Contig 003255:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041P11Sequence614003255 (4)ref|XP_008218144.1|8e-47PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume]598003255 (4)ref|XP_011023489.1|2e-33PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X2 [Populus euphr
JMFN015J20Sequence473003255 (4)ref|XP_008218144.1|2e-47PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume]
JMFS079B09Sequence597003255 (4)ref|XP_008218144.1|1e-46PREDICTED: acyl carrier protein 1, chloroplastic [Prunus mume]

Alignment

This contig is upended


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JMFS079B09+                                                       GAAAGTCAATCAAAGT
rJMFF041P11-                                                       AAAGTCAATCAAAGT
JMFF041P11+                                                        AAAGTCAATCAAAGT
                      ____________________________________________________________
consensus                                                         GAAAGTCAATCAAAGT
 
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JMFS079B09+           TTATTAAAATCTATCATTTTAAAAGTCTTTAAAACTCTACAAAAGTCATGATTGAATACA
rJMFF041P11-          TTATTAAAATCTATCATTTTAAAAGTCTTTAAAACTCTACAAAAGTCATGATTGAATACA
JMFF041P11+           TTATTAAAATCTATCATTTTAAAAGTCTTTAAAACTCTACAAAAGTCATGATTGAATACA
                      ____________________________________________________________
consensus             TTATTAAAATCTATCATTTTAAAAGTCTTTAAAACTCTACAAAAGTCATGATTGAATACA
 
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JMFS079B09+           CCCCTAAAGCTCCAAAGCCTAGTAAGGCTATCTAAGCAGTAACCAAACACATCTTTAAAT
rJMFF041P11-          CCCCTAAAGCTCCAAAGCCTAGTAAGGCTATCTAAGCAGTAACCAAACACATCTTTAAAT
JMFN015J20+                                                               CTTTAAAT
JMFF041P11+           CCCCTAAAGCTCCAAAGCCTAGTAAGGCTATCTAAGCAGTAACCAAACACATCTTTAAAT
                      ____________________________________________________________
consensus             CCCCTAAAGCTCCAAAGCCTAGTAAGGCTATCTAAGCAGTAACCAAACACATCTTTAAAT
 
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JMFS079B09+           AAGTTCCTCTCCTGATTATTCTAGCAGCCCTTTTCCTCAATAAGCTTCTCTATAAGATCT
rJMFF041P11-          AAGTTCCTCTCCTGATTATTCTAGCAGCCCTTTTCCTCAATAAGCTTCTCTATAAGATCT
JMFN015J20+           AAGTTCCTCTCCGGATTATTCTAGCAGCCCTTTTCCTCAATAAGCTTCTCTATAAGATCT
JMFF041P11+           AAGTTCCTCTCCTGATTATTCTAGCAGCCCTTTTCCTCAATAAGCTTCTCTATAAGATCT
                      ____________________________________________________________
consensus             AAGTTCCTCTCCTGATTATTCTAGCAGCCCTTTTCCTCAATAAGCTTCTCTATAAGATCT
 
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JMFS079B09+           GCAGCATCCTGGACCGATACAATCGCCTGGGCATTGTCCTCCTCCACAGTTATGTTGAAA
rJMFF041P11-          GCAGCATCCTGGACCGATACAATCGCCTGGGCATTGTCCTCCTCCACAGTTATGTTGAAA
JMFN015J20+           GCAGCATCCTGGACCGATACAATCGCCTGGGCATTGTCCTCCTCCACAGTTATGTTGAAA
JMFF041P11+           GCAGCATCCTGGACCGATACAATCGCCTGGGCATTGTCCTCCTCCACAGTTATGTTGAAA
                      ____________________________________________________________
consensus             GCAGCATCCTGGACCGATACAATCGCCTGGGCATTGTCCTCCTCCACAGTTATGTTGAAA
 
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JMFS079B09+           GTCTCCTCAAGCCCCATCACAATTTCAACCGTATCAAGAGAATCAGCTCCGAGTTCTG-C
rJMFF041P11-          GTCTCCTCAAGCCCCATCACAATTTCAACCGTATCAAGAGAATCAGCTCCGAGTTCTGAG
JMFN015J20+           GTCTCCTCAAGCCCCATCACAATTTCAACCGTATCAAGAGAATCAGCTCCGAGTTCTG-C
JMFF041P11+           GTCTCCTCAAGCCCCATCACAATTTCAACCGTATCAAGAGAATCAGCTCCGAGTTCTG-C
                      ____________________________________________________________
consensus             GTCTCCTCAAGCCCCATCACAATTTCAACCGTATCAAGAGAATCAGCTCCGAGTTCTG-C
 
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JMFS079B09+           AAACTTGGATTCCCCACACACAGAGACATCGTCACCCAGGGCAAGCTGTTTCTTAACTAC
rJMFF041P11-          AAACTTGGATTCCCCACACACAGAGACATCGTCACCCAGGGCAAGCTGTTTCTTAACTAC
JMFN015J20+           AAACTTGGATTCCCCACACACAGAGACATCGTCACCCAGGGCAAGCTGTTTCTTAACTAC
JMFF041P11+           AAACTTGGATTCCCCACACACAGAGACATCGTCACCCAGGGCAAGCTGTTTCTTAACTAC
                      ____________________________________________________________
consensus             AAACTTGGATTCCCCACACACAGAGACATCGTCACCCAGGGCAAGCTGTTTCTTAACTAC
 
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JMFS079B09+           AGAGCAAACTTTGTCCACAGTCTCGGGCTTGGCAGCACAGGAAATCCGGAGGCCTCTTGT
rJMFF041P11-          AGAGCAAACTTTGTCCACAGTCTCGGGCTTGGCAGCACAGGAAATCCGGAGGCCTCTTGT
JMFN015J20+           AGAGCAAACTTTGTCCACAGTCTCGGGCTTGGCAGCACAGGAAATCCGGAGGCCTCTTGT
JMFF041P11+           AGAGCAAACTTTGTCCACAGTCTCGGGCTTGGCAGCACAGGAAATCCGGAGGCCTCTTGT
                      ____________________________________________________________
consensus             AGAGCAAACTTTGTCCACAGTCTCGGGCTTGGCAGCACAGGAAATCCGGAGGCCTCTTGT
 
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JMFS079B09+           ACGGAAGCTGAATGGCAGAGCTCTCTGCTGAATAGGGAATGCAACTCTTTTCAAGCTAGA
rJMFF041P11-          ACGGAAGCTGAATGGCAGAGCTCTCTGCTGAATAGGGAATGCAACTCTTTTCAAGCTAGA
JMFN015J20+           ACGGAAGCTGAATGGCAGAGCTCTCTGCTGAATAGGGAATGCAACTCTTTTCAAGCTAGA
JMFF041P11+           ACGGAAGCTGAATGGCAGAGCTCTCTGCTGAATAGGGAATGCAACTCTTTTCAAGCTAGA
                      ____________________________________________________________
consensus             ACGGAAGCTGAATGGCAGAGCTCTCTGCTGAATAGGGAATGCAACTCTTTTCAAGCTAGA
 
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JMFS079B09+           TAGCCTCATTCCCGAGTTCTGAGGTGAAACTTGAGGGCGGGAGCGAAGGGAGATCAACGA
rJMFF041P11-          TAGCCTCATTCCCGAGTTCTGAGGTGAAACTTGAGGGCGGGAGCGAAGGGAGATCAACGA
JMFN015J20+           TAGCCTCATTCCCGAGTTCTGAGGTGAAACTTGAGGGCGGGAGCGAAGGGAGATCAACGA
JMFF041P11+           TAGCCTCATTCCCGAGTTCTGAGGTGAAACTTGAGGGCGGGAGCGAAGGGAGATCAACGA
                      ____________________________________________________________
consensus             TAGCCTCATTCCCGAGTTCTGAGGTGAAACTTGAGGGCGGGAGCGAAGGGAGATCAACGA
 
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JMFS079B09+           AGCACCACCGACTGCCGCCATGTCTGCCTTCAATGGAAACCG                  
rJMFF041P11-          AGCACCACCGACTGCCGCCATGTCTGCCTTCAATGGAAACCG                  
JMFN015J20+           AGCACCACCGACTGCCGCCATGTCTGCCTTCAATGGAAACCG                  
JMFF041P11+           AGCACCACCGACTGCCGCCATGTCTGCCTTCAATGGAAACCGCAGAGTAGAATACAGCTT
                      ____________________________________________________________
consensus             AGCACCACCGACTGCCGCCATGTCTGCCTTCAATGGAAACCGCAGAGTAGAATACAGCTT