Contig 003254:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E23Sequence552003254 (3)ref|XP_009602498.1|213PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]713006921 (3)gb|KJB54312.1|6e-82hypothetical protein B456_009G028600 [Gossypium raimondii]
JMFF041G04Sequence631003254 (3)ref|XP_009602498.1|265PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]615006921 (3)ref|XP_006353504.1|116PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum]
JMFF042O01Sequence646003254 (3)ref|XP_009602498.1|278PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]620006921 (3)ref|XP_006353504.1|116PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF042O01+                     CTAAAAACTGGCTGCCGGATATTCCCCTGAATCTGGAAAACCACGGGGCT
JMFF041G04+                                        TATTCCCCTGAATCTGGAAAACCACGGGGCT
                      ____________________________________________________________
consensus                       CTAAAAACTGGCTGCCGGATATTCCCCTGAATCTGGAAAACCACGGGGCT
 
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JMFF042O01+           GCACTCCGGTTCACCCTCGAACTGGAAAACGAACCGGGGGTCCGGTTCAGACCGGACGAC
JMFF019E23+                                                       GTTCAGACCGGACGAC
JMFF041G04+           GCACTCCGGTTCACCCTCGAACTGGAAAACGAACCGNGGGTCCGGTTCAGACCGGACGAC
                      ____________________________________________________________
consensus             GCACTCCGGTTCACCCTCGAACTGGAAAACGAACCGGGGGTCCGGTTCAGACCGGACGAC
 
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JMFF042O01+           CAAATGCAGGACCGGTTCGCCGCCGAGCTTGGTCCACCCGTTCTGGAACACGACGGGCCT
JMFF019E23+           CAAATGCAGGACCGGTTCGCCGCCGAGCTTGGTCCACCCGTTCTGGAACACGACGGGCCT
JMFF041G04+           CAAATGCAGGACCGGTTCGCCGCCGAGCTTGGTCCACCCGTTCTGGAACACGACGGGCCT
                      ____________________________________________________________
consensus             CAAATGCAGGACCGGTTCGCCGCCGAGCTTGGTCCACCCGTTCTGGAACACGACGGGCCT
 
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JMFF042O01+           CGACTCCGCCCCGCTGAGATCAACGCTGACCTGCACCTCCCCGAGCAGCTTCCCGGAGGT
JMFF019E23+           CGACTCCGCCCCGCTGAGATCAACGCTGACCTGCACCTCCCCGAGCAGCTTCCCGGAGGT
JMFF041G04+           CGACTCCGCCCCGCTGAGATCAACGCTGACCTGCACCTCCCCGAGCAGCTTCCCGGAGGT
                      ____________________________________________________________
consensus             CGACTCCGCCCCGCTGAGATCAACGCTGACCTGCACCTCCCCGAGCAGCTTCCCGGAGGT
 
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JMFF042O01+           GACCCCACAGCTGCGCCCCATCCGCCCCGTGAAAACCGAGACTTTTAAGGCGACGGGCTT
JMFF019E23+           GACCCCACAGCTGCGCCCCATCCGCCCCGTGAAAACCGAGACTTTTAAGGCGACGGGCTT
JMFF041G04+           GACCCCACAGCTGCGCCCCATCCGCCCCGTGAAAACCGAGACTTTTAAGGCGACGGGCTT
                      ____________________________________________________________
consensus             GACCCCACAGCTGCGCCCCATCCGCCCCGTGAAAACCGAGACTTTTAAGGCGACGGGCTT
 
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JMFF042O01+           GCCGGAGAGGCGCTTGAGGGTGGGCGGGTCGAGGTGGAACGCGGCGGCGGAGGCGCAGGA
JMFF019E23+           GCCGGAGAGGCGCTTGAGGGTGGGCGGGTCGAGGTGGAACGCGGCGGCGGAGGCGCAGGA
JMFF041G04+           GCCGGAGAGGCGCTTGAGGGTGGGCGGGTCGAGGTGGAACGCGGCGGCGGAGGCGCAGGA
                      ____________________________________________________________
consensus             GCCGGAGAGGCGCTTGAGGGTGGGCGGGTCGAGGTGGAACGCGGCGGCGGAGGCGCAGGA
 
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JMFF042O01+           GTCCGGCGGAGACGAGTCCTTGGTGGCGGCGGAGCAGAGCGGGAGAATGGCGGTCTGGGA
JMFF019E23+           GTCCGGCGGAGACGAGTCCTTGGTGGCGGCGGAGCAGAGCGGGAGAATGGCGGTCTGGGA
JMFF041G04+           GTCCGGCGGAGACGAGTCCTTGGTGGCGGCGGAGCAGAGCGGGAGAATGGCGGTCTGGGA
                      ____________________________________________________________
consensus             GTCCGGCGGAGACGAGTCCTTGGTGGCGGCGGAGCAGAGCGGGAGAATGGCGGTCTGGGA
 
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JMFF042O01+           TGATGGGAAATTCTTTAGCTTGAGCTTGGCGTAGCATGGAGTGGTGGAGGGGTGAACTCC
JMFF019E23+           TGATGGGAAATTCTTTAGCTTGAGCTTGGCGTAGCATGGAGTGGTGGAGGGGTGAACTCC
JMFF041G04+           TGATGGGAAATTCTTTAGCTTGAGCTTGGCGTAGCATGGAGTGGTGGAGGGGTGAACTCC
                      ____________________________________________________________
consensus             TGATGGGAAATTCTTTAGCTTGAGCTTGGCGTAGCATGGAGTGGTGGAGGGGTGAACTCC
 
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JMFF042O01+           GGGACCGGCGGGTTTAGTGGCGGAGGGGAGCTTAACCGCCATTGACTCGATGATCAAACG
JMFF019E23+           GGGACCGGCGGGTTTAGTGGCGGAGGGGAGCTTAACCGCCATTGACTCGATGATCAAACG
JMFF041G04+           GGGACCGGCGGGTTTAGTGGCGGAGGGGAGCTTAACCGCCATTGACTCGATGATCAAACG
                      ____________________________________________________________
consensus             GGGACCGGCGGGTTTAGTGGCGGAGGGGAGCTTAACCGCCATTGACTCGATGATCAAACG
 
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JMFF042O01+           TACAAATGGGCATGGATCCATCTTCTTCAAACCACAGAGAGATGGGAATGGTGAAGTGAA
JMFF019E23+           TACAAATGGGCATGGATCCATCTTCTTCAAACCACAGAGAGATGGGAATGGTGAAGTGAA
JMFF041G04+           TACAAATGGGCATGGATCCATCTTCTTCAAACCACAGAGAGATGGGAATGGTGAAGTGAA
                      ____________________________________________________________
consensus             TACAAATGGGCATGGATCCATCTTCTTCAAACCACAGAGAGATGGGAATGGTGAAGTGAA
 
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JMFF042O01+           GTGATGGAGGTGAGGGGAAGAAGAAATGGAATCATGAATAGATAGCGGCAATGAAT    
JMFF019E23+           GTGATGGAGGTGAGGGGAAGAAGAAATGGAATCATGAATAGATAGCGGCAATGAAT    
JMFF041G04+           GTGATGGAGGTGAGGGGAAGAAGAAATGGAATCATGAATAGATAGCGGCAATGAATGAAT
                      ____________________________________________________________
consensus             GTGATGGAGGTGAGGGGAAGAAGAAATGGAATCATGAATAGATAGCGGCAATGAATGAAT