Contig 003165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007O21Sequence563003165 (2)gb|AGG79244.1|7e-98auxin efflux facilitator PIN1b [Nicotiana tabacum]707010983 (3)gb|AIF28293.1|2e-101PIN-like protein, partial [Persea borbonia]
JMFF022H06Sequence501003165 (2)ref|XP_009783366.1|5e-81PREDICTED: probable auxin efflux carrier component 1c [Nicotiana sylvestris]700010983 (3)gb|AIF28293.1|2e-101PIN-like protein, partial [Persea borbonia]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF007O21+ TGAACTCAAACATGAACAGCATC
                      ____________________________________________________________
consensus TGAACTCAAACATGAACAGCATC
 
. : . : . : . : . : . :
JMFF007O21+ AAGGTGTACCAGATGATGCACTGCAGCACAACAATCTGAACCATTAGGCTCCCAGAGAAA
JMFF022H06+ ACCATTAGGCTCCCAGAGAAA
                      ____________________________________________________________
consensus AAGGTGTACCAGATGATGCACTGCAGCACAACAATCTGAACCATTAGGCTCCCAGAGAAA
 
. : . : . : . : . : . :
JMFF007O21+ TCCCCATACATCCCCTTCAGCAAAGGGATGCCCATCACTAGAGTGTTGGGCAGAGTTGAG
JMFF022H06+ TCCCCATACATCCCCTTCAGCAAAGGGATGCCCATCACTAGAGTGTTGGGCAGAGTTGAG
                      ____________________________________________________________
consensus TCCCCATACATCCCCTTCAGCAAAGGGATGCCCATCACTAGAGTGTTGGGCAGAGTTGAG
 
. : . : . : . : . : . :
JMFF007O21+ AGTGAGAACAGAGTTATAGACCACTCCAGGCTCCCCCTTTTGGAGAAATTAGCCCACACA
JMFF022H06+ AGTGAGAACAGAGTTATAGACCACTCCAGGCTCCCCCTTTTGGAGAAATTAGCCCACACA
                      ____________________________________________________________
consensus AGTGAGAACAGAGTTATAGACCACTCCAGGCTCCCCCTTTTGGAGAAATTAGCCCACACA
 
. : . : . : . : . : . :
JMFF007O21+ GCAAGAACCCCAAGAACAATGAGCTTCTGCAGTGTGTCTGCTGCAATGAACCTCAGGTTC
JMFF022H06+ GCAAGAACCCCAAGAACAATGAGCTTCTGCAGTGTGTCTGCTGCAATGAACCTCAGGTTC
                      ____________________________________________________________
consensus GCAAGAACCCCAAGAACAATGAGCTTCTGCAGTGTGTCTGCTGCAATGAACCTCAGGTTC
 
. : . : . : . : . : . :
JMFF007O21+ ATGGTGTATGGATCATTCTCTGCTATGAAATGGAATGAGAGTAAAGGGACAGCAAAGAGA
JMFF022H06+ ATGGTGTATGGATCATTCTCTGCTATGAAATGGAATGAGAGTAAAGGGACAGCAAAGAGA
                      ____________________________________________________________
consensus ATGGTGTATGGATCATTCTCTGCTATGAAATGGAATGAGAGTAAAGGGACAGCAAAGAGA
 
. : . : . : . : . : . :
JMFF007O21+ GCCACAAAACGGTTGATCCCAGAGCACTGGTCTGGGGTGAAAATCTTCCACCATTTCACT
JMFF022H06+ GCCACAAAACGGTTGATCCCAGAGCACTGGTCTGGGGTGAAAATCTTCCACCATTTCACT
                      ____________________________________________________________
consensus GCCACAAAACGGTTGATCCCAGAGCACTGGTCTGGGGTGAAAATCTTCCACCATTTCACT
 
. : . : . : . : . : . :
JMFF007O21+ GACCCATAGGCTAGTATCATGGCCACATACAGTGGAACCATTGCAGTCATGACATGGTAG
JMFF022H06+ GACCCATAGGCTAGTATCATGGCCACATACAGTGGAACCATTGCAGTCATGACATGGTAG
                      ____________________________________________________________
consensus GACCCATAGGCTAGTATCATGGCCACATACAGTGGAACCATTGCAGTCATGACATGGTAG
 
. : . : . : . : . : . :
JMFF007O21+ AAATCTAATAAAGTTATCATCTTTGTTGGTTTTCTTAAATGCCCAGATCAAGAAAACATG
JMFF022H06+ AAATCTAATAAAGTTATCATCTTTGTTGGTTTTCTTAAATGCCCAGATCAAGAAAACATG
                      ____________________________________________________________
consensus AAATCTAATAAAGTTATCATCTTTGTTGGTTTTCTTAAATGCCCAGATCAAGAAAACATG
 
. : . : . : . : . : . :
JMFF007O21+ CAAGGAAGGAAGGGAGAGAGGCAAGGAATGGAAGTTTAAATTGAGGGGAGAGGAAGGAAG
JMFF022H06+ CAAGGAAGGAAGGGAGAGAGGCAAGGAATGGAAGTTTAAATTGAGGGGAGAGGAAGGAAG
                      ____________________________________________________________
consensus CAAGGAAGGAAGGGAGAGAGGCAAGGAATGGAAGTTTAAATTGAGGGGAGAGGAAGGAAG