Contig 003177:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F13Sequence190003177 (3)
JMFS058D09Sequence637003177 (3)ref|XP_006345392.1|7e-68PREDICTED: protein transport protein Sec31A-like [Solanum tuberosum]
JMFS159B06Sequence385003177 (3)ref|XP_006345392.1|4e-47PREDICTED: protein transport protein Sec31A-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS058D09+                     CATCAGCACCAGAAGCAAGGAGATTCGGAGTAAAAGCATTAAATTCCAAT
                      ____________________________________________________________
consensus                       CATCAGCACCAGAAGCAAGGAGATTCGGAGTAAAAGCATTAAATTCCAAT
 
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JMFS058D09+           CCATGAACAGGCCCACTATGCTTTGAAAGGTGACCAACAAAGGCATTTTCAGTAGCTTCA
                      ____________________________________________________________
consensus             CCATGAACAGGCCCACTATGCTTTGAAAGGTGACCAACAAAGGCATTTTCAGTAGCTTCA
 
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JMFS159B06+                                             GCCTGGGATTCCACAGCCCAATGTGG
JMFS058D09+           GTGCCAGTTTGATTTGCACCAGAGGAGATCAGAGGCCTGGGATTCCACAGCCCAATGTGG
                      ____________________________________________________________
consensus             GTGCCAGTTTGATTTGCACCAGAGGAGATCAGAGGCCTGGGATTCCACAGCCCAATGTGG
 
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JMFS159B06+           CCATCAACAAGCCCACCCGCGATGAGCCCGAGAGAAAACTGCTCGGAATTCGGAAGAGCC
JMFS058D09+           CCATCAACAAGCCCACCCGCGATGAGCCCGAGAGAAAACTGCTCGGAATTCGGAAGAGCC
                      ____________________________________________________________
consensus             CCATCAACAAGCCCACCCGCGATGAGCCCGAGAGAAAACTGCTCGGAATTCGGAAGAGCC
 
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JMFS159B06+           TTCCCCCAAGACAACCGGTTGAAGCGCTCGGAGCTGGTAACCGAGCCGGCCAAAATGAGC
JMFS058D09+           TTCCCCCAAGACAACCGGTTGAAGCGCTCGGAGCTGGTAACCGAGCCGGCCAAAATGAGC
                      ____________________________________________________________
consensus             TTCCCCCAAGACAACCGGTTGAAGCGCTCGGAGCTGGTAACCGAGCCGGCCAAAATGAGC
 
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JMFS159B06+           TGCTGATCATCTGATCCGAAGTCGAGCTTGAAAATGTCGAGGTTGGCCGAGGAGCTGAAT
JMFS058D09+           TGCTGATCATCTGATCCGAAGTCGAGCTTGAAAATGTCGAGGTTGGCCGAGGAGCTGAAT
                      ____________________________________________________________
consensus             TGCTGATCATCTGATCCGAAGTCGAGCTTGAAAATGTCGAGGTTGGCCGAGGAGCTGAAT
 
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JMFS159B06+           GACAGATCCACCGCCCCCGCCATCGTCCCGGCCGCCAAGTACGGCCCCTCCGGCGCAAAG
JMFS058D09+           GACAGATCCACCGCCCCCGCCATCGTCCCGGCCGCCAAGTACGGCCCCTCCGGCGCAAAG
                      ____________________________________________________________
consensus             GACAGATCCACCGCCCCCGCCATCGTCCCGGCCGCCAAGTACGGCCCCTCCGGCGCAAAG
 
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JMFS159B06+           GACGCCGAGGCCGATCGATTGACAACCTTCACAAACGCCATGCCTCACC           
JMFS058D09+           GACGCCGAGGCCGATCGATTGACAACCTTCACAAACGCCATGCCTCACCCAATCTATCCA
                      ____________________________________________________________
consensus             GACGCCGAGGCCGATCGATTGACAACCTTCACAAACGCCATGCCTCACCCAATCTATCCA
 
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JMFS058D09+           ACTCTATACAAATTCGTGCCCGTTGGCACAACCCAATCTTAGGGTTTAATAGGATCGGGC
                      ____________________________________________________________
consensus             ACTCTATACAAATTCGTGCCCGTTGGCACAACCCAATCTTAGGGTTTAATAGGATCGGGC
 
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JMFS058D09+           GCACCCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTTTATGCTCTCTCTTAT
JMFF025F13+                                                    TGTTTATGCTCTCTCTTAT
                      ____________________________________________________________
consensus             GCACCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTATGCTCTCTCTTAT
 
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JMFS058D09+           TCAAATTCTTTACGGATTTCCGATTTCACTTTCACTCTCTCCCCGT              
JMFF025F13+           TCAAATTCTTTACGGATTTCCGATTTCACTTTCACTCTCTCCCCGTCTGTTACTCTCATC
                      ____________________________________________________________
consensus             TCAAATTCTTTACGGATTTCCGATTTCACTTTCACTCTCTCCCCGTCTGTTACTCTCATC