| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033N07 | Sequence | 606 | 003220 (6) | emb|CAN74510.1| | 5e-63 | hypothetical protein VITISV_015898 [Vitis vinifera] | 794 | 018038 | emb|CDP06639.1| | 9e-73 | unnamed protein product [Coffea canephora] |
| JMFS069G05 | Sequence | 641 | 003220 (6) | emb|CAN74510.1| | 4e-77 | hypothetical protein VITISV_015898 [Vitis vinifera] | |||||
| JMFS071F09 | Sequence | 642 | 003220 (6) | emb|CAN74510.1| | 3e-82 | hypothetical protein VITISV_015898 [Vitis vinifera] | |||||
| JMFS120E10 | Sequence | 616 | 003220 (6) | emb|CAN74510.1| | 5e-71 | hypothetical protein VITISV_015898 [Vitis vinifera] | |||||
| JMFS133H02 | Sequence | 626 | 003220 (6) | emb|CAN74510.1| | 2e-79 | hypothetical protein VITISV_015898 [Vitis vinifera] | |||||
| JMFS166C02 | Sequence | 621 | 003220 (6) | emb|CAN74510.1| | 4e-74 | hypothetical protein VITISV_015898 [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS133H02+ ATAAGTTCACGATCAGA
JMFS071F09+ CCAGGGGGTAATAAGTTCACGATCAGA
JMFS069G05+ CGATCAGA
____________________________________________________________
consensus CCAGGGGGTAATAAGTTCACGATCAGA
. : . : . : . : . : . :
JMFS133H02+ TCTGTCTTTCCCTTTCTCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
JMFS071F09+ TCTGTCTTNTCCTTTCTCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
JMFS166C02+ TCTTTTCCTTTCTCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
JMFS120E10+ TCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
JMFS069G05+ TCTGTCTTTTCCTTTCTCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
JMFF033N07+ CTTATC
____________________________________________________________
consensus TCTGTCTTTTCCTTTCTCTCCGCTAACAAAACTCAACATCAGATCTTCAGGCCTCTTATC
. : . : . : . : . : . :
JMFS133H02+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
JMFS071F09+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
JMFS166C02+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
JMFS120E10+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
JMFS069G05+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
JMFF033N07+ AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
____________________________________________________________
consensus AGCCTCCAAATCTTCCACATCCAAAGCTTCTTCGAGAGCTTGTGCCTGGTTGCGTGCCAA
. : . : . : . : . : . :
JMFS133H02+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
JMFS071F09+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
JMFS166C02+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
JMFS120E10+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
JMFS069G05+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
JMFF033N07+ TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
____________________________________________________________
consensus TTCAGCTCTTTCAGAAGCAAGATGCATAAAATGTTTTATCACCTCCTCAAGAGAGTTAAT
. : . : . : . : . : . :
JMFS133H02+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
JMFS071F09+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
JMFS166C02+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
JMFS120E10+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
JMFS069G05+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
JMFF033N07+ GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
____________________________________________________________
consensus GTTAACTTGCTGGCAGACAATTCGATATTGAATCAGACCATCCTTTGCAAACCTTCCCCT
. : . : . : . : . : . :
JMFS133H02+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
JMFS071F09+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
JMFS166C02+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
JMFS120E10+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
JMFS069G05+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
JMFF033N07+ TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
____________________________________________________________
consensus TCTCAAGTCAACACATAACTCTACATACTTGAACATTATTCTTTCATGCGTCTTTTGCCA
. : . : . : . : . : . :
JMFS133H02+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
JMFS071F09+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
JMFS166C02+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
JMFS120E10+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
JMFS069G05+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
JMFF033N07+ TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
____________________________________________________________
consensus TGCCCTGTACCTCCTCGAGGTAATAAAATCATGAAGAACTTGAAGCGCTTCTTGCTTTTG
. : . : . : . : . : . :
JMFS133H02+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
JMFS071F09+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
JMFS166C02+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
JMFS120E10+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
JMFS069G05+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
JMFF033N07+ CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
____________________________________________________________
consensus CCCAACATTAATCAACTCTTCAGCACGCTTCAAGGCATTTTCGGGCTTCGAAAAAGTAGC
. : . : . : . : . : . :
JMFS133H02+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
JMFS071F09+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
JMFS166C02+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
JMFS120E10+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
JMFS069G05+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
JMFF033N07+ CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAACAGACGAAA
____________________________________________________________
consensus CATTTGCTGTAGAGGTCAGATCTCTAGTACCCAAACAATAACTGAGCGAAATAGACGAAA
. : . : . : . : . : . :
JMFS133H02+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
JMFS071F09+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
JMFS166C02+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
JMFS120E10+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
JMFS069G05+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
JMFF033N07+ CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
____________________________________________________________
consensus CGGCTCGGCGTAGAGAAGCTTATCTTAGTCGGAACCCTAGCGACGCCTTCTCCGGCAACC
. : . : . : . : . : . :
JMFS133H02+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
JMFS071F09+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
JMFS166C02+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
JMFS120E10+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
JMFS069G05+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
JMFF033N07+ TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
____________________________________________________________
consensus TTTTCTAACGATTGGTCCAAGTCGGAGATTATGAGTGCACTCCTGAACGCTTCACTGGTC
. : . : . : . : . : . :
JMFS133H02+ GGCTGGTCG
JMFS071F09+ GGCTGGTCGCTGAAG
JMFS166C02+ GGCTGGTCGCTGAAGATACTAGGGT
JMFS120E10+ GGCTGGTCGCTGAAGATACTAGGGT
JMFS069G05+ GGCTGGTCGCTGAAGATACTAGGGTTAGCCGA
JMFF033N07+ GGCTGGTCGCTGAAGATACTAGGGTTAGCCGAGCTAGGGCGGTCTGACGAAACAGGAAAC
____________________________________________________________
consensus GGCTGGTCGCTGAAGATACTAGGGTTAGCCGAGCTAGGGCGGTCTGACGAAACAGGAAAC