Contig 003219:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B20Sequence470003219 (3)ref|XP_008800968.1|1e-46PREDICTED: probable UDP-arabinopyranose mutase 2 [Phoenix dactylifera]575004425 (3)ref|XP_009779067.1|4e-63PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]
JMFF033L15Sequence571003219 (3)ref|XP_007029449.1|8e-68Alpha-1,4-glucan-protein synthase family protein isoform 2 [Theobroma cacao] re699004425 (3)ref|XP_009779067.1|3e-89PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]
JMSF053G01Sequence691003219 (3)ref|XP_007029449.1|2e-99Alpha-1,4-glucan-protein synthase family protein isoform 2 [Theobroma cacao] re858004425 (3)ref|XP_009779067.1|2e-67PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF053G01+                                 CTGCCTTTGTTTGATGGCCTGTGTAGGAGCATCATAAT
                      ____________________________________________________________
consensus                                   CTGCCTTTGTTTGATGGCCTGTGTAGGAGCATCATAAT
 
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JMSF053G01+           CTGCTAAGTTAAGCCAAAGTCCACATGACAGAGCACATGATACACCAGTTCGCAAGCTAA
                      ____________________________________________________________
consensus             CTGCTAAGTTAAGCCAAAGTCCACATGACAGAGCACATGATACACCAGTTCGCAAGCTAA
 
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JMSF053G01+           AAGGGTAGCCACGAACGAAATCTGCTCCTTCACGGAAAGGGTCATATAGAGTGTTAAAGA
JMFF033L15+                                        TCACGGAAAGGGTCATATAGAGTGTTAAAGA
                      ____________________________________________________________
consensus             AAGGGTAGCCACGAACGAAATCTGCTCCTTCACGGAAAGGGTCATATAGAGTGTTAAAGA
 
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JMSF053G01+           AAAATGGGGTAGCTGGATTAGCGAGGTTGGTGATATGTTGAGCAACTGCATCTACAAGAT
JMFF033L15+           AAAATGGGGTAGCTGGATTAGCGAGGTTGGTGATATGTTGAGCAACTGCATCTACAAGAT
                      ____________________________________________________________
consensus             AAAATGGGGTAGCTGGATTAGCGAGGTTGGTGATATGTTGAGCAACTGCATCTACAAGAT
 
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JMSF053G01+           TGCCCTTATCATCTCTTGCAGGAAGGCAATCGTCGTCAACAGAGACAATGTATTTCTTGG
JMFF011B20+                     ATCTCTTGCAGGAAGGCAATCGTCGTCAACAGAGACAATGTATTTCTTGG
JMFF033L15+           TGCCCTTATCATCTCTTGCAGGAAGGCAATCGTCGTCAACAGAGACAATGTATTTCTTGG
                      ____________________________________________________________
consensus             TGCCCTTATCATCTCTTGCAGGAAGGCAATCGTCGTCAACAGAGACAATGTATTTCTTGG
 
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JMSF053G01+           TGGAAACAAGATAACCAAAATACCGGGATGAATAGCCAGAGAAATTAACAGTTGAAGACC
JMFF011B20+           TGGAAACAAGATAACCAAAATACCGGGATGAATAGCCAGAGAAATTAACAGTTGAAGACC
JMFF033L15+           TGGAAACAAGATAACCAAAATACCGGGATGAATAGCCAGAGAAATTAACAGTTGAAGACC
                      ____________________________________________________________
consensus             TGGAAACAAGATAACCAAAATACCGGGATGAATAGCCAGAGAAATTAACAGTTGAAGACC
 
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JMSF053G01+           CCATAACATGTTGCATTTCGGATTGTGTATAGACTTCATAATCAAATCCACTGGGGATCT
JMFF011B20+           CCATAACATGTTGCATTTCGGATTGTGTATAGACTTCATAATCAAATCCACTGGGGATCT
JMFF033L15+           CCATAACATGTTGCATTTCGGATTGTGTATAGACTTCATAATCAAATCCACTGGGGATCT
                      ____________________________________________________________
consensus             CCATAACATGTTGCATTTCGGATTGTGTATAGACTTCATAATCAAATCCACTGGGGATCT
 
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JMSF053G01+           TCAATTCTTCTTTGAGGTCAGGATCTTTAATAATTATAATGTGGAAACGGGAGAACACAG
JMFF011B20+           TCAATTCTTCTTTGAGGTCAGGATCTTTAATAATTATAATGTGGAAACGGGAGAACACAG
JMFF033L15+           TCAATTCTTCTTTGAGGTCAGGATCTTTAATAATTATAATGTGGAAACGGGAGAACACAG
                      ____________________________________________________________
consensus             TCAATTCTTCTTTGAGGTCAGGATCTTTAATAATTATAATGTGGAAACGGGAGAACACAG
 
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JMSF053G01+           GTCTCCATTCCTCCATAAATTGTGTAAGATCATGTTGGAGTGCACCTATAACAATATCAA
JMFF011B20+           GTCTCCATTCCTCCATAAATTGTGTAAGATCATGTTGGAGTGCACCTATAACAATATCAA
JMFF033L15+           GTCTCCATTCCTCCATAAATTGTGTAAGATCATGTTGGAGTGCACCTATAACAATATCAA
                      ____________________________________________________________
consensus             GTCTCCATTCCTCCATAAATTGTGTAAGATCATGTTGGAGTGCACCTATAACAATATCAA
 
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JMSF053G01+           CCTCATCATCTCTGATGCTGACTGGCAACATTCCATCAGATTCCATTTTGAAACAACCAC
JMFF011B20+           CCTCATCATCTCTGATGCTGACTGGCAACATTCCATCAGATTCCATTTTGAAACAACCAC
JMFF033L15+           CCTCATCATCTCTGATGCTGACTGGCAACATTCCATCAGATTCCATTTTGAAACAACCAC
                      ____________________________________________________________
consensus             CCTCATCATCTCTGATGCTGACTGGCAACATTCCATCAGATTCCATTTTGAAACAACCAC
 
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JMSF053G01+           AGCACTAAATCAAGTGTTGCCCTTTGATCAATGCTAGCACCAGTAGTAGCCGGAGAAGGA
JMFF011B20+           AGCACTAAATCAAGTGTTGCCCTTTGATCAATGCTAGCACCAGTAGTAGCCGGAGAAGGA
JMFF033L15+           AGCACTAAATCAAGTGTTGCCCTTTGATCAATGCTAGCACCAGTAGTAGCCGGAGAAGGA
                      ____________________________________________________________
consensus             AGCACTAAATCAAGTGTTGCCCTTTGATCAATGCTAGCACCAGTAGTAGCCGGAGAAGGA
 
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JMSF053G01+           TGTGCTCAAGCAAACTGGAGAGATCAAAGAAGTTAGAGGGCTAACAAGCAAT        
JMFF011B20+           TGTGCTCAAGCAAACTGGAGAGATCAAAGAAGTTAGAGGGCTAACAAGCAAT        
JMFF033L15+           TGTGCTCAAGCAAACTGGAGAGATCAAAGAAGTTAGAGGGCTAACAAGCAATATGTTTTC
                      ____________________________________________________________
consensus             TGTGCTCAAGCAAACTGGAGAGATCAAAGAAGTTAGAGGGCTAACAAGCAATATGTTTTC