Contig 003200:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021D11Sequence503003200 (11)ref|XP_009779239.1|6e-85PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]800003200 (11)gb|ABW79813.1|1e-138malate dehydrogenase [Perilla frutescens]
JMFF030J11Sequence424003200 (11)gb|AIE54283.1|7e-65glyoxisomal malate dehydrogenase [Nicotiana tabacum]725003200 (11)gb|ABW79813.1|2e-140malate dehydrogenase [Perilla frutescens]
JMFF041J10Sequence662003200 (11)ref|XP_009779239.1|1e-127PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]587003200 (11)gb|ABW79813.1|1e-72malate dehydrogenase [Perilla frutescens]
JMFF045P19Sequence636003200 (11)ref|XP_009779239.1|4e-120PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]616003200 (11)gb|ABW79813.1|2e-101malate dehydrogenase [Perilla frutescens]
JMFN012G06Sequence628003200 (11)ref|XP_009779239.1|4e-136PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]
JMSF030J02Sequence655003200 (11)ref|XP_009779239.1|1e-125PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]659014010 (2)gb|ABW79813.1|3e-65malate dehydrogenase [Perilla frutescens]
JMSF043E19Sequence800003200 (11)ref|XP_009779239.1|5e-162PREDICTED: malate dehydrogenase, glyoxysomal [Nicotiana sylvestris]328014010 (2)ref|XP_009611120.1|2e-22PREDICTED: wound-induced basic protein-like [Nicotiana tomentosiformis] ref|XP_0

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF041J10- AATGCAATTGTAAATACTTTC
                      ____________________________________________________________
consensus AATGCAATTGTAAATACTTTC
 
. : . : . : . : . : . :
rJMFF041J10- TTGATTGCTCGTGAATACGGAGAATGCATAGTGAACTTTCCTCAAGCAAGAACAGTAAAG
rJMFF021D11- ACTTTCCTCAAGCAAGAACAGTAAAG
                      ____________________________________________________________
consensus TTGATTGCTCGTGAATACGGAGAATGCATAGTGAACTTTCCTCAAGCAAGAACAGTAAAG
 
. : . : . : . : . : . :
rJMFF041J10- CACATATAGTTTTTGTATAGGGGAGTGGTTTCCATGCTAGAGAAGTGAGATTTTCATGGC
rJMFF045P19- TTTCTATGCTAGAGAAGTGAGATTTTCATGGC
rJMFF021D11- CACATATAGTTTTTGTATAGGGGAGTGGTTTCCATGCTAGAGAAGTGAGATTTTCATGGC
                      ____________________________________________________________
consensus CACATATAGTTTTTGTATAGGGGAGTGGTTTCCATGCTAGAGAAGTGAGATTTTCATGGC
 
. : . : . : . : . : . :
rJMFF041J10- TCTTCTTATCAGTTACATTTATGTAGAAATACATGACCTTAATGACAATGGGATATTCCC
rJMFF045P19- TCTTCTTAT-AGTTACATTTATGTAGAAATACATGACCTTAATGACAATGGGATATTCCC
rJMFF021D11- TCTTCTTATCAGTTACATTTATGTAGAAATACATGACCTTAATGACAATGGGATATTCCC
rJMFF030J11- AGTTACATTTATGTAGAAATACATGACCTTAATGACAATGGGATATTCCC
                      ____________________________________________________________
consensus TCTTCTTATCAGTTACATTTATGTAGAAATACATGACCTTAATGACAATGGGATATTCCC
 
. : . : . : . : . : . :
rJMFF041J10- AGATTTCTATTTCTTGATGAAAGAAACCCCCTTCTGAATGCTGGATGCCAACTCTTGCTT
rJMFF045P19- AGATTTCTATTTCTTGATGAAAGAAACCCCCTTCTGAATGCTGGATGCCAACTCTTGCTT
rJMFF021D11- AGATTTCTATTTCTTGATGAAAGAAACCCCCTTCTGAATGCTGGATGCCAACTCTTGCTT
rJMFF030J11- AGATTTCTATTTCTTGATGAAAGAAACCCCCTTCTGAATGCTGGATGCCAACTCTTGCTT
                      ____________________________________________________________
consensus AGATTTCTATTTCTTGATGAAAGAAACCCCCTTCTGAATGCTGGATGCCAACTCTTGCTT
 
. : . : . : . : . : . :
rJMFF041J10- TGCCTTCTCCAATCCAATCCTTTCATACTCATTCAGGGGTCCAAGTTGGTACACCTCCTC
rJMFF045P19- TGCCTTCTCCAATCCAATCCTTTCATACTCATTCAGGGGTCCAAGTTGGTACACCTCCTC
rJMFF021D11- TGCCTTCTCCAATCCAATCCTTTCATACTCATTCAGGGGTCCAAGTTGGTACACCTCCTC
rJMFF030J11- TGCCTTCTCCAATCCAATCCTTTCATACTCATTCAGGGGTCCAAGTTGGTACACCTCCTC
                      ____________________________________________________________
consensus TGCCTTCTCCAATCCAATCCTTTCATACTCATTCAGGGGTCCAAGTTGGTACACCTCCTC
 
. : . : . : . : . : . :
rJMFF041J10- AGCTCCACCGCGCCCAAGCCTCACCTTAGAGGCAAAGAAAGGGAGTTCTGTCACCTTAGA
rJMFF045P19- AGCTCCACCGCGCCCAAGCCTCACCTTAGAGGCAAAGAAAGGGAGTTCTGTCACCTTAGA
rJMFF021D11- AGCTCCACCGCGCCCAAGCCTCACCTTAGAGGCAAAGAAAGGGAGTTCTGTCACCTTAGA
rJMFF030J11- AGCTCCACCGCGCCCAAGCCTCACCTTAGAGGCAAAGAAAGGGAGTTCTGTCACCTTAGA
                      ____________________________________________________________
consensus AGCTCCACCGCGCCCAAGCCTCACCTTAGAGGCAAAGAAAGGGAGTTCTGTCACCTTAGA
 
. : . : . : . : . : . :
rJMFF041J10- ATCTACGTAGGCACATGCCACGATACCAGCATCTCCTCTTAAGCCCCGGAGGCATAAATC
rJMFF045P19- ATCTACGTAGGCACATGCCACGATACCAGCATCTCCTCTTAAGCCCCGGAGGCATAAATC
rJMFF021D11- ATCTACGTAGGCACATGCCACGATACCAGCATCTCCTCTTAAGCCCCGGAGGCATAAATC
rJMFF030J11- ATCTACGTAGGCACATGCCACGATACCAGCATCTCCTCTTAAGCCCCGGAGGCATAAATC
                      ____________________________________________________________
consensus ATCTACGTAGGCACATGCCACGATACCAGCATCTCCTCTTAAGCCCCGGAGGCATAAATC
 
. : . : . : . : . : . :
rJMFF041J10- TGCAAATTTAACAGCAGCGTATGCCATTGATAAAGTTGCAGATCCTGCCCCGGCCTTCGC
rJMFF045P19- TGCAAATTTAACAGCAGCGTATGCCATTGATAAAGTTGCAGATCCTGCCCCGGCCTTCGC
rJMFF021D11- TGCAAATTTAACAGCAGCGTATGCCATTGATAAAGTTGCAGATCCTGCCCCGGCCTTCGC
rJMFF030J11- TGCAAATTTAACAGCAGCGTATGCCATTGATAAAGTTGCAGATCCTGCCCCGGCCTTCGC
                      ____________________________________________________________
consensus TGCAAATTTAACAGCAGCGTATGCCATTGATAAAGTTGCAGATCCTGCCCCGGCCTTCGC
 
. : . : . : . : . : . :
rJMFF041J10- CTGAACTACTTCTGTCCCACCGTCTTGAATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
rJMFF045P19- CTGAACTACTTCTGTCCCACCGTCTTGAATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
rJMFF021D11- CTGAACTACTTCTGTCCCACCGTCTTGAATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
rJMFF030J11- CTGAACTACTTCTGTCCCACCGTCTTGAATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
JMSF043E19+ AATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
                      ____________________________________________________________
consensus CTGAACTACTTCTGTCCCACCGTCTTGAATGCGCTTTGTCAGGAATTCTGTTTCCTCGGG
 
. : . : . : . : . : . :
rJMFF041J10- GGTGAATGAGCATGGCGGTTTGACCT
rJMFF045P19- GGTGAATGAGCATGGCGGTTTGACCTGAGAGAGAAGAGGCAAAATCGTCACCCCTGCATG
rJMFF021D11- GGTGAATGAGCATGGCGGTTTGACCTGAGAGAGAAGAGGCAAAATCGTCACCCCTGCATG
rJMFF030J11- GGTGAATGAGCATGGCGGTTTGACCTGAGAGAGAAGAGGCAAAATCGTCACCCCTGCATG
JMFN012G06+ GCATG
JMSF043E19+ GGTGAATGAGCATGGCGGTTTGACCTGAGAGAGAAGAGGCAAAATCGTCACCCCTGCATG
                      ____________________________________________________________
consensus GGTGAATGAGCATGGCGGTTTGACCTGAGAGAGAAGAGGCAAAATCGTCACCCCTGCATG
 
. : . : . : . : . : . :
rJMFF045P19- ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
rJMFF021D11- ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
rJMFF030J11- ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
JMFN012G06+ ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
JMSF043E19+ ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
JMSF030J02+ GCCACGAA
JMFF041J10+ AAACTTCTGCCACGAA
                      ____________________________________________________________
consensus ACCTCCAACAACAGGAACATCAACCTCCCTAGGATCTAGTCCCAAAACTTCTGCCACGAA
 
. : . : . : . : . : . :
rJMFF045P19- AGTGTTGGCTCTCACAACGTC
rJMFF021D11- AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
rJMFF030J11- AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
JMFN012G06+ AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
JMSF043E19+ AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
JMSF030J02+ AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
JMFF041J10+ AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
JMFF045P19+ CAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
                      ____________________________________________________________
consensus AGTGTTGGCTCTCACAACGTCGAGCATGGTGACTCCAAGAAGCTTCTTAGGATCATAGAT
 
. : . : . : . : . : . :
rJMFF021D11- GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
rJMFF030J11- GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
JMFN012G06+ GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
JMSF043E19+ GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
JMSF030J02+ GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
JMFF041J10+ GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
JMFF045P19+ GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
                      ____________________________________________________________
consensus GCCCGCTTTCTTGAAAACTTCTGCTGCAATTGGAACTGTGGAGTTGACAGGATTGCTGAT
 
. : . : . : . : . : . :
rJMFF021D11- CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCT
rJMFF030J11- CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMFN012G06+ CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMSF043E19+ CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMSF030J02+ CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMFF041J10+ CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMFF045P19+ CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
JMFF021D11+ CCTTCGCACAGCGTCCTCACAAT
                      ____________________________________________________________
consensus CAAGTTGACGAGTGCATTTGGGCAGCACTTGGCGATTCCTTCGCACAGCGTCCTCACAAT
 
. : . : . : . : . : . :
rJMFF030J11- CC
JMFN012G06+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMSF043E19+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMSF030J02+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMFF041J10+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMFF045P19+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMFF021D11+ CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
JMFF030J11+ CAGC
                      ____________________________________________________________
consensus CCCGGCATTGATGTTGAAAAGGTCATCTCTCGTCATTCCTGGCTTCCTCGGCACACCAGC
 
. : . : . : . : . : . :
JMFN012G06+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMSF043E19+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMSF030J02+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMFF041J10+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMFF045P19+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMFF021D11+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
JMFF030J11+ AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
                      ____________________________________________________________
consensus AGGAATGACCACAAGATCCATCCCTGTCAGGGCAGCCTCGAGCTCTTTCTGTCCCAGAAA
 
. : . : . : . : . : . :
JMFN012G06+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMSF043E19+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMSF030J02+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMFF041J10+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMFF045P19+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMFF021D11+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
JMFF030J11+ ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
                      ____________________________________________________________
consensus ACCTCGCACAACAGCACCGGTGTCCATGTGGCTAATATCAGCAGTGACACCCGGGCTGTT
 
. : . : . : . : . : . :
JMFN012G06+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMSF043E19+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMSF030J02+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMFF041J10+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMFF045P19+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMFF021D11+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
JMFF030J11+ GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
                      ____________________________________________________________
consensus GACGACATCATAGAGGTGAAGAACCGACACCAGTGGATTCATCTTCATCAACATTGCGAG
 
. : . : . : . : . : . :
JMFN012G06+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMSF043E19+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMSF030J02+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMFF041J10+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMFF045P19+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMFF021D11+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
JMFF030J11+ TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
                      ____________________________________________________________
consensus TGGTTGACCAATGCCTCCAGCAGCACCAAGAATCGCAACTTTGAACCCGGGTGCACCACC
 
. : . : . : . : . : . :
JMFN012G06+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMSF043E19+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMSF030J02+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMFF041J10+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMFF045P19+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMFF021D11+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
JMFF030J11+ TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
                      ____________________________________________________________
consensus TTTTGCTCTGCAGTTAGCCCTCTCCAACATGGAACTCTCCCCCATCTGAAGATTTGAAGG
 
. : . : . : . : . : . :
JMFN012G06+ ACTGATATGAGCCGACAGTCTTG
JMSF043E19+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
JMSF030J02+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
JMFF041J10+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
JMFF045P19+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
JMFF021D11+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
JMFF030J11+ ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
                      ____________________________________________________________
consensus ACTGATATGAGCCGACAGTCTTGCAATACGTTCTGCAGTTGAAGGCTGCATCTTTCTGTA
 
. : . : . : . : . : . :
JMSF043E19+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAG
JMSF030J02+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAG
JMFF041J10+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAGT
JMFF045P19+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAGT
JMFF021D11+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAGTGTGGAAAAAAG
JMFF030J11+ CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAGTGTGGAAAAAAGNGT
                      ____________________________________________________________
consensus CAAGTTTGGGTTACTACAACCAGTAAGGCTGTGTGTTGATGAAAGTGTGGAAAAAAGNGT