Contig 003217:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D24Sequence435003217 (4)ref|XP_009587220.1|112PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]805008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMFF033C22Sequence544003217 (4)ref|XP_009587220.1|151PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]757008263 (4)ref|XP_009587220.1|138PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]
JMSF037M12Sequence622003217 (4)ref|XP_009587220.1|176PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]682008263 (4)ref|XP_009793275.1|114PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMSF045D05Sequence781003217 (4)ref|XP_009587220.1|218PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]692008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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JMSF045D05+                               CAACATAGCTGGTTTGTGGTTCTCGAACAATCTCATAAAT
                      ____________________________________________________________
consensus                                 CAACATAGCTGGTTTGTGGTTCTCGAACAATCTCATAAAT
 
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JMSF045D05+           AGACACAACTTCCCCTGTTGAAGATATCTGGCCATGGCATGCAGCAGATTTAAGTTGATT
                      ____________________________________________________________
consensus             AGACACAACTTCCCCTGTTGAAGATATCTGGCCATGGCATGCAGCAGATTTAAGTTGATT
 
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JMSF045D05+           ATCACAATCAGCACTTGTGTCAGTTTTGGCATGTTCAGTCCTCAGAAGACTGCAGTCTGA
                      ____________________________________________________________
consensus             ATCACAATCAGCACTTGTGTCAGTTTTGGCATGTTCAGTCCTCAGAAGACTGCAGTCTGA
 
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JMSF045D05+           GCAAAACCAGTCACCCTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
JMSF037M12+                ACCAGTCACCTTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
                      ____________________________________________________________
consensus             GCAAAACCAGTCACCTTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
 
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JMSF045D05+           AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
JMSF037M12+           AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
JMFF033C22+                                                                   CATT
                      ____________________________________________________________
consensus             AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
 
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JMSF045D05+           GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
JMSF037M12+           GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
JMFF033C22+           GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
                      ____________________________________________________________
consensus             GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
 
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JMSF045D05+           AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMFF005D24+                      GAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMSF037M12+           AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMFF033C22+           AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
                      ____________________________________________________________
consensus             AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
 
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JMSF045D05+           AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMFF005D24+           AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMSF037M12+           AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMFF033C22+           AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
                      ____________________________________________________________
consensus             AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
 
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JMSF045D05+           CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
JMFF005D24+           CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
JMSF037M12+           CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTNGCAGCTGTCGATGCATCCTTGAAT
JMFF033C22+           CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
                      ____________________________________________________________
consensus             CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
 
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JMSF045D05+           TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMFF005D24+           TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMSF037M12+           TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMFF033C22+           TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
                      ____________________________________________________________
consensus             TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
 
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JMSF045D05+           GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMFF005D24+           GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMSF037M12+           GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMFF033C22+           GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
                      ____________________________________________________________
consensus             GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
 
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JMSF045D05+           CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMFF005D24+           CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMSF037M12+           CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMFF033C22+           CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
                      ____________________________________________________________
consensus             CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
 
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JMSF045D05+           GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMFF005D24+           GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMSF037M12+           GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMFF033C22+           GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
                      ____________________________________________________________
consensus             GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
 
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JMSF045D05+           AATCAAACCGGTGGCCACCC                                        
JMFF005D24+           AATCAAACCGGTGGCCACCC                                        
JMSF037M12+           AATCAAACCGGTGGCCACCC                                        
JMFF033C22+           AATCAAACCGGTGGCCACCCAGCTCCACTCTCCTCAGTCTCGCATGTACATAGAGATATC
                      ____________________________________________________________
consensus             AATCAAACCGGTGGCCACCCAGCTCCACTCTCCTCAGTCTCGCATGTACATAGAGATATC