Contig 003194:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011E01Sequence464003194 (3)emb|CDP06048.1|8e-22unnamed protein product [Coffea canephora]586002585 (3)ref|XP_009783768.1|2e-44PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]
JMFF022K21Sequence472003194 (3)emb|CDP06048.1|2e-24unnamed protein product [Coffea canephora]694002585 (3)ref|XP_009783768.1|1e-65PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]
JMFF029A09Sequence503003194 (3)emb|CDP06048.1|3e-31unnamed protein product [Coffea canephora]686002585 (3)ref|XP_009783768.1|5e-63PREDICTED: protein trichome birefringence-like 42 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF029A09+                                                GCGAGTCTCCCACAAACATAATC
                      ____________________________________________________________
consensus                                                  GCGAGTCTCCCACAAACATAATC
 
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JMFF022K21+                   TCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
JMFF011E01+                              GCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
JMFF029A09+           TTCTTCCCTCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
                      ____________________________________________________________
consensus             TTCTTCCCTCTAAACCTTTGCAGGAATGCTTCCCCATCAAACCTGTGAAGGTCACAGTGA
 
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JMFF022K21+           GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
JMFF011E01+           GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
JMFF029A09+           GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
                      ____________________________________________________________
consensus             GTAGGCTGCCATTTATACTTGAGGTAAAGCTTATCGGGTCTGCCATTCTTCTGGCAATTC
 
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JMFF022K21+           AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
JMFF011E01+           AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
JMFF029A09+           AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
                      ____________________________________________________________
consensus             AACCCTGCGTCGATAAATGGGCACTCTTCATAAAGTGGGTATGAATCATCTTCAACTTCA
 
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JMFF022K21+           ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
JMFF011E01+           ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
JMFF029A09+           ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
                      ____________________________________________________________
consensus             ACCCAGCTCCCTTCAAAAAAATCGCAGCTTTCTGATGATTCACTTCTCTGCTCTTTCGGG
 
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JMFF022K21+           CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
JMFF011E01+           CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
JMFF029A09+           CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
                      ____________________________________________________________
consensus             CCTTCTGCATTTACCAAATACAGTGACGGAAATAGTAGGAGAACATTAAGGAGAAGGAGC
 
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JMFF022K21+           CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
JMFF011E01+           CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
JMFF029A09+           CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
                      ____________________________________________________________
consensus             CTTAAATCATGACTCCAAACACCCATTCTGATTTCTGAGCTCTAACCAGACAAATATGGA
 
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JMFF022K21+           AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
JMFF011E01+           AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
JMFF029A09+           AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
                      ____________________________________________________________
consensus             AAAGGAGAAAAGCTCAGAAAAGAATGATAATGGGGAAAAAGTGCACAGAAAAAGGCTTTT
 
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JMFF022K21+           TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCT   
JMFF011E01+           TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCT   
JMFF029A09+           TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCTACT
                      ____________________________________________________________
consensus             TATAGCTCAATGAGTTAATGCTGCAGATTTGGGAAATGATTCCACCAATATTTGTCTACT