| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012F06 | Sequence | 535 | 003226 (5) | gb|KDO62110.1| | 5e-30 | hypothetical protein CISIN_1g0303881mg, partial [Citrus sinensis] | 510 | 003226 (5) | gb|KDO62110.1| | 4e-30 | hypothetical protein CISIN_1g0303881mg, partial [Citrus sinensis] |
| JMFF035G01 | Sequence | 499 | 003226 (5) | gb|KDO62110.1| | 4e-30 | hypothetical protein CISIN_1g0303881mg, partial [Citrus sinensis] | 502 | 003226 (5) | gb|KDO62110.1| | 4e-30 | hypothetical protein CISIN_1g0303881mg, partial [Citrus sinensis] |
| JMFN038P19 | Sequence | 502 | 003226 (5) | gb|KDO62110.1| | 3e-30 | hypothetical protein CISIN_1g0303881mg, partial [Citrus sinensis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN038P19+ GACAATAACAGAAGACAAGCTCAAA
____________________________________________________________
consensus GACAATAACAGAAGACAAGCTCAAA
. : . : . : . : . : . :
JMFN038P19+ CACAGCAATGCATCAGGTCATCAAACAAAATTGCCTAAATCCTTCCAAGATATCAGAATA
rJMFF035G01- AGATATCAGAATA
rJMFF012F06- AGATATCAGAATA
JMFF012F06+ GGTCATCAAACAAAATTGCCTAAATCCTTCCAAGATATCAGAATA
JMFF035G01+ AGATATCAGAATA
____________________________________________________________
consensus CACAGCAATGCATCAGGTCATCAAACAAAATTGCCTAAATCCTTCCAAGATATCAGAATA
. : . : . : . : . : . :
JMFN038P19+ TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
rJMFF035G01- TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
rJMFF012F06- TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
JMFF012F06+ TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
JMFF035G01+ TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
____________________________________________________________
consensus TCTGACGGGCAAACTGCTAGTCTTAAACAATCAATGTTCAAATCATGGAAATAGAGCAAT
. : . : . : . : . : . :
JMFN038P19+ GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
rJMFF035G01- GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
rJMFF012F06- GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
JMFF012F06+ GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
JMFF035G01+ GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
____________________________________________________________
consensus GTAGTGTATTGTTATTATCTAATTTTCACAATAGCAAAACCATTCATTTCTCCTGCTCGG
. : . : . : . : . : . :
JMFN038P19+ TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
rJMFF035G01- TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
rJMFF012F06- TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
JMFF012F06+ TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
JMFF035G01+ TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
____________________________________________________________
consensus TCTCCTCTTCCTTCTTCTCATATCGACGTTTGAACTTGGCAATTTGACCAATGCTCTCAG
. : . : . : . : . : . :
JMFN038P19+ CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
rJMFF035G01- CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
rJMFF012F06- CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
JMFF012F06+ CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
JMFF035G01+ CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
____________________________________________________________
consensus CCATCTGACGCCTTGCTCTGAAGTGATAAACCTTGCCAACCTGGTGTATCTTAGTCATCA
. : . : . : . : . : . :
JMFN038P19+ TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
rJMFF035G01- TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
rJMFF012F06- TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
JMFF012F06+ TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
JMFF035G01+ TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
____________________________________________________________
consensus TAACTGGCATCAATCTGCCACTCTGGGTCACATACGATATCCACTGCATTTGAGGATGAA
. : . : . : . : . : . :
JMFN038P19+ CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
rJMFF035G01- CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
rJMFF012F06- CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
JMFF012F06+ CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
JMFF035G01+ CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
____________________________________________________________
consensus CTCCCTTCTTCATTTTTACCCTCGTCCGGCGTCCGACAGCGTCCAATCTCTTCACCTCGT
. : . : . : . : . : . :
JMFN038P19+ CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACG
rJMFF035G01- CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACGTAG
rJMFF012F06- CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACGTAG
JMFF012F06+ CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACGTAG
JMFF035G01+ CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACGTAG
____________________________________________________________
consensus CCGGCGTCCAACGGCTCACTGACTCACTCTCACTCGCACAGTCGCACTCCGTAGACGTAG
. : . : . : . : . : . :
rJMFF035G01- AGTTTCGCAGAGAAGAACTGAAGAATATGGAAAATTGGGATTTAGGATCTTAGGGAAATT
rJMFF012F06- AGTTTCGCAGAGAAGAACTGAAGAATATGGAAAATTGGGATTTAGGATCTTAGGGAAATT
JMFF012F06+ AGTTTCGCAGAGAAGAACTGAAGAATATGGAAAATTGGGATTTAGGATCTTAGGGAAATT
JMFF035G01+ AGTTTCGCAGAGAAGAACTGAAGAATATGGAAAATTGGGATTTAGGATCTTAGGGAAATT
____________________________________________________________
consensus AGTTTCGCAGAGAAGAACTGAAGAATATGGAAAATTGGGATTTAGGATCTTAGGGAAATT