Contig 003256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042A17Sequence609003256 (2)ref|XP_009610155.1|218PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana tomentosiformis]607009770 (2)ref|XP_009769615.1|160PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana sylvestris]
JMSF036K14Sequence671003256 (2)ref|XP_009610155.1|273PREDICTED: A/G-specific adenine DNA glycosylase [Nicotiana tomentosiformis]717009770 (2)ref|XP_004246789.2|8e-74PREDICTED: A/G-specific adenine DNA glycosylase isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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JMSF036K14+                                               GGCTACATTTCCATCAACAATTGG
                      ____________________________________________________________
consensus                                                 GGCTACATTTCCATCAACAATTGG
 
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JMSF036K14+           CACTGCCTCATTAAAGGCAATGGAGGCAATGGCACCAGCTGTATATTCACCAATTCCCTT
JMFF042A17+                                                             CAATTCCCTT
                      ____________________________________________________________
consensus             CACTGCCTCATTAAAGGCAATGGAGGCAATGGCACCAGCTGTATATTCACCAATTCCCTT
 
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JMSF036K14+           AACCTTACGAAGACCAGAAACTGTGTTTGGAAAACCACAACCATCTTCAACAATCATTTT
JMFF042A17+           AACCTTACGAAGACCAG-AACTGTGTTTGGAAAACCACAACCATCTTCAACAATCATTTT
                      ____________________________________________________________
consensus             AACCTTACGAAGACCAGAAACTGTGTTTGGAAAACCACAACCATCTTCAACAATCATTTT
 
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JMSF036K14+           TGCACCCTCTAAGAGAAATCGAGCCCGTCTGTAATAGCCCAAACCTGCCCACATCTCATT
JMFF042A17+           TGCACCCTCTAAGAGAAATCGAGCCCGTCTGTAATAGCCCAAACCTGCCCACATCTCATT
                      ____________________________________________________________
consensus             TGCACCCTCTAAGAGAAATCGAGCCCGTCTGTAATAGCCCAAACCTGCCCACATCTCATT
 
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JMSF036K14+           CACTTCCTCAAGAGAAGCTCGAGCGAGGTGTTGAACAGTCGGCCATTTCTGCATCCACCG
JMFF042A17+           CACTTCCTCAAGAGAAGCTCGAGCGAGGTGTTGAACAGTCGGCCATTTCTGCATCCACCG
                      ____________________________________________________________
consensus             CACTTCCTCAAGAGAAGCTCGAGCGAGGTGTTGAACAGTCGGCCATTTCTGCATCCACCG
 
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JMSF036K14+           GTTGAAGTAATCTATCACCGTCTGAACCCTAGTTTGCTGCAGCATTACCTCCGAAACCCA
JMFF042A17+           GTTGAAGTAATCTATCACCGTCTGAACCCTAGTTTGCTGCAGCATTACCTCCGAAACCCA
                      ____________________________________________________________
consensus             GTTGAAGTAATCTATCACCGTCTGAACCCTAGTTTGCTGCAGCATTACCTCCGAAACCCA
 
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JMSF036K14+           AACCTCATAAGCCCTCCTTTCTCTCTCACCCTCATCACCATTCGCTTTAGTATCACTCGT
JMFF042A17+           AACCTCATAAGCCCTCCTTTCTCTCTCACCCTCATCACCATTCGCTTTAGTATCACTCGT
                      ____________________________________________________________
consensus             AACCTCATAAGCCCTCCTTTCTCTCTCACCCTCATCACCATTCGCTTTAGTATCACTCGT
 
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JMSF036K14+           TCTTCTCCAAGGAAGGTCCCTGCGATTGCGATCGTACCAGTGCAACAGAGAAGCCCTGAT
JMFF042A17+           TCTTCTCCAAGGAAGGTCCCTGCGATTGCGATCGTACCAGTGCAACAGAGAAGCCCTGAT
                      ____________________________________________________________
consensus             TCTTCTCCAAGGAAGGTCCCTGCGATTGCGATCGTACCAGTGCAACAGAGAAGCCCTGAT
 
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JMSF036K14+           TTTTGTGGTTTCTTCTCCGGTGAAAGCGACGGTATCCTCTATGTCTCCCCCGCAGGCGGG
JMFF042A17+           TTTTGTGGTTTCTTCTCCGGTGAAAGCGACGGTATCCTCTATGTCTCCCCCGCAGGCGGG
                      ____________________________________________________________
consensus             TTTTGTGGTTTCTTCTCCGGTGAAAGCGACGGTATCCTCTATGTCTCCCCCGCAGGCGGG
 
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JMSF036K14+           AACTTCCTTTTTGAGCCTTGCTTCAGAGCTCCGCCGAGGCCTCTTGTTCGGTTTCGAGGC
JMFF042A17+           AACTTCCTTTTTGAGCCTTGCTTCAGAGCTCCGCCGAGGCCTCTTGTTCGGTTTCGAGGC
                      ____________________________________________________________
consensus             AACTTCCTTTTTGAGCCTTGCTTCAGAGCTCCGCCGAGGCCTCTTGTTCGGTTTCGAGGC
 
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JMSF036K14+           AACGGTGTGCCTTCTCCTCTCGCCGGCGCCGGCGCCGCCGTCCATAGATGTGATTTTCGG
JMFF042A17+           AACGGTGTGCCTTCTCCTCTCGCCGGCGCCGGCGCCGCCGTCCATAGATGTGATTTTCGG
                      ____________________________________________________________
consensus             AACGGTGTGCCTTCTCCTCTCGCCGGCGCCGGCGCCGCCGTCCATAGATGTGATTTTCGG
 
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JMSF036K14+           CGACGAACGGTGGCGGTGAGCTCGTATTGT                              
JMFF042A17+           CGACGAACGGTGGCGGTGAGCTCGTATTGTAGCAGAGATAGTTTTATTTTTNCCCCGGTT
                      ____________________________________________________________
consensus             CGACGAACGGTGGCGGTGAGCTCGTATTGTAGCAGAGATAGTTTTATTTTTNCCCCGGTT