Contig 003240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021D24Sequence465003240 (5)ref|XP_009344150.1|4e-07PREDICTED: glycine-rich protein A3-like [Pyrus x bretschneideri]660003240 (5)ref|XP_009050225.1|4e-06hypothetical protein LOTGIDRAFT_88250, partial [Lottia gigantea] gb|ESO99082.1|
JMFF028O01Sequence542003240 (5)ref|XP_009344150.1|5e-07PREDICTED: glycine-rich protein A3-like [Pyrus x bretschneideri]710003240 (5)ref|XP_009050225.1|3e-06hypothetical protein LOTGIDRAFT_88250, partial [Lottia gigantea] gb|ESO99082.1|
JMFF038C20Sequence180003240 (5)712021304

Alignment

This contig is upended


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rJMFF021D24-                                  CATTGTGTAGGGGACAATTATGTATAGGACATTATT
rJMFF028O01-                   TAAATTCATAGAACACATTGTGTAGGGGACAATTATGTATAGGACATTATT
                      ____________________________________________________________
consensus                      TAAATTCATAGAACACATTGTGTAGGGGACAATTATGTATAGGACATTATT
 
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rJMFF021D24-          ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
rJMFF028O01-          ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
                      ____________________________________________________________
consensus             ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
 
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rJMFF021D24-          TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
rJMFF028O01-          TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
                      ____________________________________________________________
consensus             TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
 
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rJMFF021D24-          TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
rJMFF028O01-          TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
                      ____________________________________________________________
consensus             TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
 
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rJMFF021D24-          CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
rJMFF028O01-          CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
JMFF028O01+                                    CGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
                      ____________________________________________________________
consensus             CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
 
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rJMFF021D24-          GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
rJMFF028O01-          GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
JMFF028O01+           GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
                      ____________________________________________________________
consensus             GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
 
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rJMFF021D24-          AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
rJMFF028O01-          AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
JMFF028O01+           AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
JMFF021D24+                             CCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
                      ____________________________________________________________
consensus             AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
 
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rJMFF021D24-          GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
rJMFF028O01-          GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
JMFF028O01+           GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
JMFF021D24+           GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
                      ____________________________________________________________
consensus             GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
 
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rJMFF021D24-          GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
rJMFF028O01-          GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
JMFF028O01+           GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
JMFF021D24+           GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
                      ____________________________________________________________
consensus             GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
 
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rJMFF021D24-          TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
rJMFF028O01-          TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
JMFF028O01+           TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
JMFF021D24+           TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
                      ____________________________________________________________
consensus             TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
 
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rJMFF021D24-          GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
rJMFF028O01-          GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
JMFF028O01+           GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
JMFF021D24+           GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
                      ____________________________________________________________
consensus             GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
 
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rJMFF021D24-          AAATTACCAAGTTGAGA                                           
rJMFF028O01-          AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGNTATCCTTTCCTCC 
JMFF028O01+           AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
JMFF021D24+           AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
                      ____________________________________________________________
consensus             AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
 
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JMFF028O01+           CCCATTTCTCAGAGTTATCAAAACAAGAAGTAC                           
JMFF021D24+           CCCATTTCTCAGAGTTATCAAAACAAGAAGTACCTCAAAATTCGCAAACACATTCAACAA
JMFF038C20+                                           CCTCAAAATTCGCAAACACATTCAACAA
                      ____________________________________________________________
consensus             CCCATTTCTCAGAGTTATCAAAACAAGAAGTACCTCAAAATTCGCAAACACATTCAACAA
 
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JMFF021D24+           TTCTCCGACTCTAGGAACACAGATCGTGAAGCTA                          
JMFF038C20+           TTCTCCGACTCTAGGAACACAGATCGTGAAGCTACNGACGCGTGATCATCATAAACATAT
                      ____________________________________________________________
consensus             TTCTCCGACTCTAGGAACACAGATCGTGAAGCTACNGACGCGTGATCATCATAAACATAT