Contig 003170:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023D18Sequence442003170 (3)gb|KJB12086.1|4e-78hypothetical protein B456_002G227600 [Gossypium raimondii]732003170 (3)ref|XP_009766444.1|6e-129PREDICTED: S-formylglutathione hydrolase [Nicotiana sylvestris]
JMSF045B05Sequence774003170 (3)ref|XP_009766444.1|1e-157PREDICTED: S-formylglutathione hydrolase [Nicotiana sylvestris]678010258 (5)ref|XP_009593308.1|5e-67PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF023D18-                                        AATTCACACAACCACAAATGGCTTTATTAC
                      ____________________________________________________________
consensus                                           AATTCACACAACCACAAATGGCTTTATTAC
 
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rJMFF023D18-          GAGAACTACTCTCGCGACATTTCTGTCTTACTTTCTCCCAGTAGGACACAGATTCTATAT
                      ____________________________________________________________
consensus             GAGAACTACTCTCGCGACATTTCTGTCTTACTTTCTCCCAGTAGGACACAGATTCTATAT
 
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rJMFF023D18-          GAACACCACTCCTGAAGCATCTCTGAGATTAAGTAAATGCTTTGCCCAGTTACAGCTGAA
                      ____________________________________________________________
consensus             GAACACCACTCCTGAAGCATCTCTGAGATTAAGTAAATGCTTTGCCCAGTTACAGCTGAA
 
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rJMFF023D18-          GGGCTTGGGAGTGATGGCGGATGTGATCATCGACGAAGGTGGAAATGAAAAAGTAGGAGT
                      ____________________________________________________________
consensus             GGGCTTGGGAGTGATGGCGGATGTGATCATCGACGAAGGTGGAAATGAAAAAGTAGGAGT
 
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rJMFF023D18-          GATCATATCCAGGCTGCAATCGCAGGAGGAGAGGAACGCTGGCTTTTCTACATGCCTCTT
JMSF045B05+                                                                    CTT
                      ____________________________________________________________
consensus             GATCATATCCAGGCTGCAATCGCAGGAGGAGAGGAACGCTGGCTTTTCTACATGCCTCTT
 
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rJMFF023D18-          CGAATTTATGTGGCAAAAGTTGATCCTTCAAGAATTTGTCATCTTCTCCCTGATCAATTA
JMSF045B05+           CGAATTTATGTGGCAAAAGTTGATCCTTCAAGAATTTGTCATCTTCTCCCTGATCAATTA
                      ____________________________________________________________
consensus             CGAATTTATGTGGCAAAAGTTGATCCTTCAAGAATTTGTCATCTTCTCCCTGATCAATTA
 
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rJMFF023D18-          AAATGGTGGCGGAGAGATTGGCACCGCTTGATATAAGGCAGGTAGCATCGTATTGCTCCC
JMSF045B05+           AAATGGTGGCGGAGAGATTGGCACCGCTTGATATAAGGCAGGTAGCATCGTATTGCTCCC
                      ____________________________________________________________
consensus             AAATGGTGGCGGAGAGATTGGCACCGCTTGATATAAGGCAGGTAGCATCGTATTGCTCCC
 
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rJMFF023D18-          AATCAGCTTTATTTTCACCCAAGTAGTTTGTGAAAGCCTTCTGGCCCCAAGGACAGTTCA
JMSF045B05+           AATCAGCTTTATTTTCACCCAAGTAGTTTGTGAAAGCCTTCTGGCCCCAAGGACAGTTCA
                      ____________________________________________________________
consensus             AATCAGCTTTATTTTCACCCAAGTAGTTTGTGAAAGCCTTCTGGCCCCAAGGACAGTTCA
 
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rJMFF023D18-          CAGGATTCACAATTGGAGCAAATGCTGACACTGACTTGTACTTGTCCAAGTTTTTGAGGT
JMSF045B05+           CAGGATTCACAATTGGAGCAAATGCTGACACTGACTTGTACTTGTCCAAGTTTTTGAGGT
                      ____________________________________________________________
consensus             CAGGATTCACAATTGGAGCAAATGCTGACACTGACTTGTACTTGTCCAAGTTTTTGAGGT
 
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rJMFF023D18-          AGATTGTTAGTGCTCCATGTCCACCCATTGAGTGACCAAAGATGGATGCCCTTGATGTAT
JMSF045B05+           AGATTGTTAGTGCTCCATGTCCACCCATTGAGTGACCAAAGATGGATGCCCTTGATGTAT
                      ____________________________________________________________
consensus             AGATTGTTAGTGCTCCATGTCCACCCATTGAGTGACCAAAGATGGATGCCCTTGATGTAT
 
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rJMFF023D18-          CAAGCTGTGGAAAGTGTTCAGAAAGAAGTCCTGGCAACTCCTTAACAACATAGTCATACA
JMSF045B05+           CAAGCTGTGGAAAGTGTTCAGAAAGAAGTCCTGGCAACTCCTTAACAACATAGTCATACA
JMFF023D18+                                                 TCCTTAACAACATAGTCATACA
                      ____________________________________________________________
consensus             CAAGCTGTGGAAAGTGTTCAGAAAGAAGTCCTGGCAACTCCTTAACAACATAGTCATACA
 
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rJMFF023D18-          TACGCCAGTTCTTCCACTTCTCTTGGGTTGCATTCAGATAAAATCCAGCACCAACACCAA
JMSF045B05+           TACGCCAGTTCTTCCACTTCTCTTGGGTTGCATTCAGATAAAATCCAGCACCAACACCAA
JMFF023D18+           TACGCCAGTTCTTCCACTTCTCTTGGGTTGCATTCAGATAAAATCCAGCACCAACACCAA
                      ____________________________________________________________
consensus             TACGCCAGTTCTTCCACTTCTCTTGGGTTGCATTCAGATAAAATCCAGCACCAACACCAA
 
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rJMFF023D18-          AATCCCAGCTATCAGACTCTCCTTCAACATTCAGCCCTCTTG                  
JMSF045B05+           AATCCCAGCTATCAGACTCTCCTTCAACATTCAGCCCTCTTGGAGATGTATCTGGTGCAA
JMFF023D18+           AATCCCAGCTATCAGACTCTCCTTCAACATTCAGCCCTCTTGGAGATGTATCTGGTGCAA
                      ____________________________________________________________
consensus             AATCCCAGCTATCAGACTCTCCTTCAACATTCAGCCCTCTTGGAGATGTATCTGGTGCAA
 
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JMSF045B05+           TCAGTGCAACGCCCTCACTTGAAGCAACACGTTGGGCACCAGATTTAGCGATAAAGTTCT
JMFF023D18+           TCAGTGCAACGCCCTCACTTGAAGCAACACGTTGGGCACCAGATTTAGCGATAAAGTTCT
                      ____________________________________________________________
consensus             TCAGTGCAACGCCCTCACTTGAAGCAACACGTTGGGCACCAGATTTAGCGATAAAGTTCT
 
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JMSF045B05+           CATCTGTGCATGTTAGGCCGGAGAGCCAGTAGAGTACAGGGAATTTGTTGGAAGGTGAAG
JMFF023D18+           CATCTGTGCATGTTAGGCCGGAGAGCCAGTAGAGTACAGGGAATTTGTTGGAAGGTGAAG
                      ____________________________________________________________
consensus             CATCTGTGCATGTTAGGCCGGAGAGCCAGTAGAGTACAGGGAATTTGTTGGAAGGTGAAG
 
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JMSF045B05+           GAGAAGGAGGGAAGTAGATGTGGAATGTCATGGAGCATCCAAGAGTTGGGCTGTAGTGCT
JMFF023D18+           GAGAAGGAGGGAAGTAGATGTGGAATGTCATGGAGCATCCAAGAGTTGGGCTGTAGTGCT
                      ____________________________________________________________
consensus             GAGAAGGAGGGAAGTAGATGTGGAATGTCATGGAGCATCCAAGAGTTGGGCTGTAGTGCT
 
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JMSF045B05+           TGTATCTCTTGTTGAACCCTCCAAACATCTTCGAGCTGCTGATTTCTGAAGGCTTCGTCT
JMFF023D18+           TGTATCTCTTGTTGAACCCTCCAAACATCTTCGAGCTGCTGATTTCTGAAGGCTTCGTCT
                      ____________________________________________________________
consensus             TGTATCTCTTGTTGAACCCTCCAAACATCTTCGAGCTGCTGATTTCTGAAGGCTTCGTCT
 
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JMSF045B05+           CCATCTCCACCGTATCGCCGACACACTTCACAGTACAGAGTGAAAGGTTT          
JMFF023D18+           CCATCTCCACCGTATCGCCGACACACTTCACAGTACAGAGTGAAAGGTTTGGGGTGAGAC
                      ____________________________________________________________
consensus             CCATCTCCACCGTATCGCCGACACACTTCACAGTACAGAGTGAAAGGTTTGGGGTGAGAC