Contig 003189:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007M19Sequence484003189 (4)emb|CDO98624.1|1e-60unnamed protein product [Coffea canephora]714008248 (2)emb|CDP07714.1|1e-19unnamed protein product [Coffea canephora]
JMFF028J11Sequence554003189 (4)emb|CDO98624.1|3e-67unnamed protein product [Coffea canephora]717008248 (2)emb|CDP07714.1|1e-19unnamed protein product [Coffea canephora]
JMFS028G06Sequence676003189 (4)ref|XP_006347366.1|301PREDICTED: uncharacterized protein LOC102594326 [Solanum tuberosum]
JMFS147G09Sequence624003189 (4)ref|XP_006347366.1|300PREDICTED: uncharacterized protein LOC102594326 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS028G06+ GCAGCCAAGCCATCATGATCAGCTCTCCTGTATATTTCAGTTACTGACAACNCCAT
                      ____________________________________________________________
consensus GCAGCCAAGCCATCATGATCAGCTCTCCTGTATATTTCAGTTACTGACAACNCCAT
 
. : . : . : . : . : . :
JMFS028G06+ GGGATCATCTGCAGGCCCAACTCCATCAACAGCTTTTGACTTGATATACTGCTCCCCTGA
JMFS147G09+ CCTGA
                      ____________________________________________________________
consensus GGGATCATCTGCAGGCCCAACTCCATCAACAGCTTTTGACTTGATATACTGCTCCCCTGA
 
. : . : . : . : . : . :
JMFS028G06+ AAAGTAAGAATCTTCTTCTGCAAAAGATTGGTCATCTTCTTCTCTGTTTTGACTTCTTTG
JMFS147G09+ AAAGTAAGAGTCTTCTTCTGCAAATGATTGGTCATCTTCTTCTCTGTTTTGACTTCTTTG
                      ____________________________________________________________
consensus AAAGTAAGAGTCTTCTTCTGCAAATGATTGGTCATCTTCTTCTCTGTTTTGACTTCTTTG
 
. : . : . : . : . : . :
JMFS028G06+ AGGGTCAGGTACACTCCCATGTCCTGTTCCCTTCTCAGTGTCACTTGGGTAATCAATTTC
JMFS147G09+ AGGGTCAGGTACACTCCCATGTCCCGTTCCCTTCTCAGTATCACTTGGATAATCAATTTC
                      ____________________________________________________________
consensus AGGGTCAGGTACACTCCCATGTCCTGTTCCCTTCTCAGTGTCACTTGGGTAATCAATTTC
 
. : . : . : . : . : . :
JMFS028G06+ ATGAGACAAAAACCAGGTCTCATCTTCAATAGGTTGCCTAGTGTAGCCTACATCATCATC
JMFS147G09+ ATGAGACAAAAACCAGGTCTCATCTTCAATAGGTTGCCTAGTGTAGCCTACATCATCATC
JMFF028J11+ CCTACATCATCATC
                      ____________________________________________________________
consensus ATGAGACAAAAACCAGGTCTCATCTTCAATAGGTTGCCTAGTGTAGCCTACATCATCATC
 
. : . : . : . : . : . :
JMFS028G06+ ATCGTCATATTCATCAGAGTCCCAATATTCAGTTGGATAGTCAACAGGTTCACTAAGTCC
JMFS147G09+ ATCATCATATTCATCAGAGTCCCAATATTCAGTTGGATAGTCAACTGGTTCACTAAGTCC
JMFF007M19+ GTCC
JMFF028J11+ ATCATCATATTCATCAGAGTCCCAATATTCAGTTGGATAGTCAACTGGTTCACTAAGTCC
                      ____________________________________________________________
consensus ATCATCATATTCATCAGAGTCCCAATATTCAGTTGGATAGTCAACTGGTTCACTAAGTCC
 
. : . : . : . : . : . :
JMFS028G06+ ACCAATAGTTGCGAAACCAGAAATAAGATCAGAAGTGTCCCCAGCAATTCCCTGACTCAC
JMFS147G09+ ACCAATAGTTGCAAAACCAGAAACAAGATCAGAAGTGTCCCCAACAATGCCCTGACTCAC
JMFF007M19+ ACCAATAGTTGCAAAACCAGAAACAAGATCAGAAGTGTCCCCAACAATGCCCTGACTCAC
JMFF028J11+ ACCAATAGTTGCAAAACCAGAAACAAGATCAGAAGTGTCCCCAACAATGCCCTGACTCAC
                      ____________________________________________________________
consensus ACCAATAGTTGCAAAACCAGAAACAAGATCAGAAGTGTCCCCAACAATGCCCTGACTCAC
 
. : . : . : . : . : . :
JMFS028G06+ AGAGAACAAACTACCTTCCACAGGCCTTTTTCCACCTGAAGGGTTAATTTCTTGTCCTAC
JMFS147G09+ AGAGAGCAAACTACCTCCCACAAATCTTTTGCCACCTGAAGGGTTAATTTCTTGTCCTAC
JMFF007M19+ AGAGAGCAAACTACCTCCCACAAATCTTTTGCCACCTGAAGGGTTAATTTCTTGTCCTAC
JMFF028J11+ AGAGAGCAAACTACCTCCCACAAATCTTTTGCCACCTGAAGGGTTAATTTCTTGTCCTAC
                      ____________________________________________________________
consensus AGAGAGCAAACTACCTCCCACAAATCTTTTGCCACCTGAAGGGTTAATTTCTTGTCCTAC
 
. : . : . : . : . : . :
JMFS028G06+ AGGAACATCCAGAAATGACCCTATAGGATAGCCTTTATCAGTATTAGAAATACTTAAGTC
JMFS147G09+ AGGAACATCCAGAAATGACCCAATAAGATAGGTTTGATCAGTACTAGAAATACTCAAGTC
JMFF007M19+ AGGAACATCCAGAAATGACCCAATAAGATAGGTTTGATCAGTACTAGAAATACTCAAGTC
JMFF028J11+ AGGAACATCCAGAAATGACCCAATAAGATAGGTTTGATCAGTACTAGAAATACTCAAGTC
                      ____________________________________________________________
consensus AGGAACATCCAGAAATGACCCAATAAGATAGGTTTGATCAGTACTAGAAATACTCAAGTC
 
. : . : . : . : . : . :
JMFS028G06+ ATTTGAATCTCGTTCAAACTTTTCTACCCAATGAATATCAAATAGCTTCTCTTCTGATTT
JMFS147G09+ ATTTCCATCTCGTTCAAACTTTTCTACCCAATGAATATTAAACGGCTTCTCTTCTGATTT
JMFF007M19+ ATTTCCATCTCGTTCAAACTTTTCTACCCAATGAATATTAAACGGCTTCTCTTCTGATTT
JMFF028J11+ ATTTCCATCTCGTTCAAACTTTTCTACCCAATGAATATTAAACGGCTTCTCTTCTGATTT
                      ____________________________________________________________
consensus ATTTCCATCTCGTTCAAACTTTTCTACCCAATGAATATTAAACGGCTTCTCTTCTGATTT
 
. : . : . : . : . : . :
JMFS028G06+ GAGTCTAACAGGTGGTAATCTGGGTAGCTCTTCCTTTTGGTTCTCTGATCCAAGTGGAAG
JMFS147G09+ GAGTCTAACAGGTGGTAATCTAGGTAGCTCTTCCGTTTGGTTCTCTGATCCAAGTGGAAG
JMFF007M19+ GAGTCTAACAGGTGGTAATCTAGGTAGCTCTTCCGTTTGGTTCTCTGATCCAAGTGGAAG
JMFF028J11+ GAGTCTAACAGGTGGTAATCTAGGTAGCTCTTCCGTTTGGTTCTCTGATCCAAGTGGAAG
                      ____________________________________________________________
consensus GAGTCTAACAGGTGGTAATCTAGGTAGCTCTTCCGTTTGGTTCTCTGATCCAAGTGGAAG
 
. : . : . : . : . : . :
JMFS028G06+ GC
JMFS147G09+ GCTAAAGCCAGAAAGATCCTTTGGCTCACTTCCATGTGCTCTCACAAAGTACAAAGCTCT
JMFF007M19+ GCTAAAGCCAGAAAGATCCTTTGGCTCACTTCCATGTGCTCTCACAAAGTACAAAGCTCT
JMFF028J11+ GCTAAAGCCAGAAAGATCCTTTGGCTCACTTCCATGTGCTCTCACAAAGTACAAAGCTCT
                      ____________________________________________________________
consensus GCTAAAGCCAGAAAGATCCTTTGGCTCACTTCCATGTGCTCTCACAAAGTACAAAGCTCT
 
. : . : . : . : . : . :
JMFS147G09+ TCCAATTTCATCCACTTGC
JMFF007M19+ TCCAATTTCATCCACTTGCTCTTTGATAGCTGCCTTAATGTCAGTAATCTCTGGTTTTCT
JMFF028J11+ TCCAATTTCATCCACTTGCTCTTTGATAGCTGCCTTAATGTCAGTAATCTCTGGTTTTCT
                      ____________________________________________________________
consensus TCCAATTTCATCCACTTGCTCTTTGATAGCTGCCTTAATGTCAGTAATCTCTGGTTTTCT
 
. : . : . : . : . : . :
JMFF007M19+ CTTCTCTTCATTTTTATCACCAATTACAATTTTATGATCATAACTCGTTGATACATCTTC
JMFF028J11+ CTTCTCTTCATTTTTATCACCAATTACAATTTTATGATCATAACTCGTTGATACATCTTC
                      ____________________________________________________________
consensus CTTCTCTTCATTTTTATCACCAATTACAATTTTATGATCATAACTCGTTGATACATCTTC