| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038O05 | Sequence | 546 | 003243 (12) | gb|AAC06242.1| | 1e-17 | late embryogenis abundant protein 5 [Nicotiana tabacum] | 510 | 003243 (12) | ref|XP_009799351.1| | 2e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
| JMFF042I12 | Sequence | 527 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | 533 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
| JMFF045D12 | Sequence | 488 | 003243 (12) | ref|XP_009799351.1| | 8e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | 488 | 003243 (12) | ref|XP_009799351.1| | 8e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
| JMFN010E14 | Sequence | 513 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
| JMFN012O22 | Sequence | 510 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
| JMFN018D08 | Sequence | 521 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
| JMFN037H03 | Sequence | 486 | 003243 (12) | ref|XP_009799351.1| | 8e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
| JMFN042F21 | Sequence | 522 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
| JMFN045M23 | Sequence | 510 | 003243 (12) | ref|XP_009799351.1| | 1e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN042F21+ AACTCTAACTTATATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
JMFN010E14+ AACTCTAACTCATATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
JMFN037H03+ AATTTTATAAATTCTATAGAACTCGAAAATA
JMFN012O22+ ATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
JMFN018D08+ AATTTTATAAATTCTATAGAACTCGAAAATA
JMFN045M23+ AATTTTATAAATTCTATAGAACTCGAAAATA
JMFF042I12+ AACTCTAACTCATATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
rJMFF042I12- AACTCTAACTCATATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
rJMFF038O05- AATTTTATAAATTCTATAGAACTCGAAAATA
JMFF045D12+ GAACTCGAAAATA
rJMFF045D12- GAACTCGAAAATA
JMFF038O05+ AATTTTATAAATTCTATAGAACTCGAAAATA
____________________________________________________________
consensus AACTCTAACTCATATTATAATTTTATAAATTTTATAAATTCTATAGAACTCGAAAATA
. : . : . : . : . : . :
JMFN042F21+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFN010E14+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFN037H03+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFN012O22+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFN018D08+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFN045M23+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFF042I12+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
rJMFF042I12- TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
rJMFF038O05- TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFF045D12+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
rJMFF045D12- TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
JMFF038O05+ TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
____________________________________________________________
consensus TTTCCTTTTCTTTTATATAACTTCAAGAATCCATCATGGGCGGATCCAAACACGAGTAAT
. : . : . : . : . : . :
JMFN042F21+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFN010E14+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFN037H03+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFN012O22+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFN018D08+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFN045M23+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFF042I12+ CTCAAGCAATCAATACTTTTCAGTTTCGCCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
rJMFF042I12- CTCAAGCAATCAATACTTTTCAGTTTCGCCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
rJMFF038O05- CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFF045D12+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
rJMFF045D12- CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
JMFF038O05+ CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
____________________________________________________________
consensus CTCAAGCAATCAATACTTTTCAGTTTCGTCTAATTTGGTTGTTGAGCAGAGCCGCTCTCA
. : . : . : . : . : . :
JMFN042F21+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFN010E14+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFN037H03+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFN012O22+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFN018D08+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFN045M23+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFF042I12+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
rJMFF042I12- TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
rJMFF038O05- TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFF045D12+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
rJMFF045D12- TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
JMFF038O05+ TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
____________________________________________________________
consensus TCTCCGCCGCGTCCATCTCCTTCGCGATATTCTCCGGCCGGTAGTACCCGGTGACGGGGT
. : . : . : . : . : . :
JMFN042F21+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFN010E14+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFN037H03+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFN012O22+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFN018D08+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFN045M23+ CCGGCACCCACGAAGTTTCTTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFF042I12+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
rJMFF042I12- CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
rJMFF038O05- CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFF045D12+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
rJMFF045D12- CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
JMFF038O05+ CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
____________________________________________________________
consensus CCGGCACCCACGAAGTTTCCTTTCTCGACGCTTCTCCAGCCTTCTTCATCACCCCGCCGC
. : . : . : . : . : . :
JMFN042F21+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFN010E14+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFN037H03+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFN012O22+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFN018D08+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFN045M23+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFF042I12+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
rJMFF042I12- CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
rJMFF038O05- CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFF045D12+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
rJMFF045D12- CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
JMFF038O05+ CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCTCCCGCACAGCGACGGAG
____________________________________________________________
consensus CGGACACTTTTCCCTGCGACGCCGCGGCCGCGGCGTACCCCCT-CCGCACAGCGACGGAG
. : . : . : . : . : . :
JMFN042F21+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFN010E14+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFN037H03+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFN012O22+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFN018D08+ ACCCTGTCGGCGACGTAGGCGGAGACAAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFN045M23+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFF042I12+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
rJMFF042I12- ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
rJMFF038O05- ACCCTGTCGGCGACGTAGGCGGAGACGAGCCTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFF045D12+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
rJMFF045D12- ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
JMFF038O05+ ACCCTGTCGGCGACGTAGGCGGAGACGAGCCTGGCGTTGGAGAAAGAGCGAGCCATCTCG
____________________________________________________________
consensus ACCCTGTCGGCGACGTAGGCGGAGACGAGCTTGGCGTTGGAGAAAGAGCGAGCCATCTCG
. : . : . : . : . : . :
JMFN042F21+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFN010E14+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFN037H03+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFN012O22+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFN018D08+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFN045M23+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFF042I12+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
rJMFF042I12- TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
rJMFF038O05- TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFF045D12+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
rJMFF045D12- TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
JMFF038O05+ TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
____________________________________________________________
consensus TCGTCGATCGCTGGAAGGCAACAATTCAAAACAATTGCTTAATCGAGAGTATATAAAGCT
. : . : . : . : . : . :
JMFN042F21+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTT
JMFN010E14+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTA
JMFN037H03+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTA
JMFN012O22+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTT
JMFN018D08+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAG
JMFN045M23+ AAAGCGAAGGTGCTGGAGATTAGA
JMFF042I12+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGC
rJMFF042I12- AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGA
rJMFF038O05- AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGA
JMFF045D12+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGA
rJMFF045D12- AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGA
JMFF038O05+ AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGAAGAT
____________________________________________________________
consensus AAAGCGAAGGTGCTGGAGATTAGAAAGTAGAAAGTATGAAGTGTTTGGGCTATGGAAGAT