Contig 003258:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF042G18-                          AGACCTGACAAGTGTTGCATTGCATGGTGGAAAAAACAGTTTCT
                      ____________________________________________________________
consensus                             AGACCTGACAAGTGTTGCATTGCATGGTGGAAAAAACAGTTTCT
 
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rJMFF042G18-          AGCAATGTACAAATATTATTCGAATTCAGATACAGAGATTAAGGAAGGAACTGATATCAT
rJMSF018I02-                                     AGATACAGAGATTAAGGAAGGAACTGATATCAT
                      ____________________________________________________________
consensus             AGCAATGTACAAATATTATTCGAATTCAGATACAGAGATTAAGGAAGGAACTGATATCAT
 
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rJMFF042G18-          CTTTCAAGTTGTACTTAATAATGAAGTGATAGCATAAATTAACTGGGTGGCCTATATCAG
rJMSF018I02-          CTTTCAAGTTGTACTTAATAATGAAGTGATAGCATAAATTAACTGGGTGGCCTATATCAG
                      ____________________________________________________________
consensus             CTTTCAAGTTGTACTTAATAATGAAGTGATAGCATAAATTAACTGGGTGGCCTATATCAG
 
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rJMFF042G18-          TTCTTCGTGAACTACTTTGACAAAAATCCACTGTTTCATACTTGACACTTATCATGATAG
rJMSF018I02-          TTCTTCGTGAACTACTTTGACAAAAATCCACTGTTTCATACTTGACACTTATCATGATAG
                      ____________________________________________________________
consensus             TTCTTCGTGAACTACTTTGACAAAAATCCACTGTTTCATACTTGACACTTATCATGATAG
 
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rJMFF042G18-          AAAAGGCTTTGATTTAGGGACTAAATCTATGTGAGCATTGAAGTCATAGCTAATGGACAC
rJMSF018I02-          AAAAGGCTTTGATTTAGGGACTAAATCTATGTGAGCATTGAAGTCATAGCTAATGGACAC
                      ____________________________________________________________
consensus             AAAAGGCTTTGATTTAGGGACTAAATCTATGTGAGCATTGAAGTCATAGCTAATGGACAC
 
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rJMFF042G18-          CAGAATATAAGTTTTTTTTTTACCGTAATGTGATTCAAGGCTTCCTCATTTTAGATCTAG
rJMSF018I02-          CAGAATATAAGTTTTTTTTTTACCGTAANGTGATTCAAGGCTTCCTCATTTTANATCTAG
                      ____________________________________________________________
consensus             CAGAATATAAGTTTTTTTTTTACCGTAATGTGATTCAAGGCTTCCTCATTTTAGATCTAG
 
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rJMFF042G18-          CATATTCTATATGCATGCCACCCCGATCTGACGAAGGCAATGAGCTTCCTTGAAGTGCAT
rJMSF018I02-          CATATTCTATATGCATGCCACCCCGATCTGACGAAGGCAATGAGCTTCCTTGAAGTGCAT
                      ____________________________________________________________
consensus             CATATTCTATATGCATGCCACCCCGATCTGACGAAGGCAATGAGCTTCCTTGAAGTGCAT
 
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rJMFF042G18-          TCATGACCTGGGTCGCTTCTTCAACACCCTCAAAATCAGCAAAAGCAACTGGCATTCCAC
rJMSF018I02-          TCATGACCTGGGTCGCTTCTTCAACACCCTCAAAATCAGCAAAAGCAACTGGCATTCCAC
                      ____________________________________________________________
consensus             TCATGACCTGGGTCGCTTCTTCAACACCCTCAAAATCAGCAAAAGCAACTGGCATTCCAC
 
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rJMFF042G18-          CTCTAGCACGAACCTTCAGGGTGTTGAATCCAGGGTACTGTGAAAGAATTTTCCTAAGTT
rJMSF018I02-          CTCTAGCACGAACCTTCAGGGNGTTGAATCCAGGGTACTGTGAAAGAATTTTCCTAAGTT
                      ____________________________________________________________
consensus             CTCTAGCACGAACCTTCAGGGTGTTGAATCCAGGGTACTGTGAAAGAATTTTCCTAAGTT
 
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rJMFF042G18-          CATCTTCAGTACAGTTGGGCCCGAGATTGGCAATAAATAAAGTGGAACATGGATGAGTAC
rJMSF018I02-          CATCTTCAGTACAGTTGGGCCCGAGATTGGCAATAAATAAAGNGGAACATGGATGAGTAC
                      ____________________________________________________________
consensus             CATCTTCAGTACAGTTGGGCCCGAGATTGGCAATAAATAAAGTGGAACATGGATGAGTAC
 
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rJMFF042G18-          CATCTCCTATTTTCTCAATCTGTTCACTTT                              
rJMSF018I02-          CATCTCCTATTTTCTCAATCTGTTCACTTTGNGCAGCTAAAACATTATCACCATCACCCA
                      ____________________________________________________________
consensus             CATCTCCTATTTTCTCAATCTGTTCACTTTGNGCAGCTAAAACATTATCACCATCACCCA
 
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rJMSF018I02-          CTTTCTCACCACTCTTCTCANACGAATCATCATTGTTGCCAGAATCAGGATCATTGGATC
JMFF042G18+                                                 CCAGAATCAGGATCATTGGATC
                      ____________________________________________________________
consensus             CTTTCTCACCACTCTTCTCANACGAATCATCATTGTTGCCAGAATCAGGATCATTGGATC
 
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rJMSF018I02-          TTGATGGGTCATCANAATCACTATCATTTGAATCTTCATCACTTGAAGTGCCTTTGGCAT
JMFF042G18+           TTGATGGGTCATCAGAATCACTATCATTTGAATCTTCATCACTTGAAGTGCCTTTGGCAT
                      ____________________________________________________________
consensus             TTGATGGGTCATCAGAATCACTATCATTTGAATCTTCATCACTTGAAGTGCCTTTGGCAT
 
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rJMSF018I02-          CTGTATNGGATTTAGATCTGTTATCAATAACAACATAGGGCCCACTCCC           
JMFF042G18+           CTGTATTGGATTTAGATCTGTTATCAATAACAACATAGGGCCCACTCCCTGGTCTCTTTG
                      ____________________________________________________________
consensus             CTGTATTGGATTTAGATCTGTTATCAATAACAACATAGGGCCCACTCCCTGGTCTCTTTG
 
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JMSF018I02+                         GATCTGGCAATTTCAATGTGCAAAGTGGATCCTGTTTGAGGATCAA
JMFF042G18+           TCCTCCTGGAGTTTGATCTGGCAATTTCAATGTGCAAAGTGGATCCTGTTTGAGGATCAA
                      ____________________________________________________________
consensus             TCCTCCTGGAGTTTGATCTGGCAATTTCAATGTGCAAAGTGGATCCTGTTTGAGGATCAA
 
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JMSF018I02+           ACTTCACACCATTTAACGAGTGCAATGCTGCCATTGCTGATTGATGATCTACAAAGGTGG
JMFF042G18+           ACTTCACACCATTTAACGAGTGCAATGCTGCCATTGCTGATTGATGATCTACAAAGGTGG
                      ____________________________________________________________
consensus             ACTTCACACCATTTAACGAGTGCAATGCTGCCATTGCTGATTGATGATCTACAAAGGTGG
 
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JMSF018I02+           CAAATGCAACAACCTGATCTCCGCGACCAGTGTACTTGAGCTGACAAGACTCGAAGCCGG
JMFF042G18+           CAAATGCAACAACCTGATCTCCGCGACCAGTGTACTTGAGCTGACAAGACTCGAAGCCGG
                      ____________________________________________________________
consensus             CAAATGCAACAACCTGATCTCCGCGACCAGTGTACTTGAGCTGACAAGACTCGAAGCCGG
 
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JMSF018I02+           GACGGCGGCGGAAGAGATTGTGAATTTCACGAGCTTTAACGTCGTCTGGGAGGCCGGACA
JMFF042G18+           GACGGCGGCGGAAGGGATTGTGAATTTCACGAGCTTTAACGTCGTCTGGGAGGCCGGACA
                      ____________________________________________________________
consensus             GACGGCGGCGGAAGGGATTGTGAATTTCACGAGCTTTAACGTCGTCTGGGAGGCCGGACA
 
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JMSF018I02+           CGAATAGGGTTCGAATCATATCGCGTTCGTTTTTATTACCGACGGTGTAGCCGTAATCTG
JMFF042G18+           CGAATAGGGTTCGAATCATATCGCGTTCGTTTTTATTACCGACGGTGTAGCCGTAATCTG
                      ____________________________________________________________
consensus             CGAATAGGGTTCGAATCATATCGCGTTCGTTTTTATTACCGACGGTGTAGCCGTAATCTG
 
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JMSF018I02+           GAATGGGTAGTGGTTGGGGGCGGTAGTAAGGGTCGTAGGGCTGGTGGAGAGCCATCTCTT
JMFF042G18+           GAATGGGTAGTGGTTGGGGGCGGTAGTAAGGGTCGTAGGGCTGGTGGAGAGCCATCTCTT
                      ____________________________________________________________
consensus             GAATGGGTAGTGGTTGGGGGCGGTAGTAAGGGTCGTAGGGCTGGTGGAGAGCCATCTCTT
 
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JMSF018I02+           CTCTCCGTCGGAGGTCGTCGAGCGTAGCGGTGGCAGATGATTAATTATAGAGACTGCGAA
JMFF042G18+           CTCTCCGTCGGAGGTCGTCGAGCGTAGCGGTGGCAGATGATTAATTATAGAGACTGCGAA
                      ____________________________________________________________
consensus             CTCTCCGTCGGAGGTCGTCGAGCGTAGCGGTGGCAGATGATTAATTATAGAGACTGCGAA
 
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JMSF018I02+           GTCTACACAAATTCCCGTGGCTAGTTTCGTCGGAGAAAAAGTATTCGGTC          
JMFF042G18+           GTCTACACAAATTCCCGTGGCTAGTTTCGTCGGAGAAAAAGTATTCGGTCTCGAGTCATG
                      ____________________________________________________________
consensus             GTCTACACAAATTCCCGTGGCTAGTTTCGTCGGAGAAAAAGTATTCGGTCTCGAGTCATG