Contig 003257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K13Sequence542003257 (2)ref|XP_011078811.1|3e-108PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Sesamum indicu733011151 (2)ref|XP_010312071.1|9e-35PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Solanum lycope
JMFF042C20Sequence630003257 (2)ref|XP_009628616.1|1e-130PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana tome616011151 (2)gb|ACN27128.1|1e-07unknown [Zea mays]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF042C20+ TGAACATTCACATGAGTATNTGCCACACAA
                      ____________________________________________________________
consensus TGAACATTCACATGAGTATNTGCCACACAA
 
. : . : . : . : . : . :
JMFF005K13+ ACC
JMFF042C20+ ACAAGCTGACGCTTCCCAGGGTTATCAACTCCCTGGTTACCGAACTTTGCCTCGAGAACC
                      ____________________________________________________________
consensus ACAAGCTGACGCTTCCCAGGGTTATCAACTCCCTGGTTACCGAACTTTGCCTCGAGAACC
 
. : . : . : . : . : . :
JMFF005K13+ ACAATGAGTGCAACATTATCCTTGATCAAACGACCTAGAGCGGTTTTCTTTTGAGCACTG
JMFF042C20+ ACAATGAGTGCAACATTATCCTTGATCAAACGACCTAGAGCGGTTTTCTTTTGAGCACTG
                      ____________________________________________________________
consensus ACAATGAGTGCAACATTATCCTTGATCAAACGACCTAGAGCGGTTTTCTTTTGAGCACTG
 
. : . : . : . : . : . :
JMFF005K13+ GGAACTAGAGCATCAGTCAACGACTGTGCAGCTTTGTTAAACTCAACCTCATATTTCTTA
JMFF042C20+ GGAACTAGAGCATCAGTCAACGACTGTGCAGCTTTGTTAAACTCAACCTCATATTTCTTA
                      ____________________________________________________________
consensus GGAACTAGAGCATCAGTCAACGACTGTGCAGCTTTGTTAAACTCAACCTCATATTTCTTA
 
. : . : . : . : . : . :
JMFF005K13+ ACATGTGAAAATCTATCTCGCCGGAAAAATGTAGCACAACCATCAATACTATTCATATTT
JMFF042C20+ ACATGTGAAAATCTATCTCGCCGGAAAAATGTAGCACAACCATCAATACTATTCATATTT
                      ____________________________________________________________
consensus ACATGTGAAAATCTATCTCGCCGGAAAAATGTAGCACAACCATCAATACTATTCATATTT
 
. : . : . : . : . : . :
JMFF005K13+ CCACCAAATACCTCAGAAGTTTTTCTTTTGAAAAGAGCTTGATAGCCATGCTTGTCCAGC
JMFF042C20+ CCACCAAATACCTCAGAAGTTTTTCTTTTGAAAAGAGCTTGATAGCCATGCTTGTCCAGC
                      ____________________________________________________________
consensus CCACCAAATACCTCAGAAGTTTTTCTTTTGAAAAGAGCTTGATAGCCATGCTTGTCCAGC
 
. : . : . : . : . : . :
JMFF005K13+ TCAGGAGCAAAGAACTCTTCAAAATGGTCACTTTGAACCTCTTGAAGACAAACAATGCCA
JMFF042C20+ TCAGGAGCAAAGAACTCTTCAAAATGATCACTTTGAACCTCTTGAAGACAAACAATGTCA
                      ____________________________________________________________
consensus TCAGGAGCAAAGAACTCTTCAAAATGGTCACTTTGAACCTCTTGAAGACAAACAATGTCA
 
. : . : . : . : . : . :
JMFF005K13+ GCACGATAGCCAACTATTTCACGCAATAGGTTCTGCCTACGATATGTCCAAGAAAGGGCC
JMFF042C20+ GCACGATAGCCAACTATTTCACGCAATAGGTTCTGCCTACGATATGTCCAAGAAAGGGCC
                      ____________________________________________________________
consensus GCACGATAGCCAACTATTTCACGCAATAGGTTCTGCCTACGATATGTCCAAGAAAGGGCC
 
. : . : . : . : . : . :
JMFF005K13+ CAGGAGGGACAATAACTGTATAATTCACTTGTCGCATAGGAATCAGATAAGATGTTGTAT
JMFF042C20+ CAGGAGGGACAATAACTGTATAATTCACTTGTCGCATAGGAATCAGATAAGATGTTGTAT
                      ____________________________________________________________
consensus CAGGAGGGACAATAACTGTATAATTCACTTGTCGCATAGGAATCAGATAAGATGTTGTAT
 
. : . : . : . : . : . :
JMFF005K13+ GAGAGCACAGTAAACGTTCCGGAAGACGAAATGCGGCCACCTAAATCAGAAATTACAGGA
JMFF042C20+ GAGAGCACAGTAAACGTTCCGGAAGACGAAATGCGGCCACCTAAATCAGAAATTACAGGA
                      ____________________________________________________________
consensus GAGAGCACAGTAAACGTTCCGGAAGACGAAATGCGGCCACCTAAATCAGAAATTACAGGA
 
. : . : . : . : . : . :
JMFF005K13+ CCATCATCTTCTCTGACTGAAATCAAGCGACGTGGAGTAGGAGATGGAGCCGGAATCA
JMFF042C20+ CCATCATCTTCTCTGACTGAAATCAAGCGACGTGGAGTAGGAGATGGAGCCGGAATCACA
                      ____________________________________________________________
consensus CCATCATCTTCTCTGACTGAAATCAAGCGACGTGGAGTAGGAGATGGAGCCGGAATCACA