Contig 003204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K01Sequence572003204 (8)ref|XP_006352706.1|3e-47PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]699002615 (6)gb|KJB37783.1|3e-27hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF004F11Sequence513003204 (8)ref|XP_006352706.1|2e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]726002615 (6)gb|KJB37783.1|2e-132hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF020K06Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]746002615 (6)ref|XP_011091390.1|3e-138PREDICTED: probable pectate lyase 8 [Sesamum indicum]
JMFF029H17Sequence539003204 (8)ref|XP_006352706.1|2e-40PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]713002615 (6)gb|KJB37783.1|2e-117hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF031A02Sequence550003204 (8)ref|XP_006352706.1|3e-34PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]665002615 (6)gb|KJB37783.1|1e-17hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFF042M17Sequence649003204 (8)ref|XP_006352706.1|4e-64PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]610002615 (6)gb|KJB37783.1|2e-100hypothetical protein B456_006G219800 [Gossypium raimondii]
JMFN039I10Sequence594003204 (8)ref|XP_006352706.1|5e-56PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]
JMFS131B08Sequence615003204 (8)ref|XP_006352706.1|2e-70PREDICTED: probable pectate lyase 10-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS131B08+               TGTTTGAGCGTGATGACCATGTCTCTTTGGAACACGACCCATAGCGGCTCTTCTTG
JMFF042M17+                                              ACACGACCCATAGCGGCTCTTCTTG
                      ____________________________________________________________
consensus                 TGTTTGAGCGTGATGACCATGTCTCTTTGGAACACGACCCATAGCGGCTCTTCTTG
 
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JMFS131B08+           AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
JMFN039I10+                    GTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
JMFF001K01+                                                               CTGGGGTC
JMFF042M17+           AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
                      ____________________________________________________________
consensus             AATCACGGCGTAACGTAATGTCCCGGGCTTAGGATTTATGACGTCGTCGTCACTGGGGTC
 
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JMFS131B08+           GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFN039I10+           GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF001K01+           GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF042M17+           GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF029H17+                                    CGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF004F11+                                                              GCCAATAGC
JMFF020K06+                                    CGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
JMFF031A02+                                                             AGCCAATAGC
                      ____________________________________________________________
consensus             GGTGACAACGTAGTACTTGCCGTCTCGGCCGCCAATGGCGTTCCGGCCAAAGCCAATAGC
 
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JMFS131B08+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFN039I10+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF001K01+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF042M17+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF029H17+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF004F11+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF020K06+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
JMFF031A02+           GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
                      ____________________________________________________________
consensus             GCAGTCAGCTAGGCGCTTGCGGTTGCGTGCCCAGTTAGTGTCGCAACGCCAGCAGTCATC
 
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JMFS131B08+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFN039I10+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF001K01+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF042M17+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF029H17+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF004F11+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF020K06+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
JMFF031A02+           TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
                      ____________________________________________________________
consensus             TATGGGGTTCCCCGTTGCACACGAGAAGTAGCCCAGTTTTCTCCTCTCCGTGGCATTACG
 
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JMFS131B08+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFN039I10+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF001K01+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF042M17+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF029H17+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF004F11+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF020K06+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
JMFF031A02+           AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
                      ____________________________________________________________
consensus             AACGCTCCTGTCAACCATAGATGCAATTGCCTCTGGATCATCTACCGCATCCTCGTGCTG
 
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JMFS131B08+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFN039I10+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF001K01+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF042M17+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF029H17+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF004F11+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF020K06+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
JMFF031A02+           TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
                      ____________________________________________________________
consensus             TGATTCATAACTATTATTCAATCTATCCGCCATTGATGATTTTTCCAAGCTCCAAAGCTC
 
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JMFS131B08+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFN039I10+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF001K01+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF042M17+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF029H17+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF004F11+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF020K06+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
JMFF031A02+           TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
                      ____________________________________________________________
consensus             TGTCTCTTCAGCTCTCTGCTGGCTCATTGCGGAAGCATTGAGAAACAGAAAGGCCAGAGC
 
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JMFS131B08+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFN039I10+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF001K01+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF042M17+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF029H17+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF004F11+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF020K06+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
JMFF031A02+           TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
                      ____________________________________________________________
consensus             TGCTAGCAAGGACCAATGAAAGACCAATCGCCAATAACTCGATGATGCCGCCGCCATTGG
 
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JMFS131B08+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFN039I10+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF001K01+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF042M17+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF029H17+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF004F11+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF020K06+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
JMFF031A02+           ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
                      ____________________________________________________________
consensus             ATACCGAACTCGATTAAACCTGCAGTTTCAAGCTAGGAACAATGAATTGAATTCGGTCTT
 
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JMFS131B08+           CCTATATATCACAATATGA                                         
JMFN039I10+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF001K01+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF042M17+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF029H17+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF004F11+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF020K06+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
JMFF031A02+           CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
                      ____________________________________________________________
consensus             CCTATATATCACAATATGATCCAATAATAATACGTTGCTGTTTCTGTTGTAGTGCGTATG
 
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JMFN039I10+           AAT                                                         
JMFF001K01+           AATGAATGATGAATGAGATGAAGT                                    
JMFF042M17+           AATGAATGATGAATGAGATGAAGT                                    
JMFF029H17+           AATGAATGATGAATGAGATGAAGT                                    
JMFF004F11+           AATGAATGATGAATGAGATGAAGT                                    
JMFF020K06+           AATGAATGATGAATGAGATGAAGT                                    
JMFF031A02+           AATGAATGATGAATGAGATGAAGTGATAAAGTAGAGAAGTGGTACGTACGTTTTTATAGG
                      ____________________________________________________________
consensus             AATGAATGATGAATGAGATGAAGTGATAAAGTAGAGAAGTGGTACGTACGTTTTTATAGG