| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020L16 | Sequence | 507 | 003266 (5) | ref|XP_006343392.1| | 3e-15 | PREDICTED: BUD13 homolog [Solanum tuberosum] | 742 | 003024 (6) | ref|XP_009613363.1| | 3e-66 | PREDICTED: BUD13 homolog isoform X2 [Nicotiana tomentosiformis] |
| JMFF035H18 | Sequence | 601 | 003266 (5) | ref|XP_009760789.1| | 2e-19 | PREDICTED: BUD13 homolog [Nicotiana sylvestris] | 691 | 003024 (6) | ref|XP_006343392.1| | 1e-45 | PREDICTED: BUD13 homolog [Solanum tuberosum] |
| JMFF043M05 | Sequence | 613 | 003266 (5) | ref|XP_011093999.1| | 1e-29 | PREDICTED: BUD13 homolog [Sesamum indicum] | 610 | 003024 (6) | ref|XP_009613363.1| | 4e-45 | PREDICTED: BUD13 homolog isoform X2 [Nicotiana tomentosiformis] |
| JMSF040E21 | Sequence | 322 | 003266 (5) | 283 | 003266 (5) | ||||||
This contig is upended
. : . : . : . : . : . :
JMFF035H18+ GTTACTTTATCACGATATACTGGTTCAGCACNTCGG
____________________________________________________________
consensus GTTACTTTATCACGATATACTGGTTCAGCACNTCGG
. : . : . : . : . : . :
JMFF035H18+ CCACTAACTACAGCATCCAGCTCTTTAAACCTCAACCACTCGTCTTTCTTTGTTTTAGCA
____________________________________________________________
consensus CCACTAACTACAGCATCCAGCTCTTTAAACCTCAACCACTCGTCTTTCTTTGTTTTAGCA
. : . : . : . : . : . :
JMFF035H18+ ATTTCATCCTTGACATCCTTGCCAGTAACCAAACCAGTCTTTTGCCTCTGTTCTATAACA
____________________________________________________________
consensus ATTTCATCCTTGACATCCTTGCCAGTAACCAAACCAGTCTTTTGCCTCTGTTCTATAACA
. : . : . : . : . : . :
JMFF035H18+ GGCGACCGATATCGTGACTTCCTTGGAGAGGCTTGTAGATCCACGTCATGTGGAGGAGAG
____________________________________________________________
consensus GGCGACCGATATCGTGACTTCCTTGGAGAGGCTTGTAGATCCACGTCATGTGGAGGAGAG
. : . : . : . : . : . :
JMFF035H18+ TTGCAGTGCTTTTGTCTACACCGTGGTGGTGACATATCATCATCCCCTTCCTCGTCAATT
JMFF020L16+ ATCATCCTCTTCCTCATCAATT
JMFF043M05+ ATCATCCTCTTCCTCATCAATT
____________________________________________________________
consensus TTGCAGTGCTTTTGTCTACACCGTGGTGGTGACATATCATCATCCTCTTCCTCATCAATT
. : . : . : . : . : . :
JMFF035H18+ TTCACTGGTTTTTGCCAGACAGGATCCTCATCAACAATAATGACACCTGAGACATCAGTT
JMFF020L16+ TTCACTGGTTTTTGCCAGACAGGATCCTCATCAACAATAATGACACCTGAGACATCAGTT
JMFF043M05+ TTCACTGGTTTTTGCCAGACAGGATCCTCATCAACAATAATGACACCTGAGACATCAGTT
____________________________________________________________
consensus TTCACTGGTTTTTGCCAGACAGGATCCTCATCAACAATAATGACACCTGAGACATCAGTT
. : . : . : . : . : . :
JMFF035H18+ TTAGCTTTCTTTTTC-----------------ATCCTCTTCATAGCCACTTTCATA-TTT
JMFF020L16+ TTAGCTTTCTTTTTCTTCTTCTTCTTTTTCTTCTCCTCTTCATGGCCACTTTCATATTTT
JMFF043M05+ TTAGCTTTCTTTTTCTTCTTCTTCTTTTTCTTCTCCTCTTCATGGCCACTTTCATA-TTT
____________________________________________________________
consensus TTAGCTTTCTTTTTCTTCTTCTTCTTTTTCTTCTCCTCTTCATGGCCACTTTCATA-TTT
. : . : . : . : . : . :
JMFF035H18+ TGTCAGATACTCATTCAGTGATGTAGAGTCAGATGATGGAGCCACCATTCTGCCTCAATC
JMFF020L16+ TTTCAGATACTCCTTCAGTGATGTAGAGTCAGATGATGGAGCCACCATTCTGCCTCAATC
rJMSF040E21- GATACTCCTTCAGTGATGTAGAGTCAGATGATGGAGCCACCATTCTGCCTCAATC
JMFF043M05+ TTTCAGATACTCCTTCAGTGATGTAGAGTCAGATGATGGAGCCACCATTCTGCCTCAATC
____________________________________________________________
consensus TTTCAGATACTCCTTCAGTGATGTAGAGTCAGATGATGGAGCCACCATTCTGCCTCAATC
. : . : . : . : . : . :
JMFF035H18+ AACAATTCC--------------------CAGTGAACTGTCAACCCAGCTCGCGAGCTTC
JMFF020L16+ AACAACTCCCTACACCAAAAATTATTCAACAGTGAACTGTCAACCGAGCTAGCAAGCTTC
JMSF040E21+ CAGTGAACTGTCAACCGAGCTAGCAAGCTTC
rJMSF040E21- AACAACTCC--------------------CAGTGAACTGTCAACCGAGCTAGCAAGCTTC
JMFF043M05+ AACAACTCC--------------------CAGTGAACTGTCAACCGAGCTAGCAAGCTTC
____________________________________________________________
consensus AACAACTCC--------------------CAGTGAACTGTCAACCGAGCTAGCAAGCTTC
. : . : . : . : . : . :
JMFF035H18+ TGCCTGCTGCGTGCTGCCGAAAGAATCACGGAGATAC--AGAGGGCCTGCTTGCCGACGG
JMFF020L16+ TGCCTACCGCGTGCTGCCGAAAGAATCACGGAGAGACGGCGGGGGCCTGCTTGCCGACGG
JMSF040E21+ TGCCTACCGCGTGCTGCCGAAAGAATCACGGAGAGACGGCGGGGGCCTGCTTGCCGACGG
rJMSF040E21- TGCCTACCGCGTGCTGCCGAAAGAATCACGGAGAGACGGCGGGGGCCTGCTTGCCGACGG
JMFF043M05+ TGCCTACCGCGTGCTGCCGAAAGAATCACGGAGAGACGGCGGGGGCCTGCTTGCCGACGG
____________________________________________________________
consensus TGCCTACCGCGTGCTGCCGAAAGAATCACGGAGAGACGGCGGGGGCCTGCTTGCCGACGG
. : . : . : . : . : . :
JMFF035H18+ CGGAGCTGCTGCCGGTTGTCGCTGCGGTCTGCGGAGGAG
JMFF020L16+ CGGAGCTGCGGCCGGTTGTCGCTGCGGTCTGCGGAGGAGCTGCGGAAGTGCGGAGGAGTA
JMSF040E21+ CGGAGCTGCGGCCGGTTGTCGCTGCGGTCTGCGGAGGAGCTGCGGAAGTGCGGAGGAGTA
rJMSF040E21- CGGAGCTGCGGCCGGTTGTCGCTGCGGTCTGCGGAGGAGCTGCGGAAGTGCGGAGGAGTA
JMFF043M05+ CGGAGCTGCGGCCGGTTGTCGCTGCGGTCTGCGGAGGAGCTGCGGAAGTGCGGAGGAGTA
____________________________________________________________
consensus CGGAGCTGCGGCCGGTTGTCGCTGCGGTCTGCGGAGGAGCTGCGGAAGTGCGGAGGAGTA
. : . : . : . : . : . :
JMFF020L16+ GAAGGCAGAAACCTATTTCCC
JMSF040E21+ GAAGGCAGAAACCTATTTCCCTATTTTGTTTAGTTTTCTTTCTTACTCCGT
rJMSF040E21- GAAGGCAGAAACCTATTTCCCTATTTTGTTTAGTTTTCTTTCTTACTCCGT
JMFF043M05+ GAAGGCAGAAACCTATTTCCCTATTTTGTTTAGTTTTCTTTCTTACTCCGTATGTATGTT
____________________________________________________________
consensus GAAGGCAGAAACCTATTTCCCTATTTTGTTTAGTTTTCTTTCTTACTCCGTATGTATGTT