| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003E23 | Sequence | 362 | 003188 (7) | ref|XP_009614832.1| | 1e-08 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Nicotiana tomentosiformis] | 672 | 003188 (7) | ref|XP_009614832.1| | 5e-120 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Nicotiana tomentosiformis] |
| JMFF027F08 | Sequence | 577 | 003188 (7) | emb|CDP01700.1| | 4e-41 | unnamed protein product [Coffea canephora] | 730 | 003188 (7) | ref|XP_009614832.1| | 8e-141 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Nicotiana tomentosiformis] |
| JMFF027P21 | Sequence | 571 | 003188 (7) | ref|XP_009614832.1| | 1e-50 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Nicotiana tomentosiformis] | 689 | 003188 (7) | ref|XP_009614832.1| | 5e-100 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Nicotiana tomentosiformis] |
| JMFN014E18 | Sequence | 584 | 003188 (7) | ref|XP_004243885.2| | 1e-59 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF003E23- CTCGATTGAGTAATTGGAAAATGCCTAATTAATTCATAATTACATTATTCT
rJMFF027P21- TTATTCT
rJMFF027F08- TTATTCT
____________________________________________________________
consensus CTCGATTGAGTAATTGGAAAATGCCTAATTAATTCATAATTACATTATTCT
. : . : . : . : . : . :
rJMFF003E23- TTAATGTGTTCATATAAAATGGCATCAGAAATGGTACATTTTCGAGTGTTCAAGCTCTGT
rJMFF027P21- TTAATGTGTTCATATAAAATGGCATCAGAAATGGTACATTTTCGAGTGTTCAAGCTCTGT
rJMFF027F08- TTAATGTGTTCATATAAAATGGCATCAGAAATGGTACATTTTCGAGTGTTCAAGCTCTGT
____________________________________________________________
consensus TTAATGTGTTCATATAAAATGGCATCAGAAATGGTACATTTTCGAGTGTTCAAGCTCTGT
. : . : . : . : . : . :
rJMFF003E23- TGTGACATTAAAAAACTTCAACACATGCACCCATTGCTCCCACTTCTTGAGCCGGTGAAC
rJMFF027P21- TGTGACATTAAAAAACTTCAACACATGCACCCATTGCTCCCACTTCTTGAGCCGGTGAAC
rJMFF027F08- TGTGACATTAAAAAACTTCAACACATGCACCCATTGCTCCCACTTCTTGAGCCGGTGAAC
____________________________________________________________
consensus TGTGACATTAAAAAACTTCAACACATGCACCCATTGCTCCCACTTCTTGAGCCGGTGAAC
. : . : . : . : . : . :
rJMFF003E23- CGCAATCGTCTCAGGAATCAGCTCGTGCGAGCACCTTCCGTTAGTCCCCGGATAATCATA
rJMFF027P21- CGCAATCGTCTCAGGAATCAGCTCGTGCGAGCACCTTCCGTTAGTCCCCGGATAATCATA
rJMFF027F08- CGCAATCGTCTCAGGAATCAGCTCGTGCGAGCACCTTCCGTTAGTCCCCGGATAATCATA
____________________________________________________________
consensus CGCAATCGTCTCAGGAATCAGCTCGTGCGAGCACCTTCCGTTAGTCCCCGGATAATCATA
. : . : . : . : . : . :
rJMFF003E23- CATCGCCGGCTTATTGTTGAACCGGTTCTTCGCCTTCTTCCCCATATCCAACCATTGCCC
rJMFF027P21- CATCGCCGGCTTATTGTTGAACCGGTTCTTCGCCTTCTTCCCCATATCCAACCATTGCCC
rJMFF027F08- CATCGCCGGCTTATTGTTGAACCGGTTCTTCGCCTTCTTCCCCATATCCAACCATTGCCC
____________________________________________________________
consensus CATCGCCGGCTTATTGTTGAACCGGTTCTTCGCCTTCTTCCCCATATCCAACCATTGCCC
. : . : . : . : . : . :
rJMFF003E23- CACCAGTTTATCCTCCGGCCCGTACGTATTATTCGCCGGAATTCTGGACCGTCCGATCCA
rJMFF027P21- CACCAGTTTATCCTCCGGCCCGTACGTATTATTCGCCGGAATTCTGGACCGTCCGATCCA
rJMFF027F08- CACCAGTTTATCCTCCGGCCCGTACGTATTATTCGCCGGAATTCTGGACCGTCCGATCCA
____________________________________________________________
consensus CACCAGTTTATCCTCCGGCCCGTACGTATTATTCGCCGGAATTCTGGACCGTCCGATCCA
. : . : . : . : . : . :
rJMFF003E23- CTCCACCAGATCCCACGACAGCACAAACCCCATTCCGGACATGTAATGGACGAACGGGTT
rJMFF027P21- CTCCACCAGATCCCACGACAGCACAAA--CCATTCCGGACATGTAATGGACGAACGGGTT
rJMFF027F08- CTCCACCAGATCCCACGACAGCACAAACCCCATTCCGGACATGTAATGGACGAACGGGTT
JMFN014E18+ CCATTCCGGACATGTAATGGACGAACGGGTT
____________________________________________________________
consensus CTCCACCAGATCCCACGACAGCACAAACCCCATTCCGGACATGTAATGGACGAACGGGTT
. : . : . : . : . : . :
rJMFF003E23- CATGCTCGGACAAGGAATCACGAAACCGTAGTACAAATCCCGCCGCGGCAGTCCCTCCAG
rJMFF027P21- CATGCTCGGACAAGGAATCACGAAACCGTAGTACAAATCCCGCCGCGGCAGTCCCTCCAG
rJMFF027F08- CATGCTCGGACAAGGAATCACGAAACCGTAGTACAAATCCCGCCGCGGCAGTCCCTCCAG
JMFN014E18+ CATGCTCGGACAAGGAATCACGAAACCGTAGTACAAATCCCGCCGCGGCAGTCCCTCCAG
____________________________________________________________
consensus CATGCTCGGACAAGGAATCACGAAACCGTAGTACAAATCCCGCCGCGGCAGTCCCTCCAG
. : . : . : . : . : . :
rJMFF003E23- AGACGCCGCCAACGGCGCCAGCCGGAGGAACACGTCATCGTCGGCCTCCATGACGTAGTC
rJMFF027P21- AGACGCCGCCAACGGCGCCAGCCGGAGGAACACGTCATCGTCGGCCTTCATGACGTAGTC
rJMFF027F08- AGACGCCGCCAACGGCGCCAGCCGGAGGAACACGTCATCGTCGGCCTTCATGACGTAGTC
JMFN014E18+ AGACGCCGCCAACGGCGCCAGCCGGAGGAACACGTCATCGT-GACTTTCATGACGTAGTC
JMFF027F08+ GGAGGAACACGTCATCGTCGGCCTTCATGACGTAGTC
JMFF027P21+ AACACGTCATCGTCGGCCTTCATGACGTAGTC
____________________________________________________________
consensus AGACGCCGCCAACGGCGCCAGCCGGAGGAACACGTCATCGTCGGCCTTCATGACGTAGTC
. : . : . : . : . : . :
rJMFF003E23- GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
rJMFF027P21- GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
rJMFF027F08- GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
JMFN014E18+ GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
JMFF027F08+ GTACCGCGACGGGAAGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
JMFF027P21+ GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
____________________________________________________________
consensus GTACCGCGACGGG-AGGATTCCCGGCAGGGACGAGAAATACGTGTACGTCTTGCCGCTGT
. : . : . : . : . : . :
rJMFF003E23- TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
rJMFF027P21- TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
rJMFF027F08- TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
JMFN014E18+ TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
JMFF027F08+ TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
JMFF027P21+ TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
____________________________________________________________
consensus TCATGTTTTCGGTGCAATTAAGGATGACGATGTCGCGAAAGCGCAGGATTTCTAGGGCTA
. : . : . : . : . : . :
rJMFF003E23- CGAACGCCCGCTGGGCCTCGCC
rJMFF027P21- CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
rJMFF027F08- CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
JMFN014E18+ CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
JMFF027F08+ CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
JMFF003E23+ G
JMFF027P21+ CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
____________________________________________________________
consensus CGAACGCCCGCTGGGCCTCGCCGGAGAGGTTGCAGAGTATGAACTTCACGTCGACGCGGG
. : . : . : . : . : . :
rJMFF027P21- CGAGAGAGGTGGACTGGATGCCG
rJMFF027F08- CGAGAGAGGTGGACTGGATGCCGTANATGAGGCGGAGGAAATGACNGCGGTCGTACTTTT
JMFN014E18+ CGAGAGAGGTGGACTGGATGCCGTAGATGAGGCGGAGGAAATGACGGCGGTCGTACTTTT
JMFF027F08+ CGAGAGAGGTGGACTGGATGCCGTAGATGAGGCGGAGGAAATGACGGCGGTCGTACTTTT
JMFF003E23+ CGAGAGAGGTGGACTGGATGCCGTAGATGAGGCGGAGGAAATGACGGCGGTCGTACTTTT
JMFF027P21+ CGAGAGAGGTGGACTGGATGCCGTAGATGAGGCGGAGGAAATGACGGCGGTCGTACTTTT
____________________________________________________________
consensus CGAGAGAGGTGGACTGGATGCCGTAGATGAGGCGGAGGAAATGACGGCGGTCGTACTTTT
. : . : . : . : . : . :
rJMFF027F08- CC
JMFN014E18+ CCGGCCGGGTGAAGATCCCTATCAGGAGACTGAATCTTGCATGGGAATCTGCAGGCACGA
JMFF027F08+ CCGGCCGGGTGAAGATCCCTATCAGGAGACTGAATCTTGCATGGGAATCTGCAGGCACGA
JMFF003E23+ CCGGCCGGGTGAAGATCCCTATCAGGAGACTGAATCTTGCATGGGAATCTGCAGGCACGA
JMFF027P21+ CCGGCCGGGTGAAGATCCCTATCAGGAGACTGAATCTTGCATGGGAATCTGCAGGCACGA
____________________________________________________________
consensus CCGGCCGGGTGAAGATCCCTATCAGGAGACTGAATCTTGCATGGGAATCTGCAGGCACGA
. : . : . : . : . : . :
JMFN014E18+ TATTAATGGCGATTTCATCATTTGGGGTTCTAAGCGGAGAATTTGAGTTTGTGCTAAACA
JMFF027F08+ TATTAATGGCGATTTCATCATTTGGGGTTCTAAGCGGAGAATTTGAGTTTGTGCTAAACA
JMFF003E23+ TATTAATGGCGATTTCATCATTTGGGGTTCTAAGCGGAGAATTTGAGTTTGTGCTAAACA
JMFF027P21+ TATTAATGGCGATTTCATCATTTGGGGTTCTAAGCGGAGAATTTGAGTTTGTGCTAAACA
____________________________________________________________
consensus TATTAATGGCGATTTCATCATTTGGGGTTCTAAGCGGAGAATTTGAGTTTGTGCTAAACA
. : . : . : . : . : . :
JMFN014E18+ TGATTAAGAATACTAAGAGGAAAATGGCAAGCAGTGACAAAGAAGCTAGAAGTGATTGCC
JMFF027F08+ TGATTAAGAATACTAAGAGGAAAATGGCAAGCAGTGACAAAGAAGCTAGAAGTGATTGCC
JMFF003E23+ TGATTAAGAATACTAAGAGGAAAATGGCAAGCAGTGACAAAGAAGCTAGAAGTGATTGCC
JMFF027P21+ TGATTAAGAATACTAAGAGGAAAATGGCAAGCAGTGACAAAGAAGCTAGAAGTGATTGCC
____________________________________________________________
consensus TGATTAAGAATACTAAGAGGAAAATGGCAAGCAGTGACAAAGAAGCTAGAAGTGATTGCC
. : . : . : . : . : . :
JMFN014E18+ TCCC
JMFF027F08+ TCCCTAACATCCTTAAATTTTCTAGAATTATTCATAAATATTCCTGTAAACATGAATACT
JMFF003E23+ TCCCTAACATCCTTAAATTTTCTAGAATTATTCATAAATATTCCTGTAAACATGAATACT
JMFF027P21+ TCCCTAACATCCTTAAATTTTCTAGAATTATTCATAAATATTCCTGTAAACATGAATACT
____________________________________________________________
consensus TCCCTAACATCCTTAAATTTTCTAGAATTATTCATAAATATTCCTGTAAACATGAATACT
. : . : . : . : . : . :
JMFF027F08+ TAAACATATGGTAGTTCGATCCTAAAAAAATAAAATAACTAGTTACTTTTAGCAC
JMFF003E23+ TAAACATATGGTAGTTCGATCCTAAAAAAATAAAATAACTAGTTACTTTTAGCAC
JMFF027P21+ TAAACATATGGTAGTTCGATCCTAAAAAAATAAAATAACTAGTTACTTTTAGCACTTATT
____________________________________________________________
consensus TAAACATATGGTAGTTCGATCCTAAAAAAATAAAATAACTAGTTACTTTTAGCACTTATT