| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF032O06 | Sequence | 542 | 003216 (9) | ref|XP_009798186.1| | 4e-49 | PREDICTED: tetraspanin-8-like [Nicotiana sylvestris] | 753 | 003216 (9) | ref|XP_011069841.1| | 4e-104 | PREDICTED: tetraspanin-8-like [Sesamum indicum] |
| JMFF036I09 | Sequence | 613 | 003216 (9) | ref|XP_009798186.1| | 2e-80 | PREDICTED: tetraspanin-8-like [Nicotiana sylvestris] | 308 | 003216 (9) | ref|XP_011069841.1| | 3e-15 | PREDICTED: tetraspanin-8-like [Sesamum indicum] |
| JMFN015A13 | Sequence | 519 | 003216 (9) | ref|XP_009595213.1| | 1e-39 | PREDICTED: tetraspanin-8-like [Nicotiana tomentosiformis] | |||||
| JMFN037O21 | Sequence | 541 | 003216 (9) | ref|XP_009595213.1| | 4e-88 | PREDICTED: tetraspanin-8-like [Nicotiana tomentosiformis] | |||||
| JMFS058A12 | Sequence | 627 | 003216 (9) | ref|XP_009798186.1| | 2e-89 | PREDICTED: tetraspanin-8-like [Nicotiana sylvestris] | |||||
| JMSF026P06 | Sequence | 438 | 003216 (9) | ref|XP_009798186.1| | 3e-32 | PREDICTED: tetraspanin-8-like [Nicotiana sylvestris] | 776 | 003216 (9) | ref|XP_011069841.1| | 1e-103 | PREDICTED: tetraspanin-8-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFN015A13+ AAAGCCAAGATAACAGATATCATATATGGGCAAAAGCAA
____________________________________________________________
consensus AAAGCCAAGATAACAGATATCATATATGGGCAAAAGCAA
. : . : . : . : . : . :
JMFN015A13+ ATTCAAGCAAACAACAATACTAAGACATGAAGTGATGATGCATTATTGTTCAATATGGCG
rJMFF032O06- TGATGATGCATTATTGTTCAATATGGCG
____________________________________________________________
consensus ATTCAAGCAAACAACAATACTAAGACATGAAGTGATGATGCATTATTGTTCAATATGGCG
. : . : . : . : . : . :
rJMFF036I09- GTACAATAGAGCATACTACATGACNGCAAGCTAAGAGTGCAACAA
JMFN015A13+ AAAACCGATAAGACTGTACAATAAAGCATACTACATGACAGCAAGCTAAGAGTGCAACAA
rJMFF032O06- AAAACCGATAAGACTGTACAATAAAGCATACTACATGACAGCAAGCTAAGAGTGCAACAA
rJMSF026P06- GTACAATAAAGCATACTACATGACAGCAAGCTAAGAGTGCAACAA
____________________________________________________________
consensus AAAACCGATAAGACTGTACAATAAAGCATACTACATGACAGCAAGCTAAGAGTGCAACAA
. : . : . : . : . : . :
rJMFF036I09- ANCAGTAGAGAAAAAGGCAGTCCAGAATCAAGCAATAGATCCANAACACTAATATCTACC
JMFN015A13+ ACCAGTAGAGAAAAAGGCAGTCCAAAATCAAGCAATAGATCCAAAACACTAATATCTACC
JMFN037O21+ AATATCTACC
rJMFF032O06- ACCAGTAGAGAAAAAGGCAGTCCAAAATCAAGCAATAGATCCAAAACACTAATATCTACC
rJMSF026P06- ACCAGTAGAGAAAAAGGCAGTCCAAAATCAAGCAATAGATCCAAAACACTAATATCTACC
____________________________________________________________
consensus ACCAGTAGAGAAAAAGGCAGTCCAAAATCAAGCAATAGATCCAAAACACTAATATCTACC
. : . : . : . : . : . :
rJMFF036I09- CGGCCTGATCAAACTANAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTACCCTCCCT
JMFN015A13+ CGGCCTGATCAAACTAGAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTATCCTCCCT
JMFN037O21+ CGGCCTGATCAAACTAGAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTATCCTCCCT
rJMFF032O06- CGGCCTGATCAAACTAGAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTATCCTCCCT
rJMSF026P06- CGGCCTGATCAAACTAGAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTATCCTCCCT
____________________________________________________________
consensus CGGCCTGATCAAACTAGAGCGAAGGATTCAAGGATAACGCTTCCAAGAGTTATCCTCCCT
. : . : . : . : . : . :
rJMFF036I09- GTTGTTTCNGANAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAANAT
JMFN015A13+ GTTGTTTCTGAAAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAAGAT
JMFN037O21+ GTTGTTTCTGAAAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAAGAT
rJMFF032O06- GTTGTTTCTGAAAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAAGAT
rJMSF026P06- GTTGTTTCTGAAAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAAGAT
____________________________________________________________
consensus GTTGTTTCTGAAAGCACAACACCCCACCGAGTATACGATAATAAGGAAGATGAGGAAGAT
. : . : . : . : . : . :
rJMFF036I09- GATGTTNATGATCGCNACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
JMFN015A13+ GATGTTGATGATCGCGACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
JMFN037O21+ GATGTTGATGATCGCGACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
rJMFF032O06- GATGTTGATGATCGCGACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
rJMSF026P06- GATGTTGATGATCGCGACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
____________________________________________________________
consensus GATGTTGATGATCGCGACTTTCTTCCAGTCCGTCTTGATGTTATCAAGCAGCCCCGCTTT
. : . : . : . : . : . :
rJMFF036I09- GCACGATTGGCAG
JMFN015A13+ GCACGATTGGCAGCTGTAGCATAACGTCTTCGGGTCATTGCTCCAAGTAACACAATCTTG
JMFN037O21+ GCACGATTGGCAGCTGTAGCATAACGTCTTCGGGTCATTGCTCCAAGTAACACAATCTTG
rJMFF032O06- GCACGATTGGCAGCTGTAGCATAACGTCTTCGGGTCATTGCTCCAAGTAACACAATCTTG
rJMSF026P06- GCACGATTGGCAGCTGTAGCATAACGTCTTCGGGTCATTGCTCCAAGTAACACAATCTTG
____________________________________________________________
consensus GCACGATTGGCAGCTGTAGCATAACGTCTTCGGGTCATTGCTCCAAGTAACACAATCTTG
. : . : . : . : . : . :
JMFN015A13+ ATTGGTCAAGGACGAGGTCGGGGTCTTGGTCCAGTTCGTTGGGCTCACATACTCGAAGTT
JMFN037O21+ ATTGGTCAAGGACGAGGTCGGGGTCTTGGTCCAGTTCGTTGGGCTCACATACTCGAAGTT
rJMFF032O06- ATTGGTCAAGGACGAGGTCGGGGTCTTGGTCCAGTTCGTTGGGCTCACATACTCGAAGTT
rJMSF026P06- ATTGGTCAAGGACGAGGTCGGGGTCTTGGTCCAGTTCGTTGGGCTCACATACTCGAAGTT
____________________________________________________________
consensus ATTGGTCAAGGACGAGGTCGGGGTCTTGGTCCAGTTCGTTGGGCTCACATACTCGAAGTT
. : . : . : . : . : . :
JMFN037O21+ GCAGTCATTCGATGGCTTGCAGCATCCCGACTGAAGGGCAGAAAGGTGTCCTTTGTAGAA
rJMFF032O06- GCAGTCATTCGATGGCTTGCAGCATCCCGACTGAAGGGCAGAAAGGTGTCCTTTGTAGAA
rJMSF026P06- GCAGTCATTCGATGGCTTGCAGCATCCCGACTGAAGGGCAGAAAGGTGTCCTTTGTAGAA
JMFS058A12+ TCATTCGATGGCTTGCAGCATCCCGACTGAAGGGCAGAAAGGTGTCCTTTGTAGAA
JMFF036I09+ CAGAAAGGTGTCCTTTGTAGAA
____________________________________________________________
consensus GCAGTCATTCGATGGCTTGCAGCATCCCGACTGAAGGGCAGAAAGGTGTCCTTTGTAGAA
. : . : . : . : . : . :
JMFN037O21+ ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
rJMFF032O06- ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
rJMSF026P06- ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
JMFS058A12+ ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
JMFF036I09+ ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
JMFF032O06+ TG
____________________________________________________________
consensus ATCATTAGCAGCAGTGTTGGAGCCATCATCAATGAGCTTCTGGCAGATCTTACTATCCTG
. : . : . : . : . : . :
JMFN037O21+ AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
rJMFF032O06- AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
rJMSF026P06- AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
JMFS058A12+ AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
JMFF036I09+ AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
JMFF032O06+ AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
____________________________________________________________
consensus AAGGCAGCTCCCAATTCTACCCCAGTTATTATTAACCCTTTTCTGCAGCCAATGAGAGTA
. : . : . : . : . : . :
JMFN037O21+ ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGC
rJMFF032O06- ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
rJMSF026P06- ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
JMFS058A12+ ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
JMFF036I09+ ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
JMSF026P06+ CAGGGCCTCCCNTGCCCCNTTNTT
JMFF032O06+ ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
____________________________________________________________
consensus ATCCCCAAGCCTATACTCCTTATACCCTCTCCCAGACAGGGCCTCCCCTGCCCCCTTATT
. : . : . : . : . : . :
rJMFF032O06- AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCAAGAACATCAC
rJMSF026P06- AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCANGAACATCAC
JMFS058A12+ AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCAAGAACATCAC
JMFF036I09+ AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCAAGAACATCAC
JMSF026P06+ NGTCNCCACAAAAGCAAAAATGGTGAAGNTGAAGAGAAGCACAATGAGCAAGAACATCAC
JMFF032O06+ AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCAAGAACATCAC
____________________________________________________________
consensus AGTCACCACAAAAGCAAAAATGGTGAAGCTGAAGAGAAGCACAATGAGCAAGAACATCAC
. : . : . : . : . : . :
rJMFF032O06- CAGAA
rJMSF026P06- CAG-AAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCNTATGAGGCCGGC
JMFS058A12+ CAG-AAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCCTATGAGGCCGGCGA
JMFF036I09+ CAG-AAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCCTATGAGGCCGGCGA
JMSF026P06+ CAG-AAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCCTATGAGGCCGGCGA
JMFF032O06+ CAGAAAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCCTATGAGGCCGGCGA
____________________________________________________________
consensus CAG-AAGATAGACCCAGAGAAGCCAGGTGACTCTGCAGCACGAGCCTATGAGGCCGGCGA
. : . : . : . : . : . :
JMFS058A12+ GTGAAACCACCATGACGAACACCCCCAG-AGCTATCACCGGCTTCTCCAGGAACTGCTCG
JMFF036I09+ GTGAAACCACCATGACGAACACCCCCAG-AGCTATCACCGGCTTCTCCAGGAACTGCTCG
JMSF026P06+ GTGAAACCACCATGACGAACACCCCCAG-AGCTATCACCGGCTTCTCCAGGAACTGCTCG
JMFF032O06+ GTGAAACCACCATGACGAACACCCCCAGAAGCTATCACCGGCTTCTCCAGGAACTGCTCG
____________________________________________________________
consensus GTGAAACCACCATGACGAACACCCCCAG-AGCTATCACCGGCTTCTCCAGGAACTGCTCG
. : . : . : . : . : . :
JMFS058A12+ CACTCCGTGTTGGCCTGCCGGGACAGCCATATCCCGCCGGCGAGGATTGGGATTGAGATC
JMFF036I09+ CACTCCGTGTTGGCCTGCCGGGACAGCCATATCCCGCCGGCGAGGATTGGGATTGAGATC
JMSF026P06+ CACTCCGTGTTGGCCTGCCGGGACAGCCATATCCCGCCGGCGAGGATTGGGATTGAGATC
JMFF032O06+ CACTCCGTGTTGGCCTGCCGGGACAGCCATATCCCGCCGGCGAGGATTGGGATTGAGATC
____________________________________________________________
consensus CACTCCGTGTTGGCCTGCCGGGACAGCCATATCCCGCCGGCGAGGATTGGGATTGAGATC
. : . : . : . : . : . :
JMFS058A12+ AAGAACGTGGCGATGTTGAGAAGACCCAGGAGGTTGTTGCTCACTTTCACCATTTTTGGA
JMFF036I09+ AAGAACGTGGCGATGTTGAGAAGACCCAGGAGGTTGTTGCTCACTTTCACCATTTTTGGA
JMSF026P06+ AAGAACGTGGCGATGTTGAGAAGACCCAGGAGGTTGTTGCTCACTTTCACCATTTTTGGA
JMFF032O06+ AAGAACGTGGCGATGTTGAGAAGACCCAGGAGGTTGTTGCTCACTTTCACCATTTTTGGA
____________________________________________________________
consensus AAGAACGTGGCGATGTTGAGAAGACCCAGGAGGTTGTTGCTCACTTTCACCATTTTTGGA
. : . : . : . : . : . :
JMFS058A12+ AGCGAACCCAGTAAAGAAAACACGATTTCTCGAGTGGGAAATTGGAGAAACTAACAGAGA
JMFF036I09+ AGCGAACCCAGTAAAGAAAACACGATTGCTCGAGTGGGAAATTGGAGAAACTAACAGAGA
JMSF026P06+ AGCGAACCCAGTAAAGAAAACACGATTTCTCGAGTGGGAAATTGGAGAAACTAACAGAGA
JMFF032O06+ AGCGAACCCAGTAAAGAAAACACGATTTCTCGAGTGGGAAATTGGAGAAACTAACAGAGA
____________________________________________________________
consensus AGCGAACCCAGTAAAGAAAACACGATTTCTCGAGTGGGAAATTGGAGAAACTAACAGAGA
. : . : . : . : . : . :
JMFS058A12+ ATTCAATCAAAATAAAAAATTTTCAGAAATGTT
JMFF036I09+ ATTCAATCAAAATAAAAAATTTTCAGAAATGTTGAGAAAAAGATGAGGCTTTT
JMSF026P06+ ATTCAATCAAAATAAAAAATTTTCAGAAATGTTGAGAAAAAGATGAGGCTTTT
JMFF032O06+ ATTCAATCAAAATAAAAAATTTTCAGAAATGTTGAGAAAAAGATGAGGCTTTTTTGATGA
____________________________________________________________
consensus ATTCAATCAAAATAAAAAATTTTCAGAAATGTTGAGAAAAAGATGAGGCTTTTTTGATGA