Contig 003263:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043B05Sequence647003263 (3)emb|CAN79024.1|1e-70hypothetical protein VITISV_022895 [Vitis vinifera]647011159 (4)ref|XP_009613096.1|2e-40PREDICTED: cullin-associated NEDD8-dissociated protein 1 [Nicotiana tomentosifo
JMFS089F10Sequence624003263 (3)emb|CAN79024.1|9e-72hypothetical protein VITISV_022895 [Vitis vinifera]
JMFS149F06Sequence633003263 (3)emb|CAN79024.1|4e-73hypothetical protein VITISV_022895 [Vitis vinifera]

Alignment

This contig is upended


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JMFS089F10+                        CCTTTATCAACTTAGGGGAGATGGAGACAAGAATAGATTGAGCAACA
JMFS149F06+                AGTTATTCCCTTTATCAACTTAGGGGAGATGGAGACAAGAATAGATTGAGCAACA
JMFF043B05+                        CCTTTATCAACTTAGGGGAGATGGAGACAAGAATAGATTGAGCAACA
                      ____________________________________________________________
consensus                  AGTTATTCCCTTTATCAACTTAGGGGAGATGGAGACAAGAATAGATTGAGCAACA
 
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JMFS089F10+           GATGAAGGAACTTCAGAAACAATTGTCTTCAATGCTATGCTTGCAATGTCTCTGTGTTGT
JMFS149F06+           GATGAAGGAACTTCAGAAACAATTGTCTTCAATGCTATGCTTGCAATGTCTCTGTGTTGT
JMFF043B05+           GATGAAGGAACTTCAGAAACAATTGTCTTCAATGCTATGCTTGCAATGTCTCTGTGTTGT
                      ____________________________________________________________
consensus             GATGAAGGAACTTCAGAAACAATTGTCTTCAATGCTATGCTTGCAATGTCTCTGTGTTGT
 
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JMFS089F10+           TCTTTCCCATTGAGCAGTTTATCACAAAGCCTGTCTGTCATGTCCAAGACTTGTTGCTCG
JMFS149F06+           TCTTTCCCATTGAGCAGTTTATCACAAAGCCTGTCTGTCATGTCCAAGACTTGTTGCTCG
JMFF043B05+           TCTTTCCCATTGAGCAGTTTATCACAAAGCCTGTCTGTCATGTCCAAGACTTGTTGCTCG
                      ____________________________________________________________
consensus             TCTTTCCCATTGAGCAGTTTATCACAAAGCCTGTCTGTCATGTCCAAGACTTGTTGCTCG
 
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JMFS089F10+           CGAACTTTCTTCACAAGAGGTGCAAGGCATTTTACAGCCAATCCAGAAACATCACCAGCT
JMFS149F06+           CGAACTTTCTTCACAAGAGGTGCAAGGCATTTTACAGCCAATCCAGAAACATCACCAGCT
JMFF043B05+           CGAACTTTCTTCACAAGAGGTGCAAGGCATTTTACAGCCAATCCAGAAACATCACCAGCT
                      ____________________________________________________________
consensus             CGAACTTTCTTCACAAGAGGTGCAAGGCATTTTACAGCCAATCCAGAAACATCACCAGCT
 
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JMFS089F10+           GCATCATCTAGCTGCTGCAAAACAACATTTGACAGCTTTGCTTCAAGTTCAGCATCAAGT
JMFS149F06+           GCATCATCTAGCTGCTGCAAAACAACATTTGACAGCTTTGCTTCAAGTTCAGCATCAAGT
JMFF043B05+           GCATCATCTAGCTGCTGCAAAACAACATTTGACAGCTTTGCTTCAAGTTCAGCATCAAGT
                      ____________________________________________________________
consensus             GCATCATCTAGCTGCTGCAAAACAACATTTGACAGCTTTGCTTCAAGTTCAGCATCAAGT
 
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JMFS089F10+           TTAAATCCCTCTTTGTTCAGTTCATTTAGCAAATCAGAAGTTGCCATGTATCTGTAATCC
JMFS149F06+           TTAAATCCCTCTTTGTTCAGTTCATTTAGCAAATCAGAAGTTGCCATGTATCTGTAATCC
JMFF043B05+           TTAAATCCCTCTTTGTTCAGTTCATTTAGCAAATCAGAAGTTGCCATGTATCTGTAATCC
                      ____________________________________________________________
consensus             TTAAATCCCTCTTTGTTCAGTTCATTTAGCAAATCAGAAGTTGCCATGTATCTGTAATCC
 
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JMFS089F10+           TTATCCTTCCCAGTCATCTTCTCAAGTATCGTAGTTATGGCCATATTTGCCATTGTTGCA
JMFS149F06+           TTATCCTTCCCAGTCATCTTCTCAAGTATCGTAGTTATGGCCATATTTGCCATTGTTGCA
JMFF043B05+           TTATCCTTCCCAGTCATCTTCTCAAGTATCGTAGTTATGGCCATATTTGCCATTGTTGCA
                      ____________________________________________________________
consensus             TTATCCTTCCCAGTCATCTTCTCAAGTATCGTAGTTATGGCCATATTTGCCATTGTTGCA
 
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JMFS089F10+           AACCTCTATAGATGTACTTTTCCTGAGATTCACCAAAAGGTGATAACAGCTTGTTGGTTC
JMFS149F06+           AACCTCTATAGATGTACTTTTCCTGAGATTCACCAAAAGGTAATAACAGCTTGTTGGTTC
JMFF043B05+           AACCTCTATAGATGTACTTTTCCTGAGATTCACCAAAAGGTGATAACAGCTTGTTGGTTC
                      ____________________________________________________________
consensus             AACCTCTATAGATGTACTTTTCCTGAGATTCACCAAAAGGTGATAACAGCTTGTTGGTTC
 
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JMFS089F10+           GCAGTGGGGCTGTGGATGAGGACCTCACATCCAAGTGGCAAGCGCCGAGTGCGTGTAGGT
JMFS149F06+           GCAGTGGGGCTGTGGATGAGGACCTCACATCCAAGTGGCAAGCGCCGAGTGCGTGTAGGT
JMFF043B05+           GCAGTGGGGCTGTGGATGAGGACCTCACATCCAAGTGGCAAGCGCCGAGTGCGTGTAGGT
                      ____________________________________________________________
consensus             GCAGTGGGGCTGTGGATGAGGACCTCACATCCAAGTGGCAAGCGCCGAGTGCGTGTAGGT
 
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JMFS089F10+           ATAACGTAAAGTGTGCGGTATGATCGATCCGTATTAGGGTTGCTTTTCGCCTTAAACCCT
JMFS149F06+           ATAACGTAAAGTGTGCGGTATGATCGATCCGTATTAGGGTTGCTTTTCGCCTTAAACCCT
JMFF043B05+           ATAACGTAAAGTGTGCGGTATGATCGATCCGTATTAGGGTTGCTTTTCGCCTTAAACCCT
                      ____________________________________________________________
consensus             ATAACGTAAAGTGTGCGGTATGATCGATCCGTATTAGGGTTGCTTTTCGCCTTAAACCCT
 
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JMFS089F10+           GTGAGGGAGTGATGTCAGAGAGCAGAGGCGTGGCG                         
JMFS149F06+           GTGAGGGAGTGATGTCAGAGAGCAGAGGCGTGGCG                         
JMFF043B05+           GTGAGGGAGTGATGTCAGAGAGCAGAGGCGTGGCGGAGTGAGTTACCCAGTGGCTATGTC
                      ____________________________________________________________
consensus             GTGAGGGAGTGATGTCAGAGAGCAGAGGCGTGGCGGAGTGAGTTACCCAGTGGCTATGTC