Contig 003250:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007B18Sequence555003250 (3)ref|XP_007131652.1|2e-116hypothetical protein PHAVU_011G0308001g [Phaseolus vulgaris] gb|ESW03646.1| hypo
JMFF040H12Sequence603003250 (3)gb|EYU35587.1|4e-124hypothetical protein MIMGU_mgv1a002152mg [Erythranthe guttata]
JMFF047D16Sequence635003250 (3)ref|XP_010312974.1|2e-136PREDICTED: MAP3K epsilon protein kinase isoform X1 [Solanum lycopersicum]468018075gb|KHG04954.1|2e-36Serine/threonine-protein kinase sepA [Gossypium arboreum]

Alignment

This contig is upended


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JMFF007B18+                   CTATAGCATCCTGATGATCAAGCCTAGAAATCAGCAATGGAGTCAAACCATT
JMFF047D16+                               GATGATCAAGCCTAGAAATCAGCAATGGAGTCAAACCATT
JMFF040H12+                                                                    ATT
                      ____________________________________________________________
consensus                     CTATAGCATCCTGATGATCAAGCCTAGAAATCAGCAATGGAGTCAAACCATT
 
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JMFF007B18+           GACAGCCAGAGTGGTGTTTATTCGTGATGATTTCGTGATAATCTTTAAGAATGGCTCCAG
JMFF047D16+           GACAGCCAGAGTGGTGTTTATTCGTGATGATTTCGTGATAATCTTNAAGAATGGCTCCAG
JMFF040H12+           GACAGCCAGAGTGGTGTTTATTCGTGATGATTTCGTGATAATCTTTAAGAATGGCTCCAG
                      ____________________________________________________________
consensus             GACAGCCAGAGTGGTGTTTATTCGTGATGATTTCGTGATAATCTTTAAGAATGGCTCCAG
 
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JMFF007B18+           TATGTGCAGAAAATGCTGCTCTGGGCAGCACTGGAAGAACTTAACCAGTTTTTGTATAGC
JMFF047D16+           TATGTGCAGAAAATGCTGCTCTGGGCAGCACTGGAAGAACTTAACCAGTTTTTGTATAGC
JMFF040H12+           TATGTGCAGAAAATGCTGCTCTGGGCAGCACTGGAAGAACTTAACCAGTTTTTGTATAGC
                      ____________________________________________________________
consensus             TATGTGCAGAAAATGCTGCTCTGGGCAGCACTGGAAGAACTTAACCAGTTTTTGTATAGC
 
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JMFF007B18+           ATCCTTTTTAAGTAATGCTTGTTCTAGCTTCCTGCTGTCATTGTCATGTGCCAAACAAAC
JMFF047D16+           ATCCTTTTTAAGTAATGCTTGTTCTAGCTTCCTGCTGTCATTGTCATGTGCCAAACAAAC
JMFF040H12+           ATCCTTTTTAAGTAATGCTTGTTCTAGCTTCCTGCTGTCATTGTCATGTGCCAAACAAAC
                      ____________________________________________________________
consensus             ATCCTTTTTAAGTAATGCTTGTTCTAGCTTCCTGCTGTCATTGTCATGTGCCAAACAAAC
 
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JMFF007B18+           AGCAATGGAATCTAATGCAGTTACAGACCAGAGCTCATCTTCAAGAAGGCTCAGGTACAC
JMFF047D16+           AGCAATGGAATCTAATGCAGTTACAGACCAGAGCTCATCTTCAAGAAGGCTCAGGTACAC
JMFF040H12+           AGCAATGGAATCTAATGCAGTTACAGACCAGAGCTCATCTTCAAGAAGGCTCAGGTACAC
                      ____________________________________________________________
consensus             AGCAATGGAATCTAATGCAGTTACAGACCAGAGCTCATCTTCAAGAAGGCTCAGGTACAC
 
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JMFF007B18+           ATCCAATCCACCGTGTGCTCTTAACTGCTCCCTAGAATTGCGTGATGCATGAGCCATATC
JMFF047D16+           ATCCAATCCACCGTGTGCTCTTAACTGCTCCCTAGAATTGCGTGATGCATGAGCCATATC
JMFF040H12+           ATCCAATCCACCGTGTGCTCTTAACTGCTCCCTAGAATTGCGTGATGCATGAGCCATATC
                      ____________________________________________________________
consensus             ATCCAATCCACCGTGTGCTCTTAACTGCTCCCTAGAATTGCGTGATGCATGAGCCATATC
 
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JMFF007B18+           GCATAGAAGAGGCAAAGCATATTGTTTCAATGGAGAACCAGACATTATAAAATGCATCAA
JMFF047D16+           GCATAGAAGAGGCAAAGCATATTGTTTCAATGGAGAACCAGACATTATAAAATGCATCAA
JMFF040H12+           GCATAGAAGAGGCAAAGCATATTGTTTCAATGGAGAACCAGACATTATAAAATGCATCAA
                      ____________________________________________________________
consensus             GCATAGAAGAGGCAAAGCATATTGTTTCAATGGAGAACCAGACATTATAAAATGCATCAA
 
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JMFF007B18+           ATGTGGGATAATTCCATTTTCTGCTGCCTGTTCTTGTCTCCTCTTATTGATCTTGCAGAG
JMFF047D16+           ATGTGGGATAATTCCATTTTCTGCTGCCTGTTCTTGTCTCCTCTTATTGATCTTGCAGAG
JMFF040H12+           ATGTGGGATAATTCCATTTTCTGCTGCCTGTTCTTGTCTCCTCTTATTGATCTTGCAGAG
                      ____________________________________________________________
consensus             ATGTGGGATAATTCCATTTTCTGCTGCCTGTTCTTGTCTCCTCTTATTGATCTTGCAGAG
 
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JMFF007B18+           GTTGAATAATGCANTGAGAACCTCATGATGGATTTGAGGAACGAGAGGCCCCTCTTTGAG
JMFF047D16+           GTTGAATAATGCATTGAGAACCTCATGATGGATTTGAGGAACGAGAGGCCCCTCTTTGAG
JMFF040H12+           GTTGAATAATGCATTGAGAACCTCATGATGGATTTGAGGAACGAGAGGCCCCTCTTTGAG
                      ____________________________________________________________
consensus             GTTGAATAATGCATTGAGAACCTCATGATGGATTTGAGGAACGAGAGGCCCCTCTTTGAG
 
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JMFF007B18+           GTCAAGGTTTGGAATCAGATATT                                     
JMFF047D16+           GTCAAGGTTTGGAATCAGATATTTGATTGCATCTGCTCGCTGAAGATGTTCTAAGCAGTG
JMFF040H12+           GTCAAGGTTTGGAATCAGATATTTGATTGCATCTGCTCGCTGAAGATGTTCTAAGCAGTG
                      ____________________________________________________________
consensus             GTCAAGGTTTGGAATCAGATATTTGATTGCATCTGCTCGCTGAAGATGTTCTAAGCAGTG
 
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JMFF047D16+           TGGGTCGGTCGAAAGGTGATTAATACACTTCAACAACTTCAAAAGAATAGGGGGC     
JMFF040H12+           TGGGTCGGTCGAAAGGTGATTAATACACTTCAACAACTTCAAAAGAATAGGGGGCGGGGA
                      ____________________________________________________________
consensus             TGGGTCGGTCGAAAGGTGATTAATACACTTCAACAACTTCAAAAGAATAGGGGGCGGGGA