Contig 003213:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS056A12+                                                             TGGGGGCGAC
                      ____________________________________________________________
consensus                                                               TGGGGGCGAC
 
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JMFS056A12+           GATGGGGACGTGGGTGGTGTACATTGCTCCGGCCACGTTCGGGATGCCGGAGAAGGCTTC
                      ____________________________________________________________
consensus             GATGGGGACGTGGGTGGTGTACATTGCTCCGGCCACGTTCGGGATGCCGGAGAAGGCTTC
 
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JMFS056A12+           GAATTCGCGTTTGATATTGGTCATGTGTTGGGGTTCCGGCCATTGGAGGAATTTGGGCAT
                      ____________________________________________________________
consensus             GAATTCGCGTTTGATATTGGTCATGTGTTGGGGTTCCGGCCATTGGAGGAATTTGGGCAT
 
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JMFS056A12+           GAGAACCGTTCGGATTGCGGCGGAGACTTCAAGAACCAGCTTGTGGCAGGTGGAGATGCC
                      ____________________________________________________________
consensus             GAGAACCGTTCGGATTGCGGCGGAGACTTCAAGAACCAGCTTGTGGCAGGTGGAGATGCC
 
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JMFS056A12+           TAACCCGAAACGCTTGGAGACCTCCCGGAGCGGCTCTCCGGTGGCGAGCCGCCAAACGCA
                      ____________________________________________________________
consensus             TAACCCGAAACGCTTGGAGACCTCCCGGAGCGGCTCTCCGGTGGCGAGCCGCCAAACGCA
 
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JMFS056A12+           GACGGCGACCCGCTGGCGAACCGGGATGGCCAGGCGGAGAGTGGTGTCCTTCTTCGTCAC
                      ____________________________________________________________
consensus             GACGGCGACCCGCTGGCGAACCGGGATGGCCAGGCGGAGAGTGGTGTCCTTCTTCGTCAC
 
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JMFS056A12+           CACCGATTCCAATTCCTCGCAGATCAAATCAAACGTCGCTCTGCTCATCCTAAACGCCTT
JMFF028H14+                         CCTCGCAGATCATATCGAACGTCGCTTTGCTCATCCTAAACGCCTT
JMFF032J22+                         CCTCGCAGATCATATCGAACGTCGCTTTGCTCATCCTAAACGCCTT
                      ____________________________________________________________
consensus             CACCGATTCCAATTCCTCGCAGATCATATCGAACGTCGCTTTGCTCATCCTAAACGCCTT
 
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JMFS056A12+           CTTGAACTCTTCCTCGGGAAAATCAGGACTATTGCATTGCTCCCACCATGCATTCGACCG
JMFF028H14+           CTTAAACTCCTCCTCCGGAAAATCCGGGCCGTTACACTGCTCCCACCACGCATTCGACCG
JMFF032J22+           CTTAAACTCCTCCTCCGGAAAATCCGGGCCGTTACACTGCTCCCACCACGCATTCGACCG
                      ____________________________________________________________
consensus             CTTAAACTCCTCCTCCGGAAAATCCGGGCCGTTACACTGCTCCCACCACGCATTCGACCG
 
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JMFS056A12+           GTCCTTCACCCATAACC                                           
JMFF028H14+           GTTCTTCACCCACAACCGCCGCTGATGCTGCCCCCCTCCCCCACCGGCATCCGACGTGCT
JMFF032J22+           GTTCTTCACCCACAACCGCCGCTGATGCTGCCCCCCTCCCCCACCGGCATCCGACGTGCT
                      ____________________________________________________________
consensus             GTTCTTCACCCACAACCGCCGCTGATGCTGCCCCCCTCCCCCACCGGCATCCGACGTGCT
 
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JMFF028H14+           AACAACATCCACAGACTCCGCACGACTGCGCTTCCCATTCCCCTTCATCTCCTCCACCTC
JMFF032J22+           AACAACATCCACAGACTCCGCACGACCGCGCTTCCCATTCCCCTTCATCTCCTCCACCTC
                      ____________________________________________________________
consensus             AACAACATCCACAGACTCCGCACGACTGCGCTTCCCATTCCCCTTCATCTCCTCCACCTC
 
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JMFF028H14+           CGCCGCCGTCACCGCCGCCGTCCTCGGCGGCTCCCTATCCGCCGGAAGAAACTTGTTCAG
JMFF032J22+           CGCCGCCGTCACCGCCGCCGTCCTCGGCGGCTCCCTATCCGCCGGAAGAAACTTGTTCAG
                      ____________________________________________________________
consensus             CGCCGCCGTCACCGCCGCCGTCCTCGGCGGCTCCCTATCCGCCGGAAGAAACTTGTTCAG
 
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JMFF028H14+           AATCTCCTCCACCGACGAATCGGAATGATCATAGTAAGAATCATTATCCATTCTCTGCTT
JMFF032J22+           AATCTCCTCCACCGACGAATCGGAATGATCATAGTAAGAATCATTATCCATTCTCTGCTT
                      ____________________________________________________________
consensus             AATCTCCTCCACCGACGAATCGGAATGATCATAGTAAGAATCATTATCCATTCTCTGCTT
 
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JMFF028H14+           CTTAACCGCCGGCTGGGGAGCAAAGTCGAAATCCTGGAAGAAGCTCAACAGATTCGGCCA
JMFF032J22+           CTTAACCGCCGGCTGGGGAGCAAAGTCGAAATCCTGGAAGAAGCTCAACAGATTCGGCCA
                      ____________________________________________________________
consensus             CTTAACCGCCGGCTGGGGAGCAAAGTCGAAATCCTGGAAGAAGCTCAACAGATTCGGCCA
 
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JMFF028H14+           GGAAGCGTCGTCTGAACAGGGAAACGAAATCGAAGAAATTTCCATTAAATCGTAATCGGA
JMFF032J22+           GGAAGCGTCGTCTGAACAGGGAAACGAAATCGAAGAAATTTCCATTAAATCGTAATCGGA
                      ____________________________________________________________
consensus             GGAAGCGTCGTCTGAACAGGGAAACGAAATCGAAGAAATTTCCATTAAATCGTAATCGGA
 
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JMFF028H14+           GATATAATCTACTCAGAAAATGGAACGAATTGAAAACGCATGTGAACACAGAAGAACT  
JMFF032J22+           GATATAATCTACTCAGAAAATGGAACGAATTGAAAACGCATGTGAACACAGAAGAACTCT
                      ____________________________________________________________
consensus             GATATAATCTACTCAGAAAATGGAACGAATTGAAAACGCATGTGAACACAGAAGAACTCT