Contig 003218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033K23Sequence583003218 (3)ref|XP_004248301.1|1e-81PREDICTED: uridine kinase-like protein 3 [Solanum lycopersicum] ref|XP_010327203755022359ref|XP_009620970.1|2e-101PREDICTED: uridine kinase-like protein 3 [Nicotiana tomentosiformis] ref|XP_0096
JMFS062A09Sequence627003218 (3)ref|XP_009799652.1|1e-113PREDICTED: uridine kinase-like protein 3 [Nicotiana sylvestris] ref|XP_009799653
JMSF012J15Sequence466003218 (3)ref|XP_006352545.1|7e-72PREDICTED: uridine kinase-like protein 3-like [Solanum tuberosum]132000649 (3)

Alignment

This contig is upended


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JMFS062A09+                                             TCTCTACCCTTTTCANCTGTGTCACG
                      ____________________________________________________________
consensus                                               TCTCTACCCTTTTCANCTGTGTCACG
 
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JMFS062A09+           TCTTATTCTCCTGGCAAGACGTACATCAGCATCTGTATCTACAAATATCTTCATATTCAT
                      ____________________________________________________________
consensus             TCTTATTCTCCTGGCAAGACGTACATCAGCATCTGTATCTACAAATATCTTCATATTCAT
 
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JMFS062A09+           TAGATCTCGCACACGAGGATCATGAAAAATAAGAATGCCTTCTAAAATTATGACATCTGA
                      ____________________________________________________________
consensus             TAGATCTCGCACACGAGGATCATGAAAAATAAGAATGCCTTCTAAAATTATGACATCTGA
 
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JMFS062A09+           AGGATTTACCCTTCGAGATGGAAATACATTGTTCTTGTAACACTTGAAGTCATATTTTGG
JMSF012J15+                                                         AAGTCATATTTTGG
JMFF033K23+                                     CATTGTTTTTGTAACTCTTAAAGTCATATTTTGG
                      ____________________________________________________________
consensus             AGGATTTACCCTTCGAGATGGAAATACATTGTTTTTGTAACTCTTGAAGTCATATTTTGG
 
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JMFS062A09+           GATGTCTACTGCTTGCCCATGCTTCAGTTTATCCATGACAGACAATAATTGCTCAGTGTC
JMSF012J15+           AATATCTACTGCTTCCCCATGTTTCAGCTTATCCATGATACACAACAATTGCTCAGTATC
JMFF033K23+           AATATCTACTGCTTCCCCATGTTTCAGCTTATCCATGATACACAACAATTGCTCAGTATC
                      ____________________________________________________________
consensus             AATATCTACTGCTTCCCCATGTTTCAGCTTATCCATGATACACAACAATTGCTCAGTATC
 
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JMFS062A09+           AAATGCATCAGGATGATCAAAGTTGTATTCATGAACTTTTGTTAGTTCCTCAGGTGTCAA
JMSF012J15+           AAATGCATCAGGATGGTCAAAGTTGTATTCATGAACTTTTGTAAGTTCCTCGGGTGTCAA
JMFF033K23+           AAATGCATCAGGATGGTCAAAGTTGTATTCATGAACTTTTGTAAGTTCCTCGGGTGTCAA
                      ____________________________________________________________
consensus             AAATGCATCAGGATGGTCAAAGTTGTATTCATGAACTTTTGTAAGTTCCTCGGGTGTCAA
 
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JMFS062A09+           ATTATGGTAGAAAGAATCCTGGTTAACTAGGATTACACGCTGATCACGAAGCTGCTCAAT
JMSF012J15+           ATTATGATAGAATGAATCCTGGTTAACTAGTACAACACGCTGATCATGAAGCTGTTCAAT
JMFF033K23+           ATTATGATAGAATGAATCCTGGTTAACTAGTACAACACGCTGATCATGAAGCTGTTCAAT
                      ____________________________________________________________
consensus             ATTATGATAGAATGAATCCTGGTTAACTAGTACAACACGCTGATCATGAAGCTGTTCAAT
 
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JMFS062A09+           AATCAAATCACAAACTGTGGTCTTTCCAGATGCAGCACCTCCAGCAACTCCAATCACAAA
JMSF012J15+           AATCAAATCACAAACTGTGGTCTTCCCGGATGCAGCTCCTCCAGCAACTCCAATAACAAA
JMFF033K23+           AATCAAATCACAAACTGTGGTCTTCCCGGATGCAGCTCCTCCAGCAACTCCAATAACAAA
                      ____________________________________________________________
consensus             AATCAAATCACAAACTGTGGTCTTCCCGGATGCAGCTCCTCCAGCAACTCCAATAACAAA
 
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JMFS062A09+           GGGCTGTTTAAGCACATTTACACCCGTTGAAGTCGTTGGTTTCTCAA             
JMSF012J15+           TGGTTGTTTAGGAACATTTCCTCTCATTGAAGTTGTTGGTTGCTCAACCTCAGTAGCATT
JMFF033K23+           TGGTTGTTTAGGAACATTTCCTCTCATTGAAGTTGTTGGTTGCTCAACCTCAGTAGCATT
                      ____________________________________________________________
consensus             TGGTTGTTTAGGAACATTTCCTCTCATTGAAGTTGTTGGTTGCTCAACCTCAGTAGCATT
 
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JMSF012J15+           TGGCCCCTGCAAATGAAATCCAGAAAAATGAGCTCCTGATGAGGCCTCTATCATATCTTC
JMFF033K23+           TGGCCCCTGCAAATGAAATCCAGAAAAATGAGCTCCTGATGAGGC--CTATCATATCTTC
                      ____________________________________________________________
consensus             TGGCCCCTGCAAATGAAATCCAGAAAAATGAGCTCCTGATGAGGCCTCTATCATATCTTC
 
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JMSF012J15+           TACTGCTTTTGAACCCATGGTTTAGTTACGTACGGTATGGGAGATTGATTGCTGGAATCT
JMFF033K23+           TACTGCTTTTGAACCCATGGTTTAGTTACGTACGGTATGGGAGATTGATTGCTGGAATCT
                      ____________________________________________________________
consensus             TACTGCTTTTGAACCCATGGTTTAGTTACGTACGGTATGGGAGATTGATTGCTGGAATCT
 
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JMSF012J15+           TGACTGATATTTTAAGAAAGGTGCCGAG                                
JMFF033K23+           TGACTGATATTTTAAGAAAGGTGCCGAGGAGCTGAGCTACTGGAAAATTCACGAATTTAT
                      ____________________________________________________________
consensus             TGACTGATATTTTAAGAAAGGTGCCGAGGAGCTGAGCTACTGGAAAATTCACGAATTTAT