Contig 003239:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS104F02+                                               TTTGATAATATAAGCACAAAGCAG
                      ____________________________________________________________
consensus                                                 TTTGATAATATAAGCACAAAGCAG
 
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JMFS104F02+           TCCAATTCCCACGCCCAAAAAAGTGCTCGAGAGCAATAAATACAAGAAGTTTCCAATGAA
                      ____________________________________________________________
consensus             TCCAATTCCCACGCCCAAAAAAGTGCTCGAGAGCAATAAATACAAGAAGTTTCCAATGAA
 
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JMFS104F02+           ATGAAGCCCAATTTTTGGATCAAAACTAGTCATGTCAAAACTTTGAATAGCATTAAAAAG
                      ____________________________________________________________
consensus             ATGAAGCCCAATTTTTGGATCAAAACTAGTCATGTCAAAACTTTGAATAGCATTAAAAAG
 
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JMFS104F02+           GACCACAGATGTAGCATCATTGACGACCCCTTCTCCAAACACGAGACTGTAAAGTAGGGG
                      ____________________________________________________________
consensus             GACCACAGATGTAGCATCATTGACGACCCCTTCTCCAAACACGAGACTGTAAAGTAGGGG
 
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JMFS104F02+           CGTCTCATCCTGACTGAGCACCTGCAATGTGCAAACAGAATCGGTTGCAGCAAATATCGC
                      ____________________________________________________________
consensus             CGTCTCATCCTGACTGAGCACCTGCAATGTGCAAACAGAATCGGTTGCAGCAAATATCGC
 
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JMFS104F02+           ACCAATTGCTAAATAATCTCCAAAATCCAGAAAGTCAATGTCTAAGTGCTTGAAAATTTT
                      ____________________________________________________________
consensus             ACCAATTGCTAAATAATCTCCAAAATCCAGAAAGTCAATGTCTAAGTGCTTGAAAATTTT
 
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JMFS104F02+           GACCGCACCAAATGATATAATAGAACAGCTAATAAGTGTGCCAATAGCTCCAAACAGCAT
                      ____________________________________________________________
consensus             GACCGCACCAAATGATATAATAGAACAGCTAATAAGTGTGCCAATAGCTCCAAACAGCAT
 
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JMFS104F02+           AATTGTCATGAAGTTCACGAAAAACTGCTTCTTTTTCACTTGAAACCCCGCATTGAATAT
JMFS127E02+                             GAAAAACTGCTTCTTTTTCACTTGAAACCCCGCATTGAATAT
                      ____________________________________________________________
consensus             AATTGTCATGAAGTTCACGAAAAACTGCTTCTTTTTCACTTGAAACCCCGCATTGAATAT
 
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JMFS104F02+           TATAGGTGGCAGGAGATATATAAAGAAAAGATCTTCGCTAAAGACGAGAAGATGTGAACT
JMFS127E02+           TATAGGTGGCAGGAGATATATAAAGAAAAGATCTTCGCTAAAGACGAGAAGATGTGAACT
JMFF038C01+                                                       CGAGAAGATGTGAACT
                      ____________________________________________________________
consensus             TATAGGTGGCAGGAGATATATAAAGAAAAGATCTTCGCTAAAGACGAGAAGATGTGAACT
 
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JMFS104F02+           CTTTGCTCC                                                   
JMFS127E02+           CTTTCCTCCGCTAAGGAGCAAAATTACAACTCCGGTGCACAAACCAATTATAAGGGCAGT
JMFF038C01+           CTTTCCTCCGCTAAGGAGCAAAATTACAACTCCGGTGCACAAACCAATTATAAGGGCAGT
                      ____________________________________________________________
consensus             CTTTCCTCCGCTAAGGAGCAAAATTACAACTCCGGTGCACAAACCAATTATAAGGGCAGT
 
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JMFS127E02+           AATGGATTCGTTCACCCAGCGATTCTCCTCGAGTAGATGGCCAAGAACAATGCATGCGCA
JMFF038C01+           AATGGATTCGTTCACCCAGCGATTCTCCTCGAGTAGATGGCCAAGAACAATGCATGCGCA
                      ____________________________________________________________
consensus             AATGGATTCGTTCACCCAGCGATTCTCCTCGAGTAGATGGCCAAGAACAATGCATGCGCA
 
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JMFS127E02+           AAGCAACGCCACAAAGAGGTTCATCGACACAACGGAAGCATGATCAGACGTGAACAAATC
JMFF038C01+           AAGCAACGCCACAAAGAGGTTCATCGACACAACGGAAGCATGATCAGACGTGAACAAATC
                      ____________________________________________________________
consensus             AAGCAACGCCACAAAGAGGTTCATCGACACAACGGAAGCATGATCAGACGTGAACAAATC
 
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JMFS127E02+           CGAATTTTGGAGCAAAGAAGACAACCCGAACGCCATTTTTGTTCTTCCCCTTTTTCTACC
JMFF038C01+           CGAATTTTGGAGCAAAGAAGACAACCCGAACGCCATTTTTGTTCTTCCCCTTTTTCTACC
                      ____________________________________________________________
consensus             CGAATTTTGGAGCAAAGAAGACAACCCGAACGCCATTTTTGTTCTTCCCCTTTTTCTACC
 
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JMFS127E02+           ACAAAATCCAAAACAATCAAAACAATTTTTGCAATAAATCTTTTCCCAATGTCGTGGTTT
JMFF038C01+           ACAAAATCCAAAACAATCAAAACAATTTTTGCAATAAATCTTTTCCCAATGTCGTGGTTT
                      ____________________________________________________________
consensus             ACAAAATCCAAAACAATCAAAACAATTTTTGCAATAAATCTTTTCCCAATGTCGTGGTTT
 
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JMFS127E02+           CTGTTCACATATCCGGGTTGCCCATTCCAATCCCTCCCGAAAACATACAAATCACTTGAA
JMFF038C01+           CTGTTCACATATCCGGGTTGCCCATTCCAATCCCTCCCGAAAACATACAAATCACTTGAA
                      ____________________________________________________________
consensus             CTGTTCACATATCCGGGTTGCCCATTCCAATCCCTCCCGAAAACATACAAATCACTTGAA
 
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JMFS127E02+           AGGTGAGATGTGGGGGTAGTGTTGAAGGATGAAGAGCTTCAGACAAATGGAGGAAAATCT
JMFF038C01+           AGGTGAGATGTGGGGGTAGTGTTGAAGGATGAAGAGCTTCAGACAAATGGAGGAAAATCT
                      ____________________________________________________________
consensus             AGGTGAGATGTGGGGGTAGTGTTGAAGGATGAAGAGCTTCAGACAAATGGAGGAAAATCT
 
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JMFS127E02+           CAGGATTAACGTGACTCTCTCTTTTTCTGTTTCTCTGTCTCTATTATACGGATTTATGTA
JMFF038C01+           CAGGATTAACGTGACTCTCTCTTTTTCTGTTTCTCTGTCTCTATTATACGGATTTATGTA
                      ____________________________________________________________
consensus             CAGGATTAACGTGACTCTCTCTTTTTCTGTTTCTCTGTCTCTATTATACGGATTTATGTA
 
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JMFS127E02+           TCTATCTGTCTGAAAATTTCTGTAGCCTACATTCTCAATACGT                 
JMFF038C01+           TCTATCTGTCTGAAAATTTCTGTAGCCTACATTCTCAATACGTGTACATCCTTAATACTT
                      ____________________________________________________________
consensus             TCTATCTGTCTGAAAATTTCTGTAGCCTACATTCTCAATACGTGTACATCCTTAATACTT