________________________
consensus             GGTCGCGTAGCGAGGAGAAAATGTCAGGCGGGAGCGGACCGGAGAGAGCATTGTACCGGA
 
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JMFF047J15+           GACTAAGCGTCTGAAGGCCGGTGAGATTTCCGATACTCCCCGGCGGGATTTTCCCGGAGA
JMFF043O17+           GACTAAGCGTCTGAAGGCCGGTGAGATTTCCGATACTCCCCGGCGGGATTTTCCCGGAGA
                      ____________________________________________________________
consensus             GACTAAGCGTCTGAAGGCCGGTGAGATTTCCGATACTCCCCGGCGGGATTTTCCCGGAGA
 
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JMFF047J15+           GACCCATTCCGGGGAGGTGAAGCTCCACAACGAATTTCCTGTCGGAGGAGCACTGAACCC
JMFF043O17+           GACCCATTCCGGGGAGGTGAAGCTCCACAACGAATTTCCTGTCGGAGGAGCACTGAACCC
                      ____________________________________________________________
consensus             GACCCATTCCGGGGAGGTGAAGCTCCACAACGAATTTCCTGTCGGAGGAGCACTGAACCC
 
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JMFF047J15+           CCGGCCAAGAACACGCATTCGGCTCCGACAAGTTCCAGAGAAGAGCGCGGCCGCCCACGG
JMFF043O17+           CCGGCCAAGAACACGCATTCGGCTCCGACAAGTTCCAGAGAAGAGCGCGGCCGCCCACGG
                      ____________________________________________________________
consensus             CCGGCCAAGAACACGCATTCGGCTCCGACAAGTTCCAGAGAAGAGCGCGGCCGCCCACGG
 
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JMFF047J15+           CGGATCGGAGCGCCAAGAGCGCGGCGCGGTCGGCGGCGAGGTCAGCCGTCGTCGTGGGTG
JMFF043O17+           CGGATCGGAGCGCCAAGAGCGCGGCGCGGTCGGCGGCGAGGTCAGCCGTCGTCGTGGGTG
                      ____________________________________________________________
consensus             CGGATCGGAGCGCCAAGAGCGCGGCGCGGTCGGCGGCGAGGTCAGCCGTCGTCGTGGGTG
 
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JMFF047J15+           CGAGGAGGGAGAAGAAGAAGATGGAAATGGCGGCGAAGCAGCAGAAGACGAATTGAAACC
JMFF043O17+           CGAGGAGGGAGAAGAAGAAGATGGAAATGGCGGCGAAGCAGCAGAAGACGAATTGAAACC
                      ____________________________________________________________
consensus             CGAGGAGGGAGAAGAAGAAGATGGAAATGGCGGCGAAGCAGCAGAAGACGAATTGAAACC
 
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JMFF047J15+           TCATTTTCATAGTACAAACGTCGGAAAACTCGAAAAAAAATCTTAATTTTGTCGATTTTC
JMFF043O17+           TCATTTTCATAGTACAAACGTCGGAAAACTCGAAAAAAAATCTTAATTTTGTCGATTTTC
                      ____________________________________________________________
consensus             TCATTTTCATAGTACAAACGTCGGAAAACTCGAAAAAAAATCTTAATTTTGTCGATTTTC
 
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JMFF047J15+           TAGGCGACGCTAGTGTTCTGTCTGGATTGCTGGCTAGAAAGGAGTGGGCTTCATGTTCTT
JMFF043O17+           TAGGCGACGCTAGTGTTCTGTCTGGATTGCTGGCTAGAAAGGAGTGGGCTTCATGTTCTT
                      ____________________________________________________________
consensus             TAGGCGACGCTAGTGTTCTGTCTGGATTGCTGGCTAGAAAGGAGTGGGCTTCATGTTCTT