Contig 003191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028P01Sequence395003191 (2)ref|XP_009768915.1|2e-11PREDICTED: defensin-like protein isoform X2 [Nicotiana sylvestris]364003191 (2)ref|XP_009768915.1|1e-11PREDICTED: defensin-like protein isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF028P01-                                    GAGCTGTACTGACTCAAAACTCCCACTTTTGTGTG
                      ____________________________________________________________
consensus                                      GAGCTGTACTGACTCAAAACTCCCACTTTTGTGTG
 
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JMFF028P01-           CTTGCAGACATGGGAAGAAACACAATAATGGTGACGGAGGCGAACAACTGCCCGAGGACC
                      ____________________________________________________________
consensus             CTTGCAGACATGGGAAGAAACACAATAATGGTGACGGAGGCGAACAACTGCCCGAGGACC
 
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rJMFF028P01+                     GTTCAAGGGGCCATGTGTTAAGGGCGGAAATTGCGCACCGACTTGCAAG
JMFF028P01-           CCGAGCGCCCTGTTCAAGGGGCCATGTGTTAAGGGCGGAAATTGCGCACCGACTTGCAAG
                      ____________________________________________________________
consensus             CCGAGCGCCCTGTTCAAGGGGCCATGTGTTAAGGGCGGAAATTGCGCACCGACTTGCAAG
 
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rJMFF028P01+          GAGGAGGGGTACCCCGACGGCGAGTGCAAAGGGTTCAAGCGTCAATGCTTCTGCATTAAG
JMFF028P01-           GAGGAGGGGTACCCCGACGGCGAGTGCAAAGGGTTCAAGCGTCAATGCTTCTGCATTAAG
                      ____________________________________________________________
consensus             GAGGAGGGGTACCCCGACGGCGAGTGCAAAGGGTTCAAGCGTCAATGCTTCTGCATTAAG
 
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rJMFF028P01+          CGTTGCTAATTCATCTACCTATAGAGCCAGATGTGGATTACTCTTCTCTTTGCTTTTGGC
JMFF028P01-           CGTTGCTAATTCATCTACCTATAGAGCCAGATGTGGATTACTCTTCTCTTTGCTTTTGGC
                      ____________________________________________________________
consensus             CGTTGCTAATTCATCTACCTATAGAGCCAGATGTGGATTACTCTTCTCTTTGCTTTTGGC
 
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rJMFF028P01+          AAAATCAGAATTCAAATTCAGTCTGGTCAATATACTAAATTTGATATATAAAAATATGAA
JMFF028P01-           AAAATCAGAATTCAAATTCAGTCTGGTCAATATACTAAATTTGATATATAAAAATATGAA
                      ____________________________________________________________
consensus             AAAATCAGAATTCAAATTCAGTCTGGTCAATATACTAAATTTGATATATAAAAATATGAA
 
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rJMFF028P01+          TGTGGTAATAAGTTATATTTATAAATAAA                               
JMFF028P01-           TGTGGTAATAAGTTATATTTATAAATAAATGTTTTAATTTTACAACTGCCAAAAAAAAAA
                      ____________________________________________________________
consensus             TGTGGTAATAAGTTATATTTATAAATAAATGTTTTAATTTTACAACTGCCAAAAAAAAAA