Contig 003205:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017D11Sequence531003205 (4)gb|KDP30269.1|3e-63hypothetical protein JCGZ_17051 [Jatropha curcas]
JMFF031I10Sequence567003205 (4)ref|XP_009600865.1|197PREDICTED: uncharacterized protein LOC104096230 [Nicotiana tomentosiformis]669004055 (2)ref|XP_009765496.1|122PREDICTED: uncharacterized protein LOC104217040 [Nicotiana sylvestris]
JMFF031K02Sequence567003205 (4)gb|KDP30269.1|3e-55hypothetical protein JCGZ_17051 [Jatropha curcas]141004055 (2)
JMFF038K19Sequence531003205 (4)gb|KDP30269.1|3e-63hypothetical protein JCGZ_17051 [Jatropha curcas]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+                                            GGGTTTTTCAGCAACACAGCCCAGGTT
JMFF017D11+                                          GTGGGTTTTTCAGCAACACAGCCCAGGTT
JMFF031K02+                                            GGGTTTTTCAGCAACACAGCCCAGGTT
JMFF031I10+                                            GGGTTTTTCAGCAACACAGCCCAGGTT
                      ____________________________________________________________
consensus                                            GTGGGTTTTTCAGCAACACAGCCCAGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           AAGAGCAGCTTCAACGCAAGGAGGCAAATGCTGCCCAGTCTCTGAGCTTTCATCACTCCG
JMFF017D11+           AAGAGCAGCTTCAACGCAAGGAGGCAAATGCTGCCCAGTCTCTGAGCTTTCATCACTCCG
JMFF031K02+           AAGAGCAGCTTCANCGCAAGGAGGCAAATGCTGCCCAGTCTCTGAGCTTTCATCACTCCG
JMFF031I10+           AAGAGCAGCTTCAACGCAAGGAGGCAAATGCTGCCCAGTCTCTGAGCTTTCATCACTCCG
                      ____________________________________________________________
consensus             AAGAGCAGCTTCAACGCAAGGAGGCAAATGCTGCCCAGTCTCTGAGCTTTCATCACTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           AATTATTGTACTAATGGCATCATTAACCCTATCCCAGAGTGTGTCAGGATCAGCATACTC
JMFF017D11+           AATTATTGTACTAATGGCATCATTAACCCTATCCCAGAGTGTGTCAGGATCAGCATACTC
JMFF031K02+           AATTATTGTACTAATGGCATCATTAACCCTATCCCAGAGTGTGTCAGGATCAGCATACTC
JMFF031I10+           AATTATTGTACTAATGGCATCATTAACCCTATCCCAGAGTGTGTCAGGATCAGCATACTC
                      ____________________________________________________________
consensus             AATTATTGTACTAATGGCATCATTAACCCTATCCCAGAGTGTGTCAGGATCAGCATACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           CGCCTCAGAATTGGCTTTGGAGTACATAATTTCCTCCGCCCTCAACACCACAATTGGAAG
JMFF017D11+           CGCCTCAGAATTGGCTTTGGAGTACATAATTTCCTCCGCCCTCAACACCACAATTGGAAG
JMFF031K02+           CGCCTCAGAATTGGCTTTGGAGTACATAATTTCCTCCGCCCTCAACACCACAATTGGAAG
JMFF031I10+           CGCCTCAGAATTGGCTTTGGAGTACATAATTTCCTCCGCCCTCAACACCACAATTGGAAG
                      ____________________________________________________________
consensus             CGCCTCAGAATTGGCTTTGGAGTACATAATTTCCTCCGCCCTCAACACCACAATTGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           CTTCACCTGCCATTCCCTGTTCTTCTTAGTAGCAGTGCTGTGCCTCTCATACACAAATCT
JMFF017D11+           CTTCACCTGCCATTCCCTGTTCTTCTTAGTAGCAGTGCTGTGCCTCTCATACACAAATCT
JMFF031K02+           CTTCACCTGCCATTCCCTGTTCTTCTTAGTAGCAGTGCTGTGCCTCTCATACACAAATCT
JMFF031I10+           CTTCACCTGCCATTCCCTGTTCTTCTTAGTAGCAGTGCTGTGCCTCTCATACACAAATCT
                      ____________________________________________________________
consensus             CTTCACCTGCCATTCCCTGTTCTTCTTAGTAGCAGTGCTGTGCCTCTCATACACAAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           CAAAATCCGATGAATGATCGAGCCTCTGATGGGCTTGTGAATATCGCTATGCCACGCCCT
JMFF017D11+           CAAAATCCGATGAATGATCGAGCCTCTGATGGGCTTGTGAATATCGCTATGCCACGCCCT
JMFF031K02+           CAAAATCCGATGAATGATCGAGCCTNTGATGGGCTTGTGAATATCGCTATGCCACGCCCT
JMFF031I10+           CAAAATCCGATGAATGATCGAGCCTCTGATGGGCTTGTGAATATCGCTATGCCACGCCCT
                      ____________________________________________________________
consensus             CAAAATCCGATGAATGATCGAGCCTCTGATGGGCTTGTGAATATCGCTATGCCACGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           CCTCACACACTCGTAAGGTCTAGGTCCAGGCCGAGTCATCTTCTTCTTTCTCAGCTCCCA
JMFF017D11+           CCTCACACACTCGTAAGGTCTAGGTCCAGGCCGAGTCATCTTCTTCTTTCTCAGCTCCCA
JMFF031K02+           CCTCACACACTCGTAAGGTNTAGGTCCAGGCCGAGGCATCTTCTTCTTTCTCAGCTCCCA
JMFF031I10+           CCTCACACACTCGTAAGGTCTAGGTCCAGGCCGAGGCATCTTCTTCTTTCTCAGCTCCCA
                      ____________________________________________________________
consensus             CCTCACACACTCGTAAGGTCTAGGTCCAGGCCGAGTCATCTTCTTCTTTCTCAGCTCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           AACACAGTGCGGTGAAGCAGAACAAAGAGGAGAGGAGAGAATGAATTTACATTAGAAATG
JMFF017D11+           AACACAGTGCGGTGAAGCAGAACAAAGAGGAGAGGAGAGAATGAATTTACATTAGAAATG
JMFF031K02+           AACACAGTGCGGTGAAGCAGAACAAAGAGGAGAGGAGAGAATGAATTTACATTAGAAATG
JMFF031I10+           AACACAGTGCGGTGAAGCAGAACAAAGAGGAGAGGAGAGAATGAATTTACATTAGAAATG
                      ____________________________________________________________
consensus             AACACAGTGCGGTGAAGCAGAACAAAGAGGAGAGGAGAGAATGAATTTACATTAGAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           ATGGAGAGATGACGGGCGGAGGAGAAATGTGGTGCTTTATGAAGAAAGCAATCTCTCTCT
JMFF017D11+           ATGGAGAGATGACGGGCGGAGGAGAAATGTGGTGCTTTATGAAGAAAGCAATCTCTCTCT
JMFF031K02+           ATGGAGAGATGNCGGGCGGAGGAGAAATGTGGTGCTTTATGAAGAAAGCAATCTCTCTCT
JMFF031I10+           ATGGAGAGATGACGGGCGGAGGAGAAATGTGGTGCTTTATGAAGAAAGCAATCTCTCTCT
                      ____________________________________________________________
consensus             ATGGAGAGATGACGGGCGGAGGAGAAATGTGGTGCTTTATGAAGAAAGCAATCTCTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF038K19+           CTCTCTCTCACTCACTCTTTAC                                      
JMFF017D11+           CTCTCTCTCACTCACTCTTTAC                                      
JMFF031K02+           CTCTCTCTCACTCACTCTTTACANGGGTAATATGATATGCGCTAAAGATGGGTTCCAAAT
JMFF031I10+           CTCTCTCTCACTCACTCTTTACATGGGTAATATGATATGCGCTAAAGATGGGTTCCAAAT
                      ____________________________________________________________
consensus             CTCTCTCTCACTCACTCTTTACATGGGTAATATGATATGCGCTAAAGATGGGTTCCAAAT