Contig 003184:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026J01Sequence496003184 (3)ref|XP_004238930.1|128PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum]246005510 (2)
JMFF044A22Sequence621003184 (3)ref|XP_004250038.1|8e-28PREDICTED: uncharacterized protein LOC101264582 isoform X2 [Solanum lycopersicu537005510 (2)ref|XP_007044341.1|6e-07Uncharacterized protein TCM_009867 [Theobroma cacao] gb|EOY00173.1| Uncharacteri
JMFN043N05Sequence582003184 (3)ref|XP_004238930.1|173PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF044A22+                                          TGATTTGAACCGACATGATTTACTTAGAT
                      ____________________________________________________________
consensus                                            TGATTTGAACCGACATGATTTACTTAGAT
 
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JMFF044A22+           TGGTTGGTCTTTTGACTTGGTAATCATGTTACAAGTTAAACTCCTAATAGGAGCGGCCTA
                      ____________________________________________________________
consensus             TGGTTGGTCTTTTGACTTGGTAATCATGTTACAAGTTAAACTCCTAATAGGAGCGGCCTA
 
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JMFF044A22+           TCGACCTTAGTTTGAACCGACCGGATTTAGCTCGTGTACTCAAATAGTGATTGCGAATTT
                      ____________________________________________________________
consensus             TCGACCTTAGTTTGAACCGACCGGATTTAGCTCGTGTACTCAAATAGTGATTGCGAATTT
 
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JMFN043N05+                                                                  CCTTT
JMFF044A22+           TTCTCCTAACTAAACATAACCCCTAACATGGATCTAAGTATATGATTGCAAAATACCTTT
JMFF026J01+                                                                  CCTTT
                      ____________________________________________________________
consensus             TTCTCCTAACTAAACATAACCCCTAACATGGATCTAAGTATATGATTGCAAAATACCTTT
 
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JMFN043N05+           GTGAGGATGATGTTCAGAAGATCGGATCCAGATCTGGAATCACAAACATCTTGCTGATGG
JMFF044A22+           GTGAGGATGATGTTCAGAAGATCGGATCCAGATCTGGAATCACAAACATCTTGCTGATGG
JMFF026J01+           GTGAGGATGATGTTCAGAAGATCGGATCCAGATCTGGAATCACAAACATCTTGCTGATGG
                      ____________________________________________________________
consensus             GTGAGGATGATGTTCAGAAGATCGGATCCAGATCTGGAATCACAAACATCTTGCTGATGG
 
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JMFN043N05+           CTGATATGCCACCGGAGAGATCTGATAGGGTCGTTGACGGCGGCGTTGAGGCCGAGACGG
JMFF044A22+           CTGATATGCCACCGGAGAGATCTGATAGGGTCGTTGACGGCGGCGTTGAGGCCGAGACGG
JMFF026J01+           CTGATATGCCNCCGGAGAGATNTGATAGGGTCGTTGACGGCGGCGTTGAGGCCGAGACGG
                      ____________________________________________________________
consensus             CTGATATGCCACCGGAGAGATCTGATAGGGTCGTTGACGGCGGCGTTGAGGCCGAGACGG
 
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JMFN043N05+           CGAGGCTTAGGGCACACCACGGCGTTTCTCTTATCGGAAATCGAGCTCCTCTTCTCTTCG
JMFF044A22+           CGAGGCTTAGGGCACACCACGGCGTTTCTCTTATCGGAAATCGAGCTCCTCTTCTCTTCG
JMFF026J01+           CGAGGCTTAGGGCACACCNCGGCGTTTCTCTTATCGGAAATCGAGCTCCTCTTCTCTTCG
                      ____________________________________________________________
consensus             CGAGGCTTAGGGCACACCACGGCGTTTCTCTTATCGGAAATCGAGCTCCTCTTCTCTTCG
 
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JMFN043N05+           CAGGCAACGAAACCGCTTTGCTGAACCGGAAAGTGATTCATATTTTTTAAAATTTTTTTT
JMFF044A22+           CAGGCAACGAAACCGCTTTGCTGAACCGGAAAGTGATTCATATTTTTTAAAATTTTTTTT
JMFF026J01+           CAGGCAACGAAACCGCTTTGCTGAACCGGAAAGTGATTCATATTTTTTAAAATTTTTTTT
                      ____________________________________________________________
consensus             CAGGCAACGAAACCGCTTTGCTGAACCGGAAAGTGATTCATATTTTTTAAAATTTTTTTT
 
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JMFN043N05+           TTCTTTATTCCTTTGAGATAATTACAAGATGTATAGGAACAACGAAACAAAAACCTGGGC
JMFF044A22+           TTCTTTATTCCTTTGAGATAATTACAAGATGTATAGGAACAACGAAACAAAAACCTGGGC
JMFF026J01+           TTCTTTATTCCTTTGAGATAATTACAAGATGTATAGGAACAACGAAACAAAAACCTGGGC
                      ____________________________________________________________
consensus             TTCTTTATTCCTTTGAGATAATTACAAGATGTATAGGAACAACGAAACAAAAACCTGGGC
 
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JMFN043N05+           GAGCTGTACAAAAGTGTATGGTAAGGCTACAAGGGAAAGGAGAAATTCAAAACATGAAGG
JMFF044A22+           GAGCTGTACAAAAGTGTATGGTAAGGCTACAAGGGAAAGGAGAAATTCAAAACATGAAGG
JMFF026J01+           GAGCTGTACAAAAGTGTATGGTAAGGCTACAAGGGAAAGGAGAAATTCAAAACATGAAGG
                      ____________________________________________________________
consensus             GAGCTGTACAAAAGTGTATGGTAAGGCTACAAGGGAAAGGAGAAATTCAAAACATGAAGG
 
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JMFN043N05+           GACAGAATTGCAGACAGGGAA                                       
JMFF044A22+           GACAGAATTGCAGACAGGGAAGAGAGAAAAAAGGGTCAGTTTT                 
JMFF026J01+           GACAGAATTGCAGACAGGGAAGAGAGAAAAAAGGGTCAGTTTTTGACAAGAGTAAAGAAG
                      ____________________________________________________________
consensus             GACAGAATTGCAGACAGGGAAGAGAGAAAAAAGGGTCAGTTTTTGACAAGAGTAAAGAAG