clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF043C24 | Sequence | 618 | 003264 (3) | gb|KDO54132.1| | 7e-90 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 650 | 008319 (3) | ref|XP_009794830.1| | 4e-69 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic |
JMFF046F12 | Sequence | 499 | 003264 (3) | gb|KDO54132.1| | 1e-76 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 386 | 008319 (3) | ref|XP_008242592.1| | 1e-28 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isof |
JMSF043O11 | Sequence | 711 | 003264 (3) | gb|KDO54132.1| | 8e-40 | hypothetical protein CISIN_1g012534mg [Citrus sinensis] | 535 | 008319 (3) | ref|XP_009794830.1| | 2e-68 | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic |
This contig is upended
. : . : . : . : . : . :
JMSF043O11+ ACACTACAAGACCTCAATAATATCTGAGA
____________________________________________________________
consensus ACACTACAAGACCTCAATAATATCTGAGA
. : . : . : . : . : . :
JMSF043O11+ GTTGGTTTTTGGTTGTAATCTGCTTGATATCACCACCTGCAGGTAAAATGACACACAACG
____________________________________________________________
consensus GTTGGTTTTTGGTTGTAATCTGCTTGATATCACCACCTGCAGGTAAAATGACACACAACG
. : . : . : . : . : . :
JMSF043O11+ ACTTCTGTGATCCATTGGGCTATAAAAATGATGTTGATAAAACTATACAAGTATATGACA
____________________________________________________________
consensus ACTTCTGTGATCCATTGGGCTATAAAAATGATGTTGATAAAACTATACAAGTATATGACA
. : . : . : . : . : . :
JMSF043O11+ TCAATATCTGCAGCTAAGCTACAGTTTAAGTATGCAGCATGACCACAACACATTGAGAAT
____________________________________________________________
consensus TCAATATCTGCAGCTAAGCTACAGTTTAAGTATGCAGCATGACCACAACACATTGAGAAT
. : . : . : . : . : . :
JMSF043O11+ TCGGCCAAAAGATAAGCATAGCTATTGGCTATTGGTTAATGGAAGGCTGTAGGAAAATTC
____________________________________________________________
consensus TCGGCCAAAAGATAAGCATAGCTATTGGCTATTGGTTAATGGAAGGCTGTAGGAAAATTC
. : . : . : . : . : . :
JMSF043O11+ TCATGATGCCAGAAAAACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
JMFF046F12+ ACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
JMFF043C24+ ACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
____________________________________________________________
consensus TCATGATGCCAGAAAAACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
. : . : . : . : . : . :
JMSF043O11+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
JMFF046F12+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
JMFF043C24+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
____________________________________________________________
consensus AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
. : . : . : . : . : . :
JMSF043O11+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTG--ATC
JMFF046F12+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
JMFF043C24+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
____________________________________________________________
consensus GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
. : . : . : . : . : . :
JMSF043O11+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
JMFF046F12+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
JMFF043C24+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
____________________________________________________________
consensus CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
. : . : . : . : . : . :
JMSF043O11+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
JMFF046F12+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
JMFF043C24+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
____________________________________________________________
consensus ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
. : . : . : . : . : . :
JMSF043O11+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
JMFF046F12+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
JMFF043C24+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
____________________________________________________________
consensus GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
. : . : . : . : . : . :
JMSF043O11+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
JMFF046F12+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTT
JMFF043C24+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
____________________________________________________________
consensus AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
. : . : . : . : . : . :
JMSF043O11+ CGAAGCTCCAAACAACTGTCTTT
JMFF043C24+ CGAAGCTCCAAACAACTGTCTTTGCATCGTTTTTGGTGAGAAAGTTACAAGTCGGAGAGT
____________________________________________________________
consensus CGAAGCTCCAAACAACTGTCTTTGCATCGTTTTTGGTGAGAAAGTTACAAGTCGGAGAGT