| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021G02 | Sequence | 506 | 003209 (4) | ref|XP_011088213.1| | 9e-28 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se | 229 | 012345 (5) | |||
| JMFF023E14 | Sequence | 472 | 003209 (4) | ref|XP_011088213.1| | 8e-36 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se | 718 | 012345 (5) | ref|XP_009628102.1| | 5e-67 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Ni |
| JMFF031O17 | Sequence | 536 | 003209 (4) | ref|XP_011088213.1| | 4e-34 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Se | 847 | 012345 (5) | ref|XP_009628102.1| | 1e-41 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Ni |
| JMSF028O14 | Sequence | 616 | 003209 (4) | ref|XP_006345367.1| | 4e-60 | PREDICTED: probable receptor-like protein kinase At5g18500-like [Solanum tubero | 779 | 012345 (5) | ref|XP_009628102.1| | 5e-82 | PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Ni |
This contig is upended
. : . : . : . : . : . :
JMSF028O14+ CATTGGGTTCACTTTGGAAAGCCACTTTCCCATTATTAACAGCAAGAACTGAGATG
____________________________________________________________
consensus CATTGGGTTCACTTTGGAAAGCCACTTTCCCATTATTAACAGCAAGAACTGAGATG
. : . : . : . : . : . :
JMSF028O14+ CTCTTGTCAACATTCCTGGCACAGTACTTTGCAACTGACACCGGTGATCGGACGGCGTGG
____________________________________________________________
consensus CTCTTGTCAACATTCCTGGCACAGTACTTTGCAACTGACACCGGTGATCGGACGGCGTGG
. : . : . : . : . : . :
JMSF028O14+ CGGCTGCCGGAAGTGCCCACTATCAGATCCGTAGCTCTGTAAGTCTTTGCCTCCCGGGCA
JMFF023E14+ CCCGGGCA
____________________________________________________________
consensus CGGCTGCCGGAAGTGCCCACTATCAGATCCGTAGCTCTGTAAGTCTTTGCCTCCCGGGCA
. : . : . : . : . : . :
JMSF028O14+ AGAATTTTCCGGGCCGGAGACCCTCTGCACACCCGGAGCTTCAGATCAACCTGCTTCAAG
JMFF023E14+ AGAATTTTCCGGGCCGGAGACCCTCTGCACACCCGGAGCTTCAGATCAACCTGCTTCAAG
JMFF021G02+ GGAGCTTCAGATCAACCTGCTTCAAG
JMFF031O17+ TTTTCCGGGCCGGAGACCCTCTGCACACCCGGAGCTTCAGATCAACCTGCTTCAAG
____________________________________________________________
consensus AGAATTTTCCGGGCCGGAGACCCTCTGCACACCCGGAGCTTCAGATCAACCTGCTTCAAG
. : . : . : . : . : . :
JMSF028O14+ TTGCAGAAGCCTTCATAAGCAGCCAGAACGGAATCAAATGTCTTCACCAGTCTTAGCATC
JMFF023E14+ TTGCAGAAGCCTTCATAAGCAGCCAGAACGGAATCAAATGTCTTCACCAGTCTTAGCATC
JMFF021G02+ TTGCAGAAGCCTTCATAAGCAGCCAGAACGGAATCAAATGTCTTCACCAGTCTTAGCATC
JMFF031O17+ TTGCAGAAGCCTTCATAAGCAGCCAGAACGGAATCAAATGTCTTCACCAGTCTTAGCATC
____________________________________________________________
consensus TTGCAGAAGCCTTCATAAGCAGCCAGAACGGAATCAAATGTCTTCACCAGTCTTAGCATC
. : . : . : . : . : . :
JMSF028O14+ TCCGATTTATCGGTGTCGGGATCAAGAACGTGGAGAGCAATGATGCGATCTCCGGTCTGG
JMFF023E14+ TCCGATTTATCGGTGTCGGGATCAAGAACGTGGAGAGCAATGATGCGATCTCCGGTTTGG
JMFF021G02+ TCCGATTTATCGGTGTCGGGATCAAGAACGTGGAGAGCAATGATGCGATCTCCGGTCTGG
JMFF031O17+ TCCGATTTATCGGTGTCGGGATCAAGAACGTGGAGAGCAATGATGCGATCTCCGGTCTGG
____________________________________________________________
consensus TCCGATTTATCGGTGTCGGGATCAAGAACGTGGAGAGCAATGATGCGATCTCCGGTCTGG
. : . : . : . : . : . :
JMSF028O14+ GCTACCTTAACCAACGCCCAAGTCAGAAGCTCTTTGCTCCGAGAATCCATTTTCACTCCC
JMFF023E14+ GCTACCTTAACCAACGCCCAAGTCAGAAGCTCTTTGCTCCGAGAATCCATTTTCACTCCC
JMFF021G02+ GCTACCTTAACCAACGCCCAAGTCAGAAGCTCTTTGCTCCGAGAATCCATTTTCACTCCC
JMFF031O17+ GCTACCTTAACCAACGCCCAAGTCAGAAGCTCTTTGCTCCGAGAATCCATTTTCACTCCC
____________________________________________________________
consensus GCTACCTTAACCAACGCCCAAGTCAGAAGCTCTTTGCTCCGAGAATCCATTTTCACTCCC
. : . : . : . : . : . :
JMSF028O14+ ACCACCACCACCGCCCCGCCATTGCTACCACTGTTAGCAGTACATTCCGCGGCGGCACAG
JMFF023E14+ ACCACCACCACCGCCCCGCCATTGCTACCACTGTTAGCAGTACATTCCGCGGCGGCACAG
JMFF021G02+ ACCACCACCACCGCCCCGCCATTGCTACCACTGTTAGCAGTACATTCCGCGGCGGCACAG
JMFF031O17+ ACCACCACCACCGCCCCGCCATTGCTACCACTGTTAGCAGTACATTCCGCGGCGGCACAG
____________________________________________________________
consensus ACCACCACCACCGCCCCGCCATTGCTACCACTGTTAGCAGTACATTCCGCGGCGGCACAG
. : . : . : . : . : . :
JMSF028O14+ TTTCCGGTGAGCTTCATCGTCGGTGGTGCAACGGCGTCGTTTTCCTTTCTTCTAGGTTTC
JMFF023E14+ TTTCCGGTGAGCTTCATCGTCGGTGGTGCAACGGCGTCGTTTTCCTTTCTTCTAGGTTTC
JMFF021G02+ TTTCCGGTGAGCTTCATCGTCGGTGGTGCAACGGCGTCGTTTTCCTTTCTTCTAGGTTTC
JMFF031O17+ TTTCCGGTGAGCTTCATCGTCGGTGGTGCAACGGCGTCGTTTTCCTTTCTTCTAGGTTTC
____________________________________________________________
consensus TTTCCGGTGAGCTTCATCGTCGGTGGTGCAACGGCGTCGTTTTCCTTTCTTCTAGGTTTC
. : . : . : . : . : . :
JMSF028O14+ TAGGCCACCCACCCCCTTCTCTCTCTCTCTCTCTCCTCTGTCTGGGAGAAGAGAAGAAGA
JMFF023E14+ TAGGCCACCCACCCCCTTCTCTCTCTCTCTCTCTCCTCTGTCTGGGAGAAGAGAAGAAGA
JMFF021G02+ TAGGCCACCCACCCCCTTCTCTCTCTCTCTCTCTCCTCTGTCTGGGAGAAGAGAAGAAGA
JMFF031O17+ TAGGCCACCCACCCCCTTCTCTCTCTCTCTCTCTCCTCTGTCTGGGAGAAGAGAAGAAGA
____________________________________________________________
consensus TAGGCCACCCACCCCCTTCTCTCTCTCTCTCTCTCCTCTGTCTGGGAGAAGAGAAGAAGA
. : . : . : . : . : . :
JMSF028O14+ AGAAAGAGACTTTTGCTT
JMFF023E14+ AGAAAGAGACTTTTGCTTTGTTTGTTCTCTCCTTCTCTCTCTAT
JMFF021G02+ AGAAAGAGACTTTTGCTTTGTTTGTTCTCTCCTTCTCTCTCTATCTCTCTCTAAAAGGGC
JMFF031O17+ AGAAAGAGACTTTTGCTTTGTTTGTTCTCTCCTTCTCTCTCTATCTCTCTCTAAAAGGGC
____________________________________________________________
consensus AGAAAGAGACTTTTGCTTTGTTTGTTCTCTCCTTCTCTCTCTATCTCTCTCTAAAAGGGC
. : . : . : . : . : . :
JMFF021G02+ AAAAGTGCAGTCATGAGTAGATTCTGGGTTGTGTCGCTCGCGGGAAAGTGAAAAACAAAC
JMFF031O17+ AAAAGTGCAGTCATGAGTAGATTCTGGGTTGTGTCGCTCGCGGGAAAGTGAAAAACAAAC
____________________________________________________________
consensus AAAAGTGCAGTCATGAGTAGATTCTGGGTTGTGTCGCTCGCGGGAAAGTGAAAAACAAAC