Contig 003185:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF026J12-                                                TTCTTGAATTGATAAATCACTG
                      ____________________________________________________________
consensus                                                   TTCTTGAATTGATAAATCACTG
 
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rJMFF026J12-          CTAAATACACAAATTGCTGTCTTTTGGAAACTTACATCCTAAACATGTCAAGCATTTCAC
                      ____________________________________________________________
consensus             CTAAATACACAAATTGCTGTCTTTTGGAAACTTACATCCTAAACATGTCAAGCATTTCAC
 
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rJMFF026J12-          CAACTCAGCCGCAAGAGTCATTCAAAACCTACAGATATTTTGCAATTTAATCACGACGAC
                      ____________________________________________________________
consensus             CAACTCAGCCGCAAGAGTCATTCAAAACCTACAGATATTTTGCAATTTAATCACGACGAC
 
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rJMFF026J12-          TACATGTGTTAAGACTTCTACCCCCATCTAGTATGATGTGCCCCAAAAAAAATACAAATA
                      ____________________________________________________________
consensus             TACATGTGTTAAGACTTCTACCCCCATCTAGTATGATGTGCCCCAAAAAAAATACAAATA
 
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rJMFF026J12-          AAATAAGTTACATGTCTACAACAGATGAACCCTGTCTTCAAAATTACACCATCCAAATAT
                      ____________________________________________________________
consensus             AAATAAGTTACATGTCTACAACAGATGAACCCTGTCTTCAAAATTACACCATCCAAATAT
 
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rJMFF026J12-          CAGCAGCAATATCATCCATCATAAATAAAACATAAAAAGACCTAAATTCATGCATGTTTT
                      ____________________________________________________________
consensus             CAGCAGCAATATCATCCATCATAAATAAAACATAAAAAGACCTAAATTCATGCATGTTTT
 
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rJMFF026J12-          GCGGTTTCACTTCAATGTCTAAGTAGAAAAGAGGGGTTTTGTGTCTCGAGTGTTTGTTCT
                      ____________________________________________________________
consensus             GCGGTTTCACTTCAATGTCTAAGTAGAAAAGAGGGGTTTTGTGTCTCGAGTGTTTGTTCT
 
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rJMFF026J12-          AGTATCTTCAAATTGGACCTATACCCGGTTAATTTGATGTCCTCTATGTTCTGCATGGGC
                      ____________________________________________________________
consensus             AGTATCTTCAAATTGGACCTATACCCGGTTAATTTGATGTCCTCTATGTTCTGCATGGGC
 
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rJMFF026J12-          ATGAGTTCTTGGATGTCATGAAACTATGGATGGATCATGTTGAACTGGAACCGAGACAGC
                      ____________________________________________________________
consensus             ATGAGTTCTTGGATGTCATGAAACTATGGATGGATCATGTTGAACTGGAACCGAGACAGC
 
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rJMFF026J12-          TGCTGTGGAATTGTGGATATGACAGGTCCATATCTCTGAACATTGTCATAGAGTTCAAAC
JMFN025E16+                                                  ACATTGTCATAGAGTCGAATC
JMFN017C13+                            TATGACAGGTCCATATCTCTGAACATTGTCATAGAGTTCAAAC
                      ____________________________________________________________
consensus             TGCTGTGGAATTGTGGATATGACAGGTCCATATCTCTGAACATTGTCATAGAGTTCAAAC
 
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rJMFF026J12-          AATGGCACAGCAAGAAGTTTCAAGTTTTTGGGGACAGCAAAGTACTCTCTCTCAGACAGA
JMFN025E16+           AATGGCGCAGCAAGAAGTATCAAGTTTCTGGGGACAGCAAAGTACTCTGTGTCAGACAGA
JMFN017C13+           AATGGCACAGCAAGAAGTTTCAAGTTT-TGGGGACAGCAAAGTACTCTCTCTCAGACAGA
                      ____________________________________________________________
consensus             AATGGCACAGCAAGAAGTTTCAAGTTTTTGGGGACAGCAAAGTACTCTCTCTCAGACAGA
 
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rJMFF026J12-          TGAACCAGGAAGAGCTTTTTGCACTCCTTAGGTTTTGTTATGTGTGGGGGGCAATATGGA
JMFN025E16+           TGAACCAGGAAGAGCTTCTTGCACTCCTTAGGTTTAGCTATGCGTGGGGGGCAATATGGA
JMFN017C13+           TGAACCAGGAAGAGCTTTTTGCACTCCTTAGGTTTTGTTATGTGTGGGGGGCAATATGGA
JMFF026J12+                                      TTAGGTTTTGTTATGTGTGGGGGGCAATATGGA
                      ____________________________________________________________
consensus             TGAACCAGGAAGAGCTTTTTGCACTCCTTAGGTTTTGTTATGTGTGGGGGGCAATATGGA
 
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rJMFF026J12-          TACATGATTGTTTCAAAATTTGGCCTCCACCAGATGGCCACACATTCTCCAATCTGCCAA
JMFN025E16+           TACATGATGGCTTCAAATTTCGGCCTCCACCAGATGGCCACTCATTCTCCAATGTGCCAA
JMFN017C13+           TACATGATTGTTTCAAAATTTGGCCTCCACCAGATGGCCACACATTCTCCAATCTGCCAA
JMFF026J12+           TACATGATTGTTTCAAAATTTGGCCTCCACCAGATGGCCACACATTCTCCAATCTGCCAA
                      ____________________________________________________________
consensus             TACATGATTGTTTCAAAATTTGGCCTCCACCAGATGGCCACACATTCTCCAATCTGCCAA
 
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rJMFF026J12-          TCTGGCTGAACAGCGGAATTATTANCTGCAAGT                           
JMFN025E16+           TCTGGCTGAACAGCGGAATTATTAACTGCAAGTCTGCTGGAGAGTTTCCTTTTCAACCCC
JMFN017C13+           TCTGGCTGAACAGCGGAATTATTAGCTGCAAGTTTGCTGGAGAGTTTCCTTTTCAACCCC
JMFF026J12+           TCTGGCTGAACAGCGGAATTATTAGCTGCAAGTTTGCTGGAGAGTCTCCTTTTCAACCCC
                      ____________________________________________________________
consensus             TCTGGCTGAACAGCGGAATTATTAGCTGCAAGTTTGCTGGAGAGTTTCCTTTTCAACCCC
 
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JMFN025E16+           TCAATTTCATTCTCTACAGGATTCAAGCGCCCACCAGGAAGTTTGCAAAAAGTGTTCCCA
JMFN017C13+           TCAATTTCATTCTCTCCAGGCTTCAAGCGCCCACCAGGAAGTTTGCAAAAAGTGTTCCCA
JMFF026J12+           TCAATTTCATTCTCTCCAGGCTTCAAGCGCCCACCAGGAAGTTTGCAAAAAGTGTTCCCA
                      ____________________________________________________________
consensus             TCAATTTCATTCTCTCCAGGCTTCAAGCGCCCACCAGGAAGTTTGCAAAAAGTGTTCCCA
 
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JMFN025E16+           ATTTGAAGAACAAGAATATGAGGATGATTATGCTCTTGTACCAACAAAATTCCTTCAACA
JMFN017C13+           ATTTGAAGAAGAAGAATATGAGGATGATTATGCTCTTGTACCAACAAAATTCCTTCAACA
JMFF026J12+           ATTTGAAGAAGAAGAATATGAGGATGATTATGCTCTTGTACCAACAAAATTCCTTCAACA
                      ____________________________________________________________
consensus             ATTTGAAGAAGAAGAATATGAGGATGATTATGCTCTTGTACCAACAAAATTCCTTCAACA
 
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JMFN025E16+           TCTAGTCCTCATTCCCTCCTTCATGTAATTGACTTTCATGCGAGCAAGGCGATCGGCGCC
JMFN017C13+           -CTAGTCCTCATTCCCTCCTTCATGTAATTGACTTTCATGCGAGCAAGGCGATCGGCGAC
JMFF026J12+           -CTAGTCCTCATTCCCTCCTTCATGTAATTGACTTTCATGCGAGCAAGGCGATCGGCGAC
                      ____________________________________________________________
consensus             -CTAGTCCTCATTCCCTCCTTCATGTAATTGACTTTCATGCGAGCAAGGCGATCGGCGAC
 
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JMFN025E16+           GGAGGTGTCCTTTTCCATATTAGGCTCTTTGGTGCCGAAGCTGTAGCTGGCTAGAGGATA
JMFN017C13+           GGAGGTGTCCTTTTCCATCTTCGGCTCTTTGGTGCCGAAGCTGTAGCTGGCTAGAGGATA
JMFF026J12+           GGAGGTGTCCTTTTCCATCTTCGGCTCTTTGGTGCCGAAGCTGTAGCTGGCTAGAGGATA
                      ____________________________________________________________
consensus             GGAGGTGTCCTTTTCCATCTTCGGCTCTTTGGTGCCGAAGCTGTAGCTGGCTAGAGGATA
 
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JMFN025E16+           TGTGCTCACCACCGGCGCCGTTATCATCTGTGCAAACTCTCCCATTTATATCCATAGACC
JMFN017C13+           TGTGTTCACCACCGGCGACGTTATCATCTCTGCTAACTCTCCCCTTTTTCTCCGTAGACC
JMFF026J12+           TGTGTTCACCACCGGCGACGTTATCATCTCTGCTAACTCTCCCCTTTTTCTCCGTAGACC
                      ____________________________________________________________
consensus             TGTGTTCACCACCGGCGACGTTATCATCTCTGCTAACTCTCCCCTTTTTCTCCGTAGACC
 
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JMFN025E16+           GGCGAGATATTCAGATGATTTCTCT                                   
JMFN017C13+           GGCGAGATTTTCAGCTGATTTCTCTTTCTATAATTCCGATGTGGCC              
JMFF026J12+           GGCGAGATTTTCAGCTGATTTCTCTTTCTATAATTCCGATGTGGCCGGAGAGGACCCAAG
                      ____________________________________________________________
consensus             GGCGAGATTTTCAGCTGATTTCTCTTTCTATAATTCCGATGTGGCCGGAGAGGACCCAAG