Contig 003192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028P13Sequence528003192 (2)ref|XP_009781429.1|2e-09PREDICTED: DNA-binding protein S1FA-like [Nicotiana sylvestris]130003192 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF028P13- CTTCTGCGGAACCTGACGAATCGCGGTGACGACAACTCTGTCTCCGAAG
                      ____________________________________________________________
consensus CTTCTGCGGAACCTGACGAATCGCGGTGACGACAACTCTGTCTCCGAAG
 
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JMFF028P13- ATCAGATCGCTTTCTTCCCCTCCCGGCCATGGATTACGAAGGAGAGTTCGAGCACGATGC
                      ____________________________________________________________
consensus ATCAGATCGCTTTCTTCCCCTCCCGGCCATGGATTACGAAGGAGAGTTCGAGCACGATGC
 
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JMFF028P13- TCCTCCGTCATTCGACGGAATGAGAAATATGGCTCAGGATGTTGAAGTTAAGGGGTTCAA
                      ____________________________________________________________
consensus TCCTCCGTCATTCGACGGAATGAGAAATATGGCTCAGGATGTTGAAGTTAAGGGGTTCAA
 
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JMFF028P13- CCCTGGATTAATTGTCCTACTTCTCGTTGGTGGTCTTCTACTAGCATTCTTCGTTGGGAA
                      ____________________________________________________________
consensus CCCTGGATTAATTGTCCTACTTCTCGTTGGTGGTCTTCTACTAGCATTCTTCGTTGGGAA
 
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JMFF028P13- TTTCTTGCTTTATAGGTACGCACAAAAGGCTCTTCCCCCGAAGAAAAAGAAGCCAATCTC
                      ____________________________________________________________
consensus TTTCTTGCTTTATAGGTACGCACAAAAGGCTCTTCCCCCGAAGAAAAAGAAGCCAATCTC
 
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JMFF028P13- CAAGAAGAAGATGAAGAAGGAAAGACTGAGGCAAGGCGTCTCTGCACCCGGAGAATAGAT
                      ____________________________________________________________
consensus CAAGAAGAAGATGAAGAAGGAAAGACTGAGGCAAGGCGTCTCTGCACCCGGAGAATAGAT
 
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rJMFF028P13+ ATACATAGAAATAGTCCATTTTAATGTTGCAGATGCAGTGTCTTAATCTGTCT
JMFF028P13- GTAATAGATACATAGAAATAGTCCATTTTAATGTTG-AGATGCAGTGTCTTAATCTGTCT
                      ____________________________________________________________
consensus GTAATAGATACATAGAAATAGTCCATTTTAATGTTGCAGATGCAGTGTCTTAATCTGTCT
 
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rJMFF028P13+ GACAAACTTTTTTTCCCAGAGATGGTTGCCTTTTGTTTATGAACAANGAATGCCCTTTAT
JMFF028P13- GACAAACTTTTTTTCCCAGAGATGGTTGCCTTTTGTTTATGAACAATGAATGCCCTTTAT
                      ____________________________________________________________
consensus GACAAACTTTTTTTCCCAGAGATGGTTGCCTTTTGTTTATGAACAATGAATGCCCTTTAT
 
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rJMFF028P13+ T
JMFF028P13- TCTTATCCCAACTTGATGAATTGAAGATTTTAGTTTCTCTTGTGCTGGCTAAAAAAAAAA
                      ____________________________________________________________
consensus TCTTATCCCAACTTGATGAATTGAAGATTTTAGTTTCTCTTGTGCTGGCTAAAAAAAAAA