| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037L04 | Sequence | 566 | 003236 (6) | emb|CDP09782.1| | 1e-32 | unnamed protein product [Coffea canephora] | 798 | 010386 (6) | ref|XP_009589208.1| | 4e-25 | PREDICTED: uncharacterized protein LOC104086600 isoform X1 [Nicotiana tomentosi |
| JMFF044F01 | Sequence | 644 | 003236 (6) | emb|CDP09782.1| | 2e-32 | unnamed protein product [Coffea canephora] | 652 | 010386 (6) | ref|XP_009589209.1| | 2e-16 | PREDICTED: uncharacterized protein LOC104086600 isoform X2 [Nicotiana tomentosi |
| JMFS060B11 | Sequence | 636 | 003236 (6) | ref|XP_010325421.1| | 7e-33 | PREDICTED: uncharacterized protein LOC101264354 isoform X3 [Solanum lycopersicu | |||||
| JMFS110D10 | Sequence | 642 | 003236 (6) | ref|XP_010325421.1| | 2e-33 | PREDICTED: uncharacterized protein LOC101264354 isoform X3 [Solanum lycopersicu | |||||
| JMFS124E03 | Sequence | 571 | 003236 (6) | ref|XP_010325421.1| | 5e-33 | PREDICTED: uncharacterized protein LOC101264354 isoform X3 [Solanum lycopersicu | |||||
| JMSF019A07 | Sequence | 374 | 003236 (6) | emb|CDP09782.1| | 2e-22 | unnamed protein product [Coffea canephora] | 781 | 010386 (6) | ref|XP_009589208.1| | 2e-25 | PREDICTED: uncharacterized protein LOC104086600 isoform X1 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMFS110D10+ CTAGTTTTGACTCCTTTATCCAGCTCGGTGGCAACCCATCCACTAA
JMFS060B11+ CAACCCATCCACTAA
____________________________________________________________
consensus CTAGTTTTGACTCCTTTATCCAGCTCGGTGGCAACCCATCCACTAA
. : . : . : . : . : . :
JMFS110D10+ ATCGCTTTGAACCACAACAGAAGAACCAATATCGGAAGGTTGCTTGCCCATTCCAGATCT
JMFS124E03+ TGCCCATTCCAGATCT
JMFS060B11+ ATCGCTTTGAACCACAACAGAAGAACCAATATCGGAAGGTTGCTTGCCCATTCCAGATCT
JMFF044F01+ AACAGAAGAACCAATATCGGAAGGTTGCTTGCCCATTCCAGATCT
____________________________________________________________
consensus ATCGCTTTGAACCACAACAGAAGAACCAATATCGGAAGGTTGCTTGCCCATTCCAGATCT
. : . : . : . : . : . :
JMFS110D10+ CAGCTTTCTAGAGGTATGACTCTGGCCACCGGTGGCTTTCTCGTTTTGAGAAACTTTATT
JMFS124E03+ CAGCTTTCTAGAGGTATGACTCTGGCCACCGGTGGCTTTCTCGTTTTGAGAAACTTTATT
JMFS060B11+ CAGCTTTCTAGAGGTATGACTCTGGCCACCGGTGGCTTTCTCGTTTTGAGAAACTTTATT
JMFF044F01+ CAGCTTTCTAGAGGTATGACTCTGGCCACCGGTGGCTTTCTCGTTNTGAGAAACTTTATT
JMFF037L04+ GCTTTCTCGTTTTGAGAAACTTTATT
____________________________________________________________
consensus CAGCTTTCTAGAGGTATGACTCTGGCCACCGGTGGCTTTCTCGTTTTGAGAAACTTTATT
. : . : . : . : . : . :
JMFS110D10+ GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
JMFS124E03+ GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
JMFS060B11+ GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
JMFF044F01+ GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
JMFF037L04+ GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
____________________________________________________________
consensus GCAAGAGGGTTCTTCAATGTTACTTTTCTTTTCCTCGCCAACGCCAATAGGGCCATTGCA
. : . : . : . : . : . :
JMFS110D10+ ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
JMFS124E03+ ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
JMFS060B11+ ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
JMFF044F01+ ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
JMFF037L04+ ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
____________________________________________________________
consensus ATTCATAGTTTTGAGATGCCGAGAAACTTCAGGCTTTGAATAGAATCTCCTTCCAAATGG
. : . : . : . : . : . :
JMFS110D10+ GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
JMFS124E03+ GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
JMFS060B11+ GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
JMFF044F01+ GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
JMSF019A07+ TGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
JMFF037L04+ GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
____________________________________________________________
consensus GTCAATGTAACACATGTAAGTTTGACCATGGGAAACGCCACTCATTCGAGTTTTCTCCTC
. : . : . : . : . : . :
JMFS110D10+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
JMFS124E03+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
JMFS060B11+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
JMFF044F01+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
JMSF019A07+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
JMFF037L04+ AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
____________________________________________________________
consensus AACCGTCCATCCAGGAGGTAACCATTCGGGAGATTTATCTGGATTCGCTGCAGTCTTCGA
. : . : . : . : . : . :
JMFS110D10+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
JMFS124E03+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
JMFS060B11+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
JMFF044F01+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
JMSF019A07+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
JMFF037L04+ ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
____________________________________________________________
consensus ACTTTGTGAATTAGTATTTCTTTCTGAGTGCCTGGTCTCACGCTGAGCAATTGCCCGGTT
. : . : . : . : . : . :
JMFS110D10+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
JMFS124E03+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
JMFS060B11+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
JMFF044F01+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
JMSF019A07+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
JMFF037L04+ TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
____________________________________________________________
consensus TTGACCACGGGAATTGCCTTTAATCTTCATATAGCAGATGACATCCTTTTTGGAATAAAA
. : . : . : . : . : . :
JMFS110D10+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
JMFS124E03+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
JMFS060B11+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
JMFF044F01+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
JMSF019A07+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
JMFF037L04+ TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
____________________________________________________________
consensus TTTTTTCCCGTTTGGTGCATTTGTATAATACTTGACTTTCCGACCGTTTTTAACTTTAAC
. : . : . : . : . : . :
JMFS110D10+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTA
JMFS124E03+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTACCAG
JMFS060B11+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTACCAG
JMFF044F01+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTACCAG
JMSF019A07+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCATTACCAG
JMFF037L04+ ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTACCAG
____________________________________________________________
consensus ATGCTCGGACCAGCCGGCCGGAAGAGGCTCTGGCGACTTTCCGGCGACCATCTTTACCAG
. : . : . : . : . : . :
JMFS124E03+ ACTTTCAAGATTCAG
JMFS060B11+ ACTTTCAAGATTCAGCAAGAA
JMFF044F01+ ACTTTCAAGATTCAGCAAGAAAGAGGTAAGAAGATGAAAGTTTGCTACGAGTTGGGTCC
JMSF019A07+ ACTTTCAAGATTCAGCAAGAAAGAGGTAAGAAGAT
JMFF037L04+ ACTTTCAAGATTCAGCAAGAAAGAGGTAAGAAGATGAAAGTTTGCTACGAGTTGGGTCCG
____________________________________________________________
consensus ACTTTCAAGATTCAGCAAGAAAGAGGTAAGAAGATGAAAGTTTGCTACGAGTTGGGTCCG