Contig 003260:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016O08Sequence531003260 (8)
JMFF034E05Sequence451003260 (8)769006934 (2)gb|ADE77861.1|6e-82unknown [Picea sitchensis]
JMFF042J09Sequence644003260 (8)520006934 (2)gb|ADE77861.1|3e-15unknown [Picea sitchensis]
JMFS025G03Sequence620003260 (8)emb|CAN77676.1|1e-07hypothetical protein VITISV_013722 [Vitis vinifera]
JMFS026D02Sequence642003260 (8)
JMFS037G11Sequence537003260 (8)
JMFS053A08Sequence569003260 (8)
JMFS078C05Sequence641003260 (8)ref|XP_011072424.1|5e-68PREDICTED: serine/threonine-protein kinase STE20-like isoform X2 [Sesamum indic

Alignment

This contig is upended


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JMFS078C05+                    CCAAGCATATCCATTACCATTATATAATAATCACCTTGTTGGCCTTTATAG
                      ____________________________________________________________
consensus                      CCAAGCATATCCATTACCATTATATAATAATCACCTTGTTGGCCTTTATAG
 
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JMFS078C05+           TGCACTCGCGGTACACCATGACTGCCCCCAAGAGTGTTGTAAACCTGCCATTCATAAGGT
                      ____________________________________________________________
consensus             TGCACTCGCGGTACACCATGACTGCCCCCAAGAGTGTTGTAAACCTGCCATTCATAAGGT
 
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JMFS078C05+           GGTCCATAGCTGCATCCTTTACCATTTCGATGCTCAAATTTCAAAGCCACTTCTATTGCT
                      ____________________________________________________________
consensus             GGTCCATAGCTGCATCCTTTACCATTTCGATGCTCAAATTTCAAAGCCACTTCTATTGCT
 
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JMFS078C05+           CCAGGGCCGGTTCTGTCAATTGCATTACCACCAGAAATACGGCGACCAACATAGACTTGT
                      ____________________________________________________________
consensus             CCAGGGCCGGTTCTGTCAATTGCATTACCACCAGAAATACGGCGACCAACATAGACTTGT
 
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JMFS078C05+           CCAAAGCCTCCTTTGCCAAGCTTTCTTTCTATCTTGTATAGTGGTGAACCACCTACTTGA
JMFS025G03+                                                               CTACTTGA
                      ____________________________________________________________
consensus             CCAAAGCCTCCTTTGCCAAGCTTTCTTTCTATCTTGTATAGTGGTGAACCACCTACTTGA
 
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JMFS078C05+           ACCTTTTCAGGAAGGGGGGCTGCGCTCCCATCATCCTCAGCAGCATGACCTTTTTCAGGG
JMFS025G03+           ACCTTTTCAGGAAGGGGGGNTGCGCTCCCATCATCCTCAGCAGCATGACCTTTTTCAGGG
JMFS026D02+                                                              TTTTCAGGG
                      ____________________________________________________________
consensus             ACCTTTTCAGGAAGGGGGGCTGCGCTCCCATCATCCTCAGCAGCATGACCTTTTTCAGGG
 
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JMFS078C05+           CTCTTAGCACCACTATCAAAATCATCCATGGCCTTGTCGCCAACTTCCTCTCTCTTCTTA
JMFS025G03+           CTCTTAGCACCACTATCAAAATCATCCATGGCCTTGTCGCCAACTTCCTCTCTCTTCTTA
JMFF016O08+                                                                CTTCTTA
JMFS053A08+                                                           TCTCTCTTCTTA
JMFS026D02+           CTCTTAGCACCACTATCANAATCATCCATGGCCTGGTCGCCAACTTCCTCTCTCTTCTTA
JMFF042J09+                              AATCATCCATGGCCTTGTCGCCAACTTCCTCTCTC-TCTTA
                      ____________________________________________________________
consensus             CTCTTAGCACCACTATCAAAATCATCCATGGCCTTGTCGCCAACTTCCTCTCTCTTCTTA
 
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JMFS078C05+           GCTCGAACTGCTTCTTCCTTCTCTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFS025G03+           GCTCGAACTGCTTCTTCCTTCTCTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFF034E05+                                TCTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFF016O08+           GCTCGAACTGCTTCTTCCTTCTCTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFS053A08+           GCTCGAACTGCTTCTTCCTTCTNTACAGCTNGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFS026D02+           GCTCGAACTGCTTCTTCCTTCTNTACAGCTNGACCCTCCGCCGCCGCCGCCGCTGCAGCT
JMFS037G11+                                                 CGCCGCCGCCGCCGNTGCAGNT
JMFF042J09+           GCTCGAACTGCTTCTTCCTTCTTTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
                      ____________________________________________________________
consensus             GCTCGAACTGCTTCTTCCTTCTCTACAGCTCGACCCTCCGCCGCCGCCGCCGCTGCAGCT
 
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JMFS078C05+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFS025G03+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFF034E05+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFF016O08+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFS053A08+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFS026D02+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFS037G11+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
JMFF042J09+           GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
                      ____________________________________________________________
consensus             GCAGGTGGTATCCGACCTACGTTCTCATCCACAGGCGGCGTCGCCGCCGCCGCTGCCGCC
 
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JMFS078C05+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFS025G03+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFF034E05+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFF016O08+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFS053A08+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFS026D02+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFS037G11+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
JMFF042J09+           GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
                      ____________________________________________________________
consensus             GCTCTCCTCCTCCTGGTCCTCGCAGCAATCGCCTCACCCTCAATCGGAGTCTGGTCGTTA
 
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JMFS078C05+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCC          
JMFS025G03+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFF034E05+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFF016O08+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFS053A08+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFS026D02+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFS037G11+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
JMFF042J09+           TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
                      ____________________________________________________________
consensus             TTAGTGTTCGGCTGTGTCTCCGCCTCTGGCTGCTGCTTCGGTCTCCGGCCTCTGCGCGCT
 
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JMFS025G03+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFF034E05+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFF016O08+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFS053A08+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFS026D02+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFS037G11+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
JMFF042J09+           CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
                      ____________________________________________________________
consensus             CCACCACGCAGCACTGGCATCGTTCATCGTCCGATTCTCATCCTCTCAATTCTCAAACCC
 
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JMFS025G03+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFF034E05+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFF016O08+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFS053A08+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFS026D02+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFS037G11+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
JMFF042J09+           TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
                      ____________________________________________________________
consensus             TAATGAATTTATCACAACGCCCACTCTCTTCCTCCGCACACACTAAACAAAACCTTACCA
 
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JMFS025G03+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFF034E05+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFF016O08+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFS053A08+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFS026D02+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFS037G11+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
JMFF042J09+           ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
                      ____________________________________________________________
consensus             ATATAATAATACGCGTTTTTCCAGAAAACCTATCCCAGAAAAGAATCGAAGCTTAAAGAG
 
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JMFS025G03+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTT           
JMFF034E05+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGAT        
JMFF016O08+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
JMFS053A08+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
JMFS026D02+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
JMFS037G11+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
JMFF042J09+           AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
                      ____________________________________________________________
consensus             AAGAGTAGCGATCGACGAGTATATAAACACGAGAGAGCTGAAAGCAGTTGATGATCACAG
 
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JMFF016O08+           AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTAC                
JMFS053A08+           AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTACAGTTTTGGAAAAATGA
JMFS026D02+           AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTACAGTTTTGGAAAAATGA
JMFS037G11+           AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTACAGTTTTGGAAAAATGA
JMFF042J09+           AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTACAGTTTTGGAAAAATGA
                      ____________________________________________________________
consensus             AAGAATTAGCGTTTCGTGGGTTAAAGAGGATTAGGGATCTGTACAGTTTTGGAAAAATGA
 
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JMFS053A08+           GGAAAGAAAGAGAGAGA                                           
JMFS026D02+           GGAAAGAAAGAGAGAGA                                           
JMFS037G11+           GGAAAGAAAGAGAGAGAAAGAGGAAGAAAGAGAGA                         
JMFF042J09+           GGAAAGAAAGAGAGAGAAAGAGGAAGAAAGAGAGACAGACGAATAGAGAGAGAGAGATAT
                      ____________________________________________________________
consensus             GGAAAGAAAGAGAGAGAAAGAGGAAGAAAGAGAGACAGACGAATAGAGAGAGAGAGATAT