Contig 003222:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034C10Sequence465003222 (3)ref|XP_009627792.1|3e-50PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis]681009823 (3)ref|XP_009796698.1|2e-49PREDICTED: calnexin homolog 1-like [Nicotiana sylvestris]
JMFF047D09Sequence631003222 (3)ref|XP_009627792.1|7e-91PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis]602009823 (3)ref|XP_002511066.1|3e-19calnexin, putative [Ricinus communis] gb|EEF51668.1| calnexin, putative [Ricinus
JMFS168C12Sequence578003222 (3)ref|XP_009627792.1|3e-84PREDICTED: calnexin homolog 1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS168C12+                                                                   AAAA
JMFF047D09+                                        TCCCCACTCTTAGGGTTCTTATGCTTCAAAA
                      ____________________________________________________________
consensus                                          TCCCCACTCTTAGGGTTCTTATGCTTCAAAA
 
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JMFS168C12+           TGAAATGAACTTTGTTAGTTGCTCCACATTTATCAGGTCCAAACATAATAGAATAGGGAG
JMFF047D09+           TGAAATGAACTTTGTTAGTTGCTCCACATTTATCAGGTCCAAACATAATAGAATAGGGAG
                      ____________________________________________________________
consensus             TGAAATGAACTTTGTTAGTTGCTCCACATTTATCAGGTCCAAACATAATAGAATAGGGAG
 
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JMFS168C12+           ATTCATTATCAAATCCTTTGGGCAACCACCCAGCATCCTGGGGACGAAGGTACTTGATAT
JMFF047D09+           ATTCATTATCAAATCCTTTGGGCAACCACCCAGCATCCTGGGGACGAAGGTACTTGATAT
                      ____________________________________________________________
consensus             ATTCATTATCAAATCCTTTGGGCAACCACCCAGCATCCTGGGGACGAAGGTACTTGATAT
 
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JMFS168C12+           AAGCACCACCACATTCAAGCCCATTCTGGAAGCGAACTTCATATTGGAGAACAACAGTTC
JMFF047D09+           AAGCACCACCACATTCAAGCCCATTCTGGAAGCGAACTTCATATTGGAGAACAACAGTTC
JMFF034C10+                          CAAGCCCATTCTGGAAGCGAACTTCATATTGGAGAACAACAGTTC
                      ____________________________________________________________
consensus             AAGCACCACCACATTCAAGCCCATTCTGGAAGCGAACTTCATATTGGAGAACAACAGTTC
 
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JMFS168C12+           CATCTTTGAGGTTGACGACCTCATCAAGCTCCTTGACAATAGCATATTTCCTGGCTGGCT
JMFF047D09+           CATCTTTGAGGTTGACGACCTCATCAAGCTCCTTGACAATAGCATATTTCCTGGCTGGCT
JMFF034C10+           CATCTTTGAGGTTGACGACCTCATCAAGCTCCTTGACAATAGCATATTTCCTGGCTGGCT
                      ____________________________________________________________
consensus             CATCTTTGAGGTTGACGACCTCATCAAGCTCCTTGACAATAGCATATTTCCTGGCTGGCT
 
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JMFS168C12+           CACTGACAAGAAGCCCGTAATCATCGTGCCCCTCACTCTTGGAGTGTTTCCACACACCTG
JMFF047D09+           CACTGACAAGAAGCCCGTAATCATCGTGCCCCTCACTCTTGGAGTGTTTCCACACACCTG
JMFF034C10+           CACTGACAAGAAGCCCGTAATCATCGTGCCCCTCACTCTTGGAGTGTTTCCACACACCTG
                      ____________________________________________________________
consensus             CACTGACAAGAAGCCCGTAATCATCGTGCCCCTCACTCTTGGAGTGTTTCCACACACCTG
 
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JMFS168C12+           TGTAGTCCTCTTTCCCAGACACAATCCATCT                             
JMFF047D09+           TGTAGTCCTCTTTCCCAGACACAATCCATCTTCCATCAAACGCATCATCGAACGAATCGT
JMFF034C10+           TGTAGTCCTCTTTCCCAGACACAATCCATCTTCCATCAAACGCATCATCGAACGAATCGT
                      ____________________________________________________________
consensus             TGTAGTCCTCTTTCCCAGACACAATCCATCTTCCATCAAACGCATCATCGAACGAATCGT
 
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JMFF047D09+           AGAAAGTCCCATCAAAAGAAGCGTGCAGGCGAGAAACGAAGCAGGCGATGAGTAGCAGCA
JMFF034C10+           AGAAAGTCCCATCAAAAGAAGCGTGCAGGCGAGAAACGAAGCAGGCGATGAGTAGCAGCA
                      ____________________________________________________________
consensus             AGAAAGTCCCATCAAAAGAAGCGTGCAGGCGAGAAACGAAGCAGGCGATGAGTAGCAGCA
 
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JMFF047D09+           ACACGCACTGCGTGAAGATCCTCCGCTTCTTCTCCTCCATGGTGGAAGATTCAGCTCTCA
JMFF034C10+           ACACGCACTGCGTGAAGATCCTCCGCTTCTTCTCCTCCATGGTGGAAGATTCAGCTCTCA
                      ____________________________________________________________
consensus             ACACGCACTGCGTGAAGATCCTCCGCTTCTTCTCCTCCATGGTGGAAGATTCAGCTCTCA
 
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JMFF047D09+           GAAAATTCAGATGCGAAACGAACGAAAATCCGAAGATCTGAAGAATCGAAATGGTCGAGA
JMFF034C10+           GAAAATTCAGATGCGAAACGAACGAAAATCCGAAGATCTGAAGAATCGAAATGGTCGAGA
                      ____________________________________________________________
consensus             GAAAATTCAGATGCGAAACGAACGAAAATCCGAAGATCTGAAGAATCGAAATGGTCGAGA
 
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JMFF047D09+           TTTATGGATCGATCGGAGTAGGCTTTTTGGCAGTTGGAGAGAGTGAGCGCTGAATA    
JMFF034C10+           TTTATGGATCGATCGGAGTAGGCTTTTTGGCAGTTGGAGAGAGTGAGCGCTGAATACTTC
                      ____________________________________________________________
consensus             TTTATGGATCGATCGGAGTAGGCTTTTTGGCAGTTGGAGAGAGTGAGCGCTGAATACTTC