| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006B02 | Sequence | 498 | 003208 (7) | ref|XP_009612875.1| | 2e-45 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | |||||
| JMFF018E15 | Sequence | 522 | 003208 (7) | ref|XP_009612875.1| | 3e-50 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 763 | 005397 (3) | ref|XP_009608295.1| | 2e-109 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
| JMFF026O14 | Sequence | 521 | 003208 (7) | ref|XP_009612875.1| | 1e-50 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 768 | 005397 (3) | ref|XP_009608295.1| | 3e-110 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
| JMFF031H04 | Sequence | 603 | 003208 (7) | ref|XP_009612875.1| | 2e-51 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 716 | 005397 (3) | ref|XP_009608295.1| | 1e-103 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
| JMFF031M19 | Sequence | 459 | 003208 (7) | gb|KDP29088.1| | 1e-38 | hypothetical protein JCGZ_16477 [Jatropha curcas] | |||||
| JMFF043P11 | Sequence | 631 | 003208 (7) | ref|XP_009612875.1| | 7e-54 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 651 | 006943 (12) | ref|XP_009794756.1| | 1e-18 | PREDICTED: ethylene-responsive transcription factor RAP2-12-like [Nicotiana syl |
| JMFF046H23 | Sequence | 568 | 003208 (7) | ref|XP_002279724.1| | 9e-44 | PREDICTED: importin subunit alpha-2 [Vitis vinifera] emb|CBI32701.3| unnamed pro | |||||
This contig is upended
. : . : . : . : . : . :
JMFF043P11+ CCAAGCCGCTTCAAGCAACTGTTCATCTGGA
JMFF031H04+ GGA
____________________________________________________________
consensus CCAAGCCGCTTCAAGCAACTGTTCATCTGGA
. : . : . : . : . : . :
JMFF046H23+ GCAGAGCTCCAGCCTCGAGGGCAGCTTCA
JMFF043P11+ GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCCTCGAGGGCAGCTTCA
JMFF031H04+ GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCNTCGAGGGCAGCTTCA
____________________________________________________________
consensus GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCCTCGAGGGCAGCTTCA
. : . : . : . : . : . :
JMFF018E15+ CTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF046H23+ ACAGGA-GGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF043P11+ ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTN
JMFF026O14+ TAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF031H04+ ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF006B02+ CGGAGAGCATTCACTCTT
____________________________________________________________
consensus ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
. : . : . : . : . : . :
JMFF018E15+ TCCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF046H23+ TCCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF043P11+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF026O14+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF031H04+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF006B02+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF031M19+ TGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
____________________________________________________________
consensus TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
. : . : . : . : . : . :
JMFF018E15+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF046H23+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF043P11+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF026O14+ GAAGTCTGAAACTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF031H04+ GAAGTCTGAAACTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF006B02+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF031M19+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
____________________________________________________________
consensus GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
. : . : . : . : . : . :
JMFF018E15+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF046H23+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF043P11+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF026O14+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF031H04+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF006B02+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF031M19+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
____________________________________________________________
consensus ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
. : . : . : . : . : . :
JMFF018E15+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF046H23+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF043P11+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF026O14+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF031H04+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF006B02+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF031M19+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
____________________________________________________________
consensus CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
. : . : . : . : . : . :
JMFF018E15+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF046H23+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF043P11+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF026O14+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF031H04+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF006B02+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF031M19+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
____________________________________________________________
consensus ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
. : . : . : . : . : . :
JMFF018E15+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF046H23+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF043P11+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF026O14+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF031H04+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF006B02+ GAAGTAAGCTCCAAGANTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF031M19+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
____________________________________________________________
consensus GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
. : . : . : . : . : . :
JMFF018E15+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF046H23+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF043P11+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF026O14+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF031H04+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF006B02+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF031M19+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
____________________________________________________________
consensus TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
. : . : . : . : . : . :
JMFF018E15+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF046H23+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF043P11+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF026O14+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF031H04+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF006B02+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF031M19+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
____________________________________________________________
consensus ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT