Contig 003204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K01Sequence572003204 (8)ref|XP_006352706.1|3e-47PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]699002615 (6)gb|KJB37783.1|3e-27hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF004F11Sequence513003204 (8)ref|XP_006352706.1|2e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]726002615 (6)gb|KJB37783.1|2e-132hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF020K06Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]746002615 (6)ref|XP_011091390.1|3e-138PREDICTED: probable pectate lyase 8 [Sesamum indicum]
JMFF029H17Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]713002615 (6)gb|KJB37783.1|2e-117hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF031A02Sequence550003204 (8)ref|XP_006352706.1|3e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]665002615 (6)gb|KJB37783.1|1e-17hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF042M17Sequence649003204 (8)ref|XP_006352706.1|4e-64PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]610002615 (6)gb|KJB37783.1|2e-100hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFN039I10Sequence594003204 (8)ref|XP_006352706.1|5e-56PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]
JMFS131B08Sequence615003204 (8)ref|XP_006352706.1|2e-70PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS131B08+ TGTTTGAGCGTGATGACCATGTCTCTTTGGAACACGACCCATAGCGGCTCTTCTTG
JMFF042M17+ ACACGACCCATAGCGGCTCTTCTTG
                      ____________________________________________________________
consensus TGTTTGAGCGTGATGACCATGTCTCTTTGGAACACGACCCATAGCGGCTCTTCTTG
 
. : . : . : . : . : . :
JMFS131B08+ AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
JMFN039I10+ GTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
JMFF001K01+ CTGGGGTC
JMFF042M17+ AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
                      ____________________________________________________________
consensus AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
 
. : . : . : . : . : . :
JMFS131B08+ GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFN039I10+ GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF001K01+ GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF042M17+ GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF029H17+ CGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF004F11+ GCCAATAGC
JMFF020K06+ CGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF031A02+ AGCCAATAGC
                      ____________________________________________________________
consensus GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
 
. : . : . : . : . : . :
JMFS131B08+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFN039I10+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF001K01+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF042M17+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF029H17+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF004F11+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF020K06+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF031A02+ GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
                      ____________________________________________________________
consensus GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
 
. : . : . : . : . : . :
JMFS131B08+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFN039I10+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF001K01+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF042M17+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF029H17+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF004F11+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF020K06+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF031A02+ TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
                      ____________________________________________________________
consensus TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
 
. : . : . : . : . : . :
JMFS131B08+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFN039I10+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF001K01+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF042M17+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF029H17+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF004F11+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF020K06+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF031A02+ AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
                      ____________________________________________________________
consensus AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
 
. : . : . : . : . : . :
JMFS131B08+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFN039I10+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF001K01+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF042M17+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF029H17+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF004F11+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF020K06+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF031A02+ TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
                      ____________________________________________________________
consensus TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
 
. : . : . : . : . : . :
JMFS131B08+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFN039I10+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF001K01+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF042M17+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF029H17+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF004F11+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF020K06+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF031A02+ TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
                      ____________________________________________________________
consensus TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
 
. : . : . : . : . : . :
JMFS131B08+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFN039I10+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF001K01+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF042M17+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF029H17+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF004F11+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF020K06+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF031A02+ TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
                      ____________________________________________________________
consensus TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
 
. : . : . : . : . : . :
JMFS131B08+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFN039I10+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF001K01+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF042M17+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF029H17+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF004F11+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF020K06+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF031A02+ ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
                      ____________________________________________________________
consensus ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
 
. : . : . : . : . : . :
JMFS131B08+ CCTATATATCACAATATGA
JMFN039I10+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF001K01+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF042M17+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF029H17+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF004F11+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF020K06+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF031A02+ CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
                      ____________________________________________________________
consensus CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
 
. : . : . : . : . : . :
JMFN039I10+ AAT
JMFF001K01+ AATGAATGATGAATGAGATGAAGT
JMFF042M17+ AATGAATGATGAATGAGATGAAGT
JMFF029H17+ AATGAATGATGAATGAGATGAAGT
JMFF004F11+ AATGAATGATGAATGAGATGAAGT
JMFF020K06+ AATGAATGATGAATGAGATGAAGT
JMFF031A02+ AATGAATGATGAATGAGATGAAGTGATAAAGTAGAGAAGTGGTACGTACGTTTTTATAGG
                      ____________________________________________________________
consensus AATGAATGATGAATGAGATGAAGTGATAAAGTAGAGAAGTGGTACGTACGTTTTTATAGG