| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019O21 | Sequence | 583 | 003173 (5) | ref|NP_001289513.1| | 1e-75 | 4-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate | 655 | 011193 (3) | gb|KDO81878.1| | 1e-79 | hypothetical protein CISIN_1g0398371mg, partial [Citrus sinensis] |
| JMFF024K12 | Sequence | 462 | 003173 (5) | ref|NP_001289513.1| | 9e-58 | 4-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate | 786 | 011193 (3) | ref|XP_002514904.1| | 7e-100 | AMP dependent CoA ligase, putative [Ricinus communis] gb|EEF47458.1| AMP depende |
| JMFF047A17 | Sequence | 482 | 003173 (5) | ref|NP_001289513.1| | 1e-57 | 4-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate | 335 | 011193 (3) | gb|KDO81878.1| | 4e-11 | hypothetical protein CISIN_1g0398371mg, partial [Citrus sinensis] |
| JMFN032M04 | Sequence | 627 | 003173 (5) | ref|NP_001289513.1| | 5e-87 | 4-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate | |||||
| JMFS021F01 | Sequence | 612 | 003173 (5) | ref|NP_001289513.1| | 3e-86 | 4-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate | |||||
This contig is upended
. : . : . : . : . : . :
JMFS021F01+ GCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
JMFN032M04+ TCGTGCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
____________________________________________________________
consensus TCGTGCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
. : . : . : . : . : . :
JMFS021F01+ CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
JMFN032M04+ CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
JMFF019O21+ CTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
____________________________________________________________
consensus CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
. : . : . : . : . : . :
JMFS021F01+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
JMFN032M04+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
JMFF047A17+ CGG
JMFF019O21+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
____________________________________________________________
consensus CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
. : . : . : . : . : . :
JMFS021F01+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFN032M04+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF047A17+ AAGCCCCAAATCTTTCACC-TGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF019O21+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF024K12+ CTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
____________________________________________________________
consensus AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
. : . : . : . : . : . :
JMFS021F01+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFN032M04+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF047A17+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF019O21+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF024K12+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
____________________________________________________________
consensus TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
. : . : . : . : . : . :
JMFS021F01+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFN032M04+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF047A17+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF019O21+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF024K12+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
____________________________________________________________
consensus GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
. : . : . : . : . : . :
JMFS021F01+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFN032M04+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF047A17+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF019O21+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF024K12+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
____________________________________________________________
consensus CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
. : . : . : . : . : . :
JMFS021F01+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFN032M04+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF047A17+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF019O21+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF024K12+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
____________________________________________________________
consensus CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
. : . : . : . : . : . :
JMFS021F01+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFN032M04+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF047A17+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF019O21+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF024K12+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
____________________________________________________________
consensus AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
. : . : . : . : . : . :
JMFS021F01+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFN032M04+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF047A17+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF019O21+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF024K12+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
____________________________________________________________
consensus ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
. : . : . : . : . : . :
JMFS021F01+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAA
JMFN032M04+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCA
JMFF047A17+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
JMFF019O21+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
JMFF024K12+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
____________________________________________________________
consensus AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT