Contig 003194:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011E01Sequence464003194 (3)emb|CDP06048.1|8e-22unnamed protein product [Coffea canephora]586002585 (3)ref|XP_009783768.1|2e-44PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]
JMFF022K21Sequence472003194 (3)emb|CDP06048.1|2e-24unnamed protein product [Coffea canephora]694002585 (3)ref|XP_009783768.1|1e-65PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]
JMFF029A09Sequence503003194 (3)emb|CDP06048.1|3e-31unnamed protein product [Coffea canephora]686002585 (3)ref|XP_009783768.1|5e-63PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF029A09+ GCGAGTCTCCCACAAACATAATC
                      ____________________________________________________________
consensus GCGAGTCTCCCACAAACATAATC
 
. : . : . : . : . : . :
JMFF022K21+ TCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
JMFF011E01+ GCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
JMFF029A09+ TTCTTCCCTCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
                      ____________________________________________________________
consensus TTCTTCCCTCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
 
. : . : . : . : . : . :
JMFF022K21+ GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
JMFF011E01+ GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
JMFF029A09+ GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
                      ____________________________________________________________
consensus GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
 
. : . : . : . : . : . :
JMFF022K21+ AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
JMFF011E01+ AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
JMFF029A09+ AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
                      ____________________________________________________________
consensus AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
 
. : . : . : . : . : . :
JMFF022K21+ ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
JMFF011E01+ ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
JMFF029A09+ ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
                      ____________________________________________________________
consensus ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
 
. : . : . : . : . : . :
JMFF022K21+ CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
JMFF011E01+ CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
JMFF029A09+ CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
                      ____________________________________________________________
consensus CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
 
. : . : . : . : . : . :
JMFF022K21+ CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
JMFF011E01+ CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
JMFF029A09+ CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
                      ____________________________________________________________
consensus CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
 
. : . : . : . : . : . :
JMFF022K21+ AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
JMFF011E01+ AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
JMFF029A09+ AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
                      ____________________________________________________________
consensus AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
 
. : . : . : . : . : . :
JMFF022K21+ TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCT
JMFF011E01+ TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCT
JMFF029A09+ TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCTACT
                      ____________________________________________________________
consensus TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCTACT