Contig 003264:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043C24Sequence618003264 (3)gb|KDO54132.1|7e-90hypothetical protein CISIN_1g012534mg [Citrus sinensis]650008319 (3)ref|XP_009794830.1|4e-69PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic
JMFF046F12Sequence499003264 (3)gb|KDO54132.1|1e-76hypothetical protein CISIN_1g012534mg [Citrus sinensis]386008319 (3)ref|XP_008242592.1|1e-28PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isof
JMSF043O11Sequence711003264 (3)gb|KDO54132.1|8e-40hypothetical protein CISIN_1g012534mg [Citrus sinensis]535008319 (3)ref|XP_009794830.1|2e-68PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Nic

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043O11+ ACACTACAAGACCTCAATAATATCTGAGA
                      ____________________________________________________________
consensus ACACTACAAGACCTCAATAATATCTGAGA
 
. : . : . : . : . : . :
JMSF043O11+ GTTGGTTTTTGGTTGTAATCTGCTTGATATCACCACCTGCAGGTAAAATGACACACAACG
                      ____________________________________________________________
consensus GTTGGTTTTTGGTTGTAATCTGCTTGATATCACCACCTGCAGGTAAAATGACACACAACG
 
. : . : . : . : . : . :
JMSF043O11+ ACTTCTGTGATCCATTGGGCTATAAAAATGATGTTGATAAAACTATACAAGTATATGACA
                      ____________________________________________________________
consensus ACTTCTGTGATCCATTGGGCTATAAAAATGATGTTGATAAAACTATACAAGTATATGACA
 
. : . : . : . : . : . :
JMSF043O11+ TCAATATCTGCAGCTAAGCTACAGTTTAAGTATGCAGCATGACCACAACACATTGAGAAT
                      ____________________________________________________________
consensus TCAATATCTGCAGCTAAGCTACAGTTTAAGTATGCAGCATGACCACAACACATTGAGAAT
 
. : . : . : . : . : . :
JMSF043O11+ TCGGCCAAAAGATAAGCATAGCTATTGGCTATTGGTTAATGGAAGGCTGTAGGAAAATTC
                      ____________________________________________________________
consensus TCGGCCAAAAGATAAGCATAGCTATTGGCTATTGGTTAATGGAAGGCTGTAGGAAAATTC
 
. : . : . : . : . : . :
JMSF043O11+ TCATGATGCCAGAAAAACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
JMFF046F12+ ACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
JMFF043C24+ ACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
                      ____________________________________________________________
consensus TCATGATGCCAGAAAAACCTTTGGAACAAGAGCAGTGGTTTTGTCCTTTTGAATTTCGGC
 
. : . : . : . : . : . :
JMSF043O11+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
JMFF046F12+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
JMFF043C24+ AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
                      ____________________________________________________________
consensus AACAACGCCCTTAATGTCCATTCCTGCACAAAAGGCACGTGGAGTGCTTCCCTCAATTAA
 
. : . : . : . : . : . :
JMSF043O11+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTG--ATC
JMFF046F12+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
JMFF043C24+ GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
                      ____________________________________________________________
consensus GACACATTTCACCTTTGGGTCTGCTTCCCATTCATCCAAAAAGCTTTTATATCTGATATC
 
. : . : . : . : . : . :
JMSF043O11+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
JMFF046F12+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
JMFF043C24+ CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
                      ____________________________________________________________
consensus CATATCTATGTTCATGGCGTTCAGAGCTTTTGGGCGGTCGAGGGTGATGACGGCGACGCC
 
. : . : . : . : . : . :
JMSF043O11+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
JMFF046F12+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
JMFF043C24+ ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
                      ____________________________________________________________
consensus ATTCGGGTGAACATTTCCTTTGACGAACTCATCGGAGCTGCTCGAAGCCATGATCGCGAA
 
. : . : . : . : . : . :
JMSF043O11+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
JMFF046F12+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
JMFF043C24+ GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
                      ____________________________________________________________
consensus GGTCCGGAAAGAGGGAAACTGCGGCGTATTTGAGTATCTAGCTCCGGCACGAAATAACGA
 
. : . : . : . : . : . :
JMSF043O11+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
JMFF046F12+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTT
JMFF043C24+ AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
                      ____________________________________________________________
consensus AGAGACGGAGCCGGCGACGAGAGCGGCGGCGGTCGATCGGCTTAGATTTAGCAAATGCTG
 
. : . : . : . : . : . :
JMSF043O11+ CGAAGCTCCAAACAACTGTCTTT
JMFF043C24+ CGAAGCTCCAAACAACTGTCTTTGCATCGTTTTTGGTGAGAAAGTTACAAGTCGGAGAGT
                      ____________________________________________________________
consensus CGAAGCTCCAAACAACTGTCTTTGCATCGTTTTTGGTGAGAAAGTTACAAGTCGGAGAGT